prot_Ecto-sp13_S_contig198.6413.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig198.6413.1
Unique Nameprot_Ecto-sp13_S_contig198.6413.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: D8LU58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU58_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 6.360e-95
Identity = 138/149 (92.62%), Postives = 141/149 (94.63%), Query Frame = 0
Query:    3 VDIISLCVLAASRILSRNKGRWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDEGGQDSRLDPHVAAAAAAETAAGAAALGHDLDGGMFLPIGGGGTSSALPPLWADASIGDASGGGFLLDSW 151
            VDIISLCVLAASRILSRNKGRWTKDEH+RFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDEGGQD+ LDPHVAAA AAETAAGAAALGHDLDGGMFLP G GG SSAL PLWADAS+GDA GGGF LDSW
Sbjct:   10 VDIISLCVLAASRILSRNKGRWTKDEHERFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDEGGQDTSLDPHVAAAVAAETAAGAAALGHDLDGGMFLPSGSGGASSALAPLWADASVGDADGGGFPLDSW 158          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: A0A6H5JBL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL6_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.650e-46
Identity = 74/80 (92.50%), Postives = 78/80 (97.50%), Query Frame = 0
Query:    3 VDIISLCVLAASRILSRNKGRWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDE 82
            V++ISL VLAASRILSRNKGRWTKDEH+RFL VAGQLGKNKESW+WISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDE
Sbjct:   33 VNVISLGVLAASRILSRNKGRWTKDEHERFLCVAGQLGKNKESWKWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDE 112          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: A0A6H5L659_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L659_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.100e-45
Identity = 104/223 (46.64%), Postives = 112/223 (50.22%), Query Frame = 0
Query:   17 LSRNKGRWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDE--------------------------------------------------------------------------------------------GGQDSRLDPHVAAAAAAETAAGAAALGHDLDGGMFLPIGGGGTSSA----LPPLWADASIGDASG 143
            LSRNKGRWTKDEH+RFLSVAGQLGK  ESW+WIS+ VVTTRSPAQVRTHAQKYF++IGQG PFPDE                                                                                            G QDS LDPHVAAA+A ETAAGAAALGHDLD GMFLP GG G  S+    LPPLW+   IGDASG
Sbjct:   18 LSRNKGRWTKDEHERFLSVAGQLGKTTESWKWISKFVVTTRSPAQVRTHAQKYFQRIGQGRPFPDENEXXXXXXXXXXXXXXXXXXXXXXQIMATPDDARCHSPPSSGLMAVVKVPSVVSLINSYDDCGGFPQAGGIPALPPSLCSPCGLFPGFTPEQGWQDSSLDPHVAAASA-ETAAGAAALGHDLDRGMFLPSGGSGEGSSAPPPLPPLWS--GIGDASG 237          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: D8LU61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU61_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 3.120e-42
Identity = 102/237 (43.04%), Postives = 110/237 (46.41%), Query Frame = 0
Query:   19 RNKGRWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDE------------------------------------------------------------------------------------------------------------GGQDSRLDPHVAAAAAAETAAGAAALGHDLDGGMFLPIGGGGTSSA----LPPLWADASIGDASG 143
            RNKGRWTKDEH+RFLSV GQLGK  ESW+ IS+ VVTTRSPAQVRTHAQKYF++IGQG PFPDE                                                                                                             GQDS LDPHVAAAAA ETAAGAAALGHDLDGGMFLP GG G  S+    LPPLW+D  IGD+SG
Sbjct:    4 RNKGRWTKDEHERFLSVVGQLGKTTESWKLISKFVVTTRSPAQVRTHAQKYFQRIGQGRPFPDEPYADDRLDDGEGHEQNEXXXXXXXXXXXGRSTAAGEAPPPQIKATPDGARCHSPPSSGLMVVVKVPSVVSLINSYDDGGGFPQAGGTPALPPSLCSPCGLFPGFTPKQDGQDSSLDPHVAAAAA-ETAAGAAALGHDLDGGMFLPSGGSGEGSSAAPPLPPLWSD--IGDSSG 237          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: A0A6H5JA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA96_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.520e-33
Identity = 62/72 (86.11%), Postives = 65/72 (90.28%), Query Frame = 0
Query:   80 PDEGGQDSRLDPHVAAAAAAETAAGAAALGHDLDGGMFLPIGGGGTSSALPPLWADASIGDASGGGFLLDSW 151
            P EGGQDS LDPHVAAAAAAETAAGAAALGHDLD GMFLP GGGG +SALPPLWADA +GDA GGGFLL+SW
Sbjct:   83 PGEGGQDSCLDPHVAAAAAAETAAGAAALGHDLDEGMFLPSGGGGGASALPPLWADAGVGDAGGGGFLLESW 154          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: A0A3Q7HA84_SOLLC (Uncharacterized protein n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=A0A3Q7HA84_SOLLC)

HSP 1 Score: 63.5 bits (153), Expect = 4.180e-10
Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    2 NVDIISLCVLAASRILSRNKG-RWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYF 70
            N D +S C+L   +   R KG  WT++EH+RFL    +LGK    WR IS+  VTTR+P QV +HAQKYF
Sbjct:   14 NGDYLSDCLLGQPK--ERRKGVGWTEEEHRRFLMGLEKLGKG--DWRGISRKFVTTRTPTQVASHAQKYF 79          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: UPI000CE1DF32 (probable transcription factor At5g61620 n=2 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1DF32)

HSP 1 Score: 63.2 bits (152), Expect = 6.870e-10
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
Query:   23 RWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYF 70
            RWT++EHK FLS   QLGK+   W+ ISQ  VTT++PAQ+ +HAQKYF
Sbjct:   84 RWTEEEHKLFLSGLNQLGKH--DWKEISQKFVTTKTPAQIASHAQKYF 129          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: A0A0V0H3Y4_SOLCH (Putative myb-like protein J-like (Fragment) n=3 Tax=Solanum TaxID=4107 RepID=A0A0V0H3Y4_SOLCH)

HSP 1 Score: 64.7 bits (156), Expect = 7.790e-10
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    2 NVDIISLCVLAASRILSRNKG-RWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRK 72
            N D +S C+L+  +   R KG  WT++EH+RFL    +LGK    WR IS+  VTTR+P QV +HAQKYF K
Sbjct:   93 NGDYLSDCLLSQPQ--ERRKGVGWTEEEHRRFLMGLEKLGKG--DWRGISRKFVTTRTPTQVASHAQKYFLK 160          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.030e-9
Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   18 SRNKGRWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDE 82
            S N GRWTK+EH  FL      GKN   W  I+ +V  TRS  QVRTH QKYF+K+ +G  FP+E
Sbjct:    4 SFNNGRWTKEEHDAFLQGLVLHGKN---WDLIAPIV-KTRSAVQVRTHGQKYFKKVDKGERFPEE 64          
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Match: M7Z095_TRIUA (Transcription factor MYB1R1 n=3 Tax=Triticum TaxID=4564 RepID=M7Z095_TRIUA)

HSP 1 Score: 61.6 bits (148), Expect = 2.450e-9
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   15 RILSRNKG-RWTKDEHKRFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYF 70
            R   R KG  WT+DEH+RFL+   +LGK    WR IS+  VTTR+P QV +HAQKYF
Sbjct:   13 RAQERKKGVPWTEDEHRRFLAGLEKLGKG--DWRGISRHFVTTRTPTQVASHAQKYF 67          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig198.6413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU58_ECTSI6.360e-9592.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBL6_9PHAE1.650e-4692.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L659_9PHAE1.100e-4546.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU61_ECTSI3.120e-4243.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA96_9PHAE1.520e-3386.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3Q7HA84_SOLLC4.180e-1050.00Uncharacterized protein n=1 Tax=Solanum lycopersic... [more]
UPI000CE1DF326.870e-1060.42probable transcription factor At5g61620 n=2 Tax=Qu... [more]
A0A0V0H3Y4_SOLCH7.790e-1050.00Putative myb-like protein J-like (Fragment) n=3 Ta... [more]
A0A6H5JC35_9PHAE2.030e-952.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
M7Z095_TRIUA2.450e-956.14Transcription factor MYB1R1 n=3 Tax=Triticum TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 20..72
e-value: 3.8E-6
score: 36.4
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 21..69
e-value: 2.6E-10
score: 40.3
NoneNo IPR availableGENE3D1.10.10.60coord: 22..75
e-value: 2.9E-11
score: 45.3
NoneNo IPR availablePANTHERPTHR44191FAMILY NOT NAMEDcoord: 19..72
NoneNo IPR availablePANTHERPTHR44191:SF2coord: 19..72
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 21..72
e-value: 1.6E-10
score: 39.1
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 16..74
score: 12.945
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 18..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig198contigEcto-sp13_S_contig198:18183..20220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig198.6413.1mRNA_Ecto-sp13_S_contig198.6413.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig198 18183..20220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig198.6413.1 ID=prot_Ecto-sp13_S_contig198.6413.1|Name=mRNA_Ecto-sp13_S_contig198.6413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
MNVDIISLCVLAASRILSRNKGRWTKDEHKRFLSVAGQLGKNKESWRWIS
QVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDEGGQDSRLDPHVAAAAAAE
TAAGAAALGHDLDGGMFLPIGGGGTSSALPPLWADASIGDASGGGFLLDS
W*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR009057Homeobox-like_sf