prot_Ecto-sp13_S_contig1979.6408.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1979.6408.1
Unique Nameprot_Ecto-sp13_S_contig1979.6408.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1979.6408.1 vs. uniprot
Match: D8LC50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC50_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 1.880e-37
Identity = 128/152 (84.21%), Postives = 130/152 (85.53%), Query Frame = 0 
Query:    1 MCPSPPLSGKFLTQRKILFDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKRSYDDDRLEAVSKDELSALKGNVIYPRARRKAAIASQRRTASEIGKFVGGAADDDDXXXSDEDGELGGNXXXASAAVADGESEEEAELEF 152
            MC SPPLSG FL QR    DE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKRSYDDDRLEAVSKDELSALKGN+IYPRARRKAAIASQRRTASEIGKFVGGAAD+DDXXXSDEDGEL   XXX           EEAELEF
Sbjct:    1 MCSSPPLSGDFLAQRD---DEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKRSYDDDRLEAVSKDELSALKGNIIYPRARRKAAIASQRRTASEIGKFVGGAADEDDXXXSDEDGELXXXXXXXXXXXXXXXXXEEAELEF 149
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BLAST of mRNA_Ecto-sp13_S_contig1979.6408.1 vs. uniprot
Match: A0A6H5J8X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8X7_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 6.280e-34
Identity = 79/93 (84.95%), Postives = 79/93 (84.95%), Query Frame = 0 
Query:   60 KAKRSYDDDRLEAVSKDELSALKGNVIYPRARRKAAIASQRRTASEIGKFVGGAADDDDXXXSDEDGELGGNXXXASAAVADGESEEEAELEF 152
            KAKRSYDDDRLEAVSKDELSALKGNVIYPRARRKAAIASQRRTASEIGKFVGGAADDD XXXSDEDGELGG XXX            EAELEF
Sbjct:  149 KAKRSYDDDRLEAVSKDELSALKGNVIYPRARRKAAIASQRRTASEIGKFVGGAADDDXXXXSDEDGELGGXXXXXXXXXXXXXXXXEAELEF 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1979.6408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC50_ECTSI1.880e-3784.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8X7_9PHAE6.280e-3484.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1979contigEcto-sp13_S_contig1979:13307..14447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1979.6408.1mRNA_Ecto-sp13_S_contig1979.6408.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1979 12947..14447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1979.6408.1 ID=prot_Ecto-sp13_S_contig1979.6408.1|Name=mRNA_Ecto-sp13_S_contig1979.6408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
MCPSPPLSGKFLTQRKILFDEDEDEQEEEEASGSGGGKGKGKGKGKGTAV
AEKERRPKKKAKRSYDDDRLEAVSKDELSALKGNVIYPRARRKAAIASQR
RTASEIGKFVGGAADDDDDDDSDEDGELGGNLGGASAAVADGESEEEAEL
EF*
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