prot_Ecto-sp13_S_contig1979.6407.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1979.6407.1
Unique Nameprot_Ecto-sp13_S_contig1979.6407.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length598
Homology
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: D8LC49_ECTSI (TPR Domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC49_ECTSI)

HSP 1 Score: 951 bits (2459), Expect = 0.000e+0
Identity = 518/598 (86.62%), Postives = 532/598 (88.96%), Query Frame = 0
Query:    1 METHNSSEGS-LSETSEEVRSRILSLRKGGNDHGAVVAAEESLNRSVDSHGPSSEETREVAADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTSRGQPFLGKARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAMMDQEASFFHVEDPNTSSSAPVDIGEDGAAAASVDLTADDSGRKGSVGDGDTSVPSVGVAGRLESSSVPRPEVQGEDEKTVCSSAVADDGRTCSPEASSSVHDADHDMPEGGTKANPAENGTGGHGGMRGGGGESTGAEKSVQVDASSVGRQDRHRSAAGGLLAIACFNLGVEREHLGQLDAAIASYKDARSAADQHLGPESPVAKGIEVALEKASAAAATXXXXXRKXXASRSRVAVASFPCIGKLKFGHKSSQVPSRFGGEGLSPRCRSQQQHGEETVGESMARDLLEHAYTSPRPCPAPPHKGSWAHLSHVPNPRPAPPGRSASPGPQRAGRWTSVDTPAARAMKEAQRRSEGWRDDGRNRGDVDGGLRWRALACAEWQCSPREALHAQRQVAEQHAVDVGVAAPTSDAT 597
            ME HNSSEGS +SETSEE+RSRILSLRKGGNDHGAVVAAEESL RSVDSHGPSSEETREVAADLVLAYNHLAMKRLSENNIKAS RLLQKASLLTSRGQPFLGKARLQARALTLNN GCLMK WGKPRE VKFLARALRIEAK+PGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAMM+QEA F +VEDPNT+S  P D+ EDGAA ASV LT+ DSG KG VGD   SVPSVGV G LESSSVPRPEVQGED +TV SSAVADDGRTCSPEASSSVH ADHD+PEGG KANPAENGT GHGG      ES G EKSVQ D SSV RQD   SAAGGLLAIACFNLGVEREHLGQLDAAIASYK ARSAADQHLGPESPVAKGIE ALEKASAAAAT     RK  ASRSRVAV+SFPCIGKLKFG K+SQVPSRF G GLSPRCRSQQQHGEE VGE+ ARDLLEHAYTSPRPCPAPPHKGSWA L HVP PR APP RSAS GPQRAGRWTSVDTPAARAMKEAQRRSEGWR+ GR RGDVDG LRWRALACAEWQCSPREALHAQRQVAEQH VDVGVAAPTSDAT
Sbjct:    1 MEAHNSSEGSFISETSEEIRSRILSLRKGGNDHGAVVAAEESLTRSVDSHGPSSEETREVAADLVLAYNHLAMKRLSENNIKASVRLLQKASLLTSRGQPFLGKARLQARALTLNNFGCLMKNWGKPRESVKFLARALRIEAKVPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAMMEQEAGFSYVEDPNTASGDPADMDEDGAAVASVHLTSADSGTKGGVGDSGNSVPSVGVTGCLESSSVPRPEVQGEDGETVSSSAVADDGRTCSPEASSSVHHADHDVPEGGKKANPAENGTEGHGGXXXX--ESAGDEKSVQGDTSSVDRQDGPPSAAGGLLAIACFNLGVEREHLGQLDAAIASYKYARSAADQHLGPESPVAKGIETALEKASAAAATAASYSRKRAASRSRVAVSSFPCIGKLKFGQKNSQVPSRFDGVGLSPRCRSQQQHGEEVVGEATARDLLEHAYTSPRPCPAPPHKGSWARLGHVPTPRSAPPARSASRGPQRAGRWTSVDTPAARAMKEAQRRSEGWRNGGRKRGDVDGDLRWRALACAEWQCSPREALHAQRQVAEQHGVDVGVAAPTSDAT 596          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A7S1H3R9_HEMAN (Hypothetical protein n=6 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H3R9_HEMAN)

HSP 1 Score: 84.3 bits (207), Expect = 3.490e-13
Identity = 59/162 (36.42%), Postives = 83/162 (51.23%), Query Frame = 0
Query:   25 LRKGGNDHGAVVAAEESLNRSVDSHGPSSEETREVAADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTS-RGQPFLGKARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAM 185
            LR+ G    A+   E  L    +  G    E  +     + + N  AM  L   ++  S  LL+KA ++T  RG       RL+ RA+TLNNLGC M++ GK    +++L +ALRIE  +    DNPAGTH+NM A LS +  H  A  HA  A+ L   A+
Sbjct:   24 LRREGRTVEALTELERGLFLRREVLGDKHAEVEKCCCAFISSTNSTAMTALQAGDMLLSFELLKKAEIVTEPRGLIRDTMTRLKMRAITLNNLGCFMRRRGKLHSALQYLDKALRIELTVK-TVDNPAGTHLNMCAVLSQLNRHAAALQHAQCALQLLEDAV 184          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A7S1SZ57_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZ57_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 6.330e-13
Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   67 YNHLAMKRLSENNIKASGRLLQKASLLTSRGQPFLGK--ARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIE-AKMPGGADNPAGTHVNMSAALSTIGLH 167
            YN L ++ L      AS  + +KA +LT+ G     K  AR++ RA+T NNLGC  K+ GK    + +L R ++IE A   G  +NPA TH+N++A LST+G H
Sbjct:    3 YNVLGLRLLEAEQFDASYEMFKKAEMLTAPGSSLAEKPEARMRLRAITFNNLGCYYKQRGKLHAALHYLERTVKIEEAADIGAVENPASTHLNIAATLSTLGRH 106          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A5A8C0Q3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C0Q3_CAFRO)

HSP 1 Score: 68.9 bits (167), Expect = 1.430e-8
Identity = 48/131 (36.64%), Postives = 65/131 (49.62%), Query Frame = 0
Query:   50 GPSSEETREVAADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTSRGQPFLGKARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDL 180
            G  SEE       +    N LAM  L + +      LL+KA +LT R            RA+T NNL C  ++ G+    +KFL +AL IEA++     NPA TH+N+ A LS +  H EA  HA  A+ L
Sbjct:   50 GADSEEVWGACRSVGELCNMLAMSYLQQEDFDMVTELLKKAEILTERDAA--------GRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLE-RVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A5A8DKN8_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKN8_CAFRO)

HSP 1 Score: 68.9 bits (167), Expect = 1.990e-8
Identity = 48/131 (36.64%), Postives = 65/131 (49.62%), Query Frame = 0
Query:   50 GPSSEETREVAADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTSRGQPFLGKARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDL 180
            G  SEE       +    N LAM  L + +      LL+KA +LT R            RA+T NNL C  ++ G+    +KFL +AL IEA++     NPA TH+N+ A LS +  H EA  HA  A+ L
Sbjct:   50 GADSEEVWGACRSVGELCNMLAMSYLQQEDFDMVTELLKKAEILTERDAA--------GRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLE-RVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A5A8DFH3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFH3_CAFRO)

HSP 1 Score: 68.9 bits (167), Expect = 2.190e-8
Identity = 48/131 (36.64%), Postives = 65/131 (49.62%), Query Frame = 0
Query:   50 GPSSEETREVAADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTSRGQPFLGKARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDL 180
            G  SEE       +    N LAM  L + +      LL+KA +LT R            RA+T NNL C  ++ G+    +KFL +AL IEA++     NPA TH+N+ A LS +  H EA  HA  A+ L
Sbjct:   50 GADSEEVWGACRSVGELCNMLAMSYLQQEDFDMVTELLKKAEILTERDAA--------GRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLE-RVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A5A8C5F9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5F9_CAFRO)

HSP 1 Score: 68.9 bits (167), Expect = 2.440e-8
Identity = 48/131 (36.64%), Postives = 65/131 (49.62%), Query Frame = 0
Query:   50 GPSSEETREVAADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTSRGQPFLGKARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDL 180
            G  SEE       +    N LAM  L + +      LL+KA +LT R            RA+T NNL C  ++ G+    +KFL +AL IEA++     NPA TH+N+ A LS +  H EA  HA  A+ L
Sbjct:   50 GADSEEVWGACRSVGELCNMLAMSYLQQEDFDMVTELLKKAEILTERDAA--------GRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLE-RVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A7S0HFD1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HFD1_9CRYP)

HSP 1 Score: 67.0 bits (162), Expect = 3.180e-8
Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = 0
Query:   63 LVLAYNHLAMKRLSENNIKASGRLLQKASLLTSRGQPFLGKARLQAR--ALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAMMDQEAS 191
            LV++YN L M  +    ++ +  LL+KA  +    +  L    L+ R  A+T NNLGC  +  G     +K L +AL IE      +DNPA TH+N+SA LS +  H  A  H   A+ L  +AM +Q+ S
Sbjct:   39 LVMSYNGLGMAAIRAGGMEVAWELLRKAERVAGE-RSLLKDKELKNRLLAITYNNLGCFYRTRGNLHSALKALDKALWIEMSCD-ESDNPAATHLNISAVLSKLSKHHAALEHINCALQLLDKAMKNQKRS 167          
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Match: A0A388M7C0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M7C0_CHABU)

HSP 1 Score: 63.5 bits (153), Expect = 1.060e-6
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 0
Query:   61 ADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTSR--------GQPFLGK------ARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAI 178
            A L  A+N L+M RL+ ++   S  LL++A +LT          G  ++ +       R + RA+TLNN+GC+ +K G+P   +++L  A+ IE +    A+   GT +NM A LS +G H EA  HA  A+
Sbjct:   18 AKLAEAFNILSM-RLANDDCHVSYELLRRAEVLTQHPSSPAKLDGYDWVARPIEDASVRARLRAVTLNNMGCIQQKLGRPYTALRYLMSAMEIERRAH-MAEKREGTLLNMCATLSQLGRHVEAREHAAAAV 147          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1979.6407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LC49_ECTSI0.000e+086.62TPR Domain containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1H3R9_HEMAN3.490e-1336.42Hypothetical protein n=6 Tax=Hemiselmis andersenii... [more]
A0A7S1SZ57_9CHLO6.330e-1341.35Hypothetical protein (Fragment) n=2 Tax=Tetraselmi... [more]
A0A5A8C0Q3_CAFRO1.430e-836.64Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DKN8_CAFRO1.990e-836.64Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DFH3_CAFRO2.190e-836.64Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8C5F9_CAFRO2.440e-836.64Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S0HFD1_9CRYP3.180e-835.88Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A388M7C0_CHABU1.060e-634.85Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 348..381
e-value: 0.12
score: 21.4
coord: 110..143
e-value: 21.0
score: 12.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 4..203
e-value: 9.2E-7
score: 30.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 110..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1979contigEcto-sp13_S_contig1979:8670..11088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1979.6407.1mRNA_Ecto-sp13_S_contig1979.6407.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1979 8670..11210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1979.6407.1 ID=prot_Ecto-sp13_S_contig1979.6407.1|Name=mRNA_Ecto-sp13_S_contig1979.6407.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=598bp
METHNSSEGSLSETSEEVRSRILSLRKGGNDHGAVVAAEESLNRSVDSHG
PSSEETREVAADLVLAYNHLAMKRLSENNIKASGRLLQKASLLTSRGQPF
LGKARLQARALTLNNLGCLMKKWGKPREGVKFLARALRIEAKMPGGADNP
AGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAMMDQEASFFHVEDPNT
SSSAPVDIGEDGAAAASVDLTADDSGRKGSVGDGDTSVPSVGVAGRLESS
SVPRPEVQGEDEKTVCSSAVADDGRTCSPEASSSVHDADHDMPEGGTKAN
PAENGTGGHGGMRGGGGESTGAEKSVQVDASSVGRQDRHRSAAGGLLAIA
CFNLGVEREHLGQLDAAIASYKDARSAADQHLGPESPVAKGIEVALEKAS
AAAATAASYSRKRAASRSRVAVASFPCIGKLKFGHKSSQVPSRFGGEGLS
PRCRSQQQHGEETVGESMARDLLEHAYTSPRPCPAPPHKGSWAHLSHVPN
PRPAPPGRSASPGPQRAGRWTSVDTPAARAMKEAQRRSEGWRDDGRNRGD
VDGGLRWRALACAEWQCSPREALHAQRQVAEQHAVDVGVAAPTSDAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf