prot_Ecto-sp13_S_contig19735.6374.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19735.6374.1
Unique Nameprot_Ecto-sp13_S_contig19735.6374.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length361
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19735.6374.1 vs. uniprot
Match: D8LLX9_ECTSI (Cilia- and flagella-associated protein 36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX9_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 7.180e-164
Identity = 275/315 (87.30%), Postives = 284/315 (90.16%), Query Frame = 0 
Query:    9 GSQDPAGNGEEKSMAASNGESKQDKAAARPGRGRNALDRQLRKAMDANLQELELMHKREEVEQAELEQAIAMSLALEAKRSEQATLQECLDGVGDVSGPRFGSRALSKPRNGSNVTRTGKSLQTGCKGGDDPDGDGDRAGGGGVSRRRQSKERDAARELTDVADDTPAEAKHDFIGEEGGAEEKHRSSSSSSLSCLGGLKKGTGAKALPPLSKTPVVGEIAAPFRGGSGEGVEGCSVRSSTATVIRDPDVESAERRREAREASEKARKFLXXXXXXXXXLKAQSEVSEEDSAQRERHLKNMRDRIVSAKRAGREE 323
            G ++ AGNGEEKSM+ASNGESK+DKAAARPGRGR+ALDRQLRKAMDANLQELELMHKREEVEQAELEQAIAMSLALEAKRSEQATLQECLDGVGDVSGPRFGS            ++TGKSLQ GCKGGDDPDGDGDRAGGGGVSRRRQSKERDAAREL DVADD PAEAK DFIGE GGAEEKHRSSSSSSLSCLGGLKKGTGAKALPPLSKTPVVGEI APFRGGSGEGVEGCS+ SSTAT+IRDPDVESAERRREAR ASEKARKFL         LKAQSEVSEEDSAQRERHLKNMRDRIVSAKRAGREE
Sbjct:  152 GDEELAGNGEEKSMSASNGESKRDKAAARPGRGRSALDRQLRKAMDANLQELELMHKREEVEQAELEQAIAMSLALEAKRSEQATLQECLDGVGDVSGPRFGSVPTG--------SQTGKSLQAGCKGGDDPDGDGDRAGGGGVSRRRQSKERDAARELADVADDAPAEAKRDFIGEGGGAEEKHRSSSSSSLSCLGGLKKGTGAKALPPLSKTPVVGEIVAPFRGGSGEGVEGCSISSSTATMIRDPDVESAERRREARAASEKARKFLEERRQAQKALKAQSEVSEEDSAQRERHLKNMRDRIVSAKRAGREE 458
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19735.6374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLX9_ECTSI7.180e-16487.30Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..288
NoneNo IPR availableCOILSCoilCoilcoord: 50..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19735contigEcto-sp13_S_contig19735:170..3246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19735.6374.1mRNA_Ecto-sp13_S_contig19735.6374.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19735 170..3246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19735.6374.1 ID=prot_Ecto-sp13_S_contig19735.6374.1|Name=mRNA_Ecto-sp13_S_contig19735.6374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=361bp
MSRNGLSCGSQDPAGNGEEKSMAASNGESKQDKAAARPGRGRNALDRQLR
KAMDANLQELELMHKREEVEQAELEQAIAMSLALEAKRSEQATLQECLDG
VGDVSGPRFGSRALSKPRNGSNVTRTGKSLQTGCKGGDDPDGDGDRAGGG
GVSRRRQSKERDAARELTDVADDTPAEAKHDFIGEEGGAEEKHRSSSSSS
LSCLGGLKKGTGAKALPPLSKTPVVGEIAAPFRGGSGEGVEGCSVRSSTA
TVIRDPDVESAERRREAREASEKARKFLEERRQAQQALKAQSEVSEEDSA
QRERHLKNMRDRIVSAKRAGREEEASKAASDSAAAAERGERAALPRTGGI
STSSSPASGAA
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