prot_Ecto-sp13_S_contig19740.6378.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19740.6378.1
Unique Nameprot_Ecto-sp13_S_contig19740.6378.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: D8LHW8_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW8_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 7.650e-113
Identity = 198/210 (94.29%), Postives = 204/210 (97.14%), Query Frame = 0
Query:    1 MIHTVKVLDIMEKVSTGGNDRPRLAVTIDDCGQVGEMVEDDEQAGGISGQVGQAGADGGEADARRSTEEXXXXXXXXXXXXXXXXXVLEEPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            ++  ++VLDIMEKVSTGGNDRPRLAVTIDDCGQVGE+VEDDEQAGG+SGQVGQA   GGEADARRSTEEXXXXXXXXXXXXXXXXXVLEEPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQN KKEKHKAAFGWNVFNQDALFKGYKKRL
Sbjct:  149 IVEGMEVLDIMEKVSTGGNDRPRLAVTIDDCGQVGEVVEDDEQAGGVSGQVGQAXXXGGEADARRSTEEXXXXXXXXXXXXXXXXXVLEEPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNNKKEKHKAAFGWNVFNQDALFKGYKKRL 358          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: A0A7S2RFH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFH4_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.740e-36
Identity = 83/206 (40.29%), Postives = 125/206 (60.68%), Query Frame = 0
Query:    5 VKVLDIMEKVSTGGNDRPRLAVTIDDCGQVGEMVEDDEQAGGISGQVGQAGADGGEADARRSTEEXXXXXXXXXXXXXXXXXVLEEPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            +  L +++KVST  NDRPR  V + DCGQ+G +V+D +   G +  V QA  D    D   S E                    +E DE+ LG MS  ++RLF +R+K+NKGR+AN++    E  RL DP + AK +  E+ E +++W  EM+ERGLS D++++ ETA+ A    ++ K+KE++ A+FGW+VFNQD+L + Y+KRL
Sbjct:  179 MSTLKLIQKVSTDRNDRPRFDVVVMDCGQLGTVVDDGQGDVGAAAGV-QADQDPVSTD-NPSVEAAPEGGEDPSAGSAEVEDEEDEVDESVLGNMSEKQRRLFLLRMKINKGRKANRQEAAQEKQRLDDPFFQAKQKAAERRENREKWRKEMEERGLSTDQSYLFETAEVASSKHERKKRKERNAASFGWDVFNQDSLHRAYEKRL 382          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: A0A7S2FEJ2_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEJ2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.230e-32
Identity = 63/118 (53.39%), Postives = 89/118 (75.42%), Query Frame = 0
Query:   93 EATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            E  LG MS  ++RLFK+R+K+NKGR+ANKKA  DE  RL DP + AK +  E++  K+RW  EMK+RGL+ D++++ ETA++A+   ++  KK+K KAAFGW+VFNQD L+K Y+KRL
Sbjct:    1 EGALGHMSERQKRLFKLRMKINKGRKANKKATTDEQKRLDDPHWEAKEKAAERQANKQRWAKEMKDRGLTTDQSYLFETAETAEQKYERKAKKDKGKAAFGWDVFNQDTLYKAYEKRL 118          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: K8Z7S9_NANGC (Myosin light chain kinase n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z7S9_NANGC)

HSP 1 Score: 106 bits (264), Expect = 6.180e-23
Identity = 52/118 (44.07%), Postives = 84/118 (71.19%), Query Frame = 0
Query:   93 EATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            EA +  M+  ++RL+K++ K+N+GR+ N++AVK+E+ R + P   A++R +E+ ++ +RW  E+  RG+  +EA+M ETA++A        +K K +AAFGW+VFNQDAL+K YKKRL
Sbjct:  587 EADMSGMTETQRRLYKLKWKLNQGRKLNRQAVKEEFTRKNTPNLEARLRAEERRDSNERWRKEILARGMKPEEAYMFETAEAAGKKQAAAVRKAKGQAAFGWDVFNQDALYKAYKKRL 704          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: A0A4D9CQW4_9STRA (PPIase cyclophilin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQW4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.150e-22
Identity = 51/118 (43.22%), Postives = 82/118 (69.49%), Query Frame = 0
Query:   93 EATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            E  +  M+  ++RL+K++ K+N+GR+ N++AVK+E+ R   P   A++R +E+ ++ +RW  E+  RG+  +EA+M ETA++A        +K K +AAFGW+VFNQDAL+K YKKRL
Sbjct:  253 EVDMSGMTETQRRLYKLKWKLNQGRKLNRQAVKEEFTRKKTPNLEARLRAEERRDSNERWRKEILARGMKPEEAYMFETAEAAGKKQAAAARKAKGQAAFGWDVFNQDALYKAYKKRL 370          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: A0A836CNL4_9STRA (Cyclophilin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL4_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.000e-21
Identity = 82/213 (38.50%), Postives = 120/213 (56.34%), Query Frame = 0
Query:    1 MIHTVKVLDIMEKVSTGGNDRPRLAVTIDDCGQVGEMVEDDEQAGGISGQVGQA-GADGGEADARRSTEEXXXXXXXXXXXXXXXXXVLEEPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDP--GYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            ++  + V+ +MEKV+TG ND+PR+AV I DCGQV +   + +QA      V Q   A   +  A    E           XXXXXXX +E P +  L  MS  E+RL ++RLK+N  R+AN++ VKDE+ R++    G       ++ +   K      K++G +  +A +  TA++A   A    KK+K KAAFGW++FNQD L+K YKKRL
Sbjct:  146 VVEGMDVVQLMEKVATGANDKPRMAVLIADCGQVADEEPEPQQAEAAQAAVAQQKAAITSQRAAEPGKEVAGGEEQPQGAXXXXXXXXVEAPVD--LSAMSEKERRLHQLRLKLNASRKANRQEVKDEFKRMNGEKKGXXXXXXAQDGQPKGKG----RKKKGAADPDALLSVTAEAAAQEAMGVHKKDKKKAAFGWDMFNQDTLYKTYKKRL 352          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: A0A7S3Y577_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y577_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 4.040e-19
Identity = 83/188 (44.15%), Postives = 114/188 (60.64%), Query Frame = 0
Query:   16 TGGNDRPRLAVTIDDCGQVGEMVED---DEQAGGISGQVGQAGADGGEADARRSTEEXXXXXXXXXXXXXXXXXVLEEPDEA--------TLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAF 192
            T  NDRPR  V + +CG++GE+V++    E+A     +       G EA + +    XXXXXXXXXXXXXXXXX                TL  M+ +++RLF +RLKMN+GR+ NK+A K+E++RL+DP    K       E KKRWEAE++ERG+SK +A ++ETA+ A    Q  KKK+K  AAF
Sbjct:    1 TDVNDRPRAPVIVSECGEIGEVVKELSVAEKAMAKYKESSTVAEKGEEAASEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLEAMTPMQRRLFNLRLKMNQGRKLNKQATKEEHDRLTDPQRKKKEXXXXXXENKKRWEAELRERGISKADACLLETAEQAGQKYQAKKKKDKKAAAF 188          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: W4H3R8_9STRA (Pre-mRNA-splicing factor SYF2 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3R8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 7.960e-19
Identity = 50/121 (41.32%), Postives = 80/121 (66.12%), Query Frame = 0
Query:   90 EPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            EP+++     ++ E+RLF+IR+KMN GR+ NK+  ++E+ + S P   AK  + + + A  + E       + KD+A+M++T   A++ A+++ KKEK KAAFGW VFNQD+L+  YKKRL
Sbjct:    6 EPEDSADATRTAAEKRLFEIRMKMNAGRKKNKELAEEEHMKASLPAGKAKKWSADVDGAAPKREVA----SVPKDKAYMLDTVVDAELKAKKSHKKEKQKAAFGWEVFNQDSLYNAYKKRL 122          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: A0A0P1A4B3_PLAHL (Cyclin D-interacting protein GCIP n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A4B3_PLAHL)

HSP 1 Score: 88.6 bits (218), Expect = 3.780e-18
Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 0
Query:   90 EPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            E DE T   M+  +++LF IR+KMN GR+ANKK V  E++R+ +       + K++ + +KR E +M+    + D+A + ETA++A +  +   KKEK KAAFGW+VFN+D+L+KGYKKRL
Sbjct:    5 EQDELTA--MTPAQRKLFDIRMKMNAGRKANKKEVVAEHDRIQNI-----KKDKKENQYRKREERKME---FASDKAHLNETAEAAAMKTKITSKKEKRKAAFGWDVFNEDSLYKGYKKRL 115          
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Match: A0A6G0X0R1_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0R1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 5.980e-18
Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 0
Query:   88 LEEPDEATLGKMSSVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKKRWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQDALFKGYKKRL 210
            +EE  +     MS+VE++LF+IR+KMN GR+ NK+ V+ E+ + S  G  AK  T   +E  KR E++        +++++ +T   A++  +++ KKEK KAAFGW VFNQD+L+  YKKRL
Sbjct:    7 VEEQTQDEPQNMSAVEKKLFEIRMKMNAGRKKNKELVEQEHMKASLSGAKAKKLTSSDDEPPKRQESKP-------EKSYLNDTIADAEVKTKKSLKKEKQKAAFGWEVFNQDSLYNAYKKRL 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19740.6378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHW8_ECTSI7.650e-11394.29PPIase cyclophilin-type domain-containing protein ... [more]
A0A7S2RFH4_9STRA1.740e-3640.29Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2FEJ2_9STRA1.230e-3253.39Pre-mRNA-splicing factor SYF2 n=1 Tax=Florenciella... [more]
K8Z7S9_NANGC6.180e-2344.07Myosin light chain kinase n=2 Tax=Nannochloropsis ... [more]
A0A4D9CQW4_9STRA1.150e-2243.22PPIase cyclophilin-type domain-containing protein ... [more]
A0A836CNL4_9STRA1.000e-2138.50Cyclophilin-like domain-containing protein n=1 Tax... [more]
A0A7S3Y577_HETAK4.040e-1944.15Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W4H3R8_9STRA7.960e-1941.32Pre-mRNA-splicing factor SYF2 n=2 Tax=Aphanomyces ... [more]
A0A0P1A4B3_PLAHL3.780e-1844.63Cyclin D-interacting protein GCIP n=1 Tax=Plasmopa... [more]
A0A6G0X0R1_9STRA5.980e-1841.46Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..86
NoneNo IPR availablePANTHERPTHR13264:SF5PRE-MRNA-SPLICING FACTOR SYF2coord: 66..209
IPR013260mRNA splicing factor SYF2PANTHERPTHR13264GCIP-INTERACTING PROTEIN P29coord: 66..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19740contigEcto-sp13_S_contig19740:2..2897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19740.6378.1mRNA_Ecto-sp13_S_contig19740.6378.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19740 2..2897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19740.6378.1 ID=prot_Ecto-sp13_S_contig19740.6378.1|Name=mRNA_Ecto-sp13_S_contig19740.6378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MIHTVKVLDIMEKVSTGGNDRPRLAVTIDDCGQVGEMVEDDEQAGGISGQ
VGQAGADGGEADARRSTEEDESVAQKEEEEEEEEEEVLEEPDEATLGKMS
SVEQRLFKIRLKMNKGRRANKKAVKDEYNRLSDPGYAAKMRTKEKEEAKK
RWEAEMKERGLSKDEAFMMETAQSADITAQQNKKKEKHKAAFGWNVFNQD
ALFKGYKKRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013260mRNA_splic_SYF2