prot_Ecto-sp13_S_contig19710.6362.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19710.6362.1
Unique Nameprot_Ecto-sp13_S_contig19710.6362.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: D8LQ01_ECTSI (Structural maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.710e-50
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query:    2 HHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            HHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK
Sbjct: 1234 HHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 1322          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: A0A7S0C203_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C203_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.250e-49
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0
Query:    1 RHHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            R +E LRR+RL++FM GFGQITL+LKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK
Sbjct:   77 REYEELRRKRLEKFMDGFGQITLKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 166          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: I2CR95_NANGC (Structural maintenance of chromosome 4 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR95_NANGC)

HSP 1 Score: 163 bits (413), Expect = 4.300e-49
Identity = 79/88 (89.77%), Postives = 85/88 (96.59%), Query Frame = 0
Query:    3 HENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            H+ LRRQRL+EFMAGF  ITL+LKEMYQM+TLGGDAELEL+DSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+K
Sbjct:   35 HDELRRQRLEEFMAGFADITLKLKEMYQMLTLGGDAELELLDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYK 122          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: A0A7S1ZB93_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB93_TRICV)

HSP 1 Score: 162 bits (411), Expect = 6.130e-48
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0
Query:    3 HENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            HE LRR RL+ FM GFG+ITL+LKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+K
Sbjct:  122 HEELRRMRLEMFMEGFGRITLKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYK 209          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: A0A7S3PBM4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PBM4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.010e-47
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0
Query:    1 RHHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            R +E+LRR+RL+ FM GFGQITL+LKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI+NLSGGEKTLSSLALVFALHH+K
Sbjct:  112 RTYEDLRRKRLEMFMEGFGQITLKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYK 201          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: A0A6D2KI31_9BRAS (SMC_N domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KI31_9BRAS)

HSP 1 Score: 162 bits (411), Expect = 4.110e-47
Identity = 78/90 (86.67%), Postives = 87/90 (96.67%), Query Frame = 0
Query:    1 RHHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            +H++ LR++RLDEFMAGF  I+L+LKEMYQMITLGGDAELELVDSLDPFSEG+VFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+K
Sbjct:  199 KHYDELRKRRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYK 288          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: A0A7R9YD84_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD84_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.170e-47
Identity = 78/87 (89.66%), Postives = 85/87 (97.70%), Query Frame = 0
Query:    4 ENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            E+LRRQRL+EFM GFG ITL+LKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPP+KSWKNI+NLSGGEKTLSSLALVFALHH++
Sbjct:   74 EDLRRQRLEEFMHGFGIITLKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPRKSWKNISNLSGGEKTLSSLALVFALHHYR 160          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: UPI00077A7825 (structural maintenance of chromosomes protein 4-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7825)

HSP 1 Score: 156 bits (394), Expect = 5.400e-47
Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    6 LRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            +R+QRLDEFM GF  IT +LKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI+NLSGGEKTLSSLALVFALHH+K
Sbjct:    1 MRKQRLDEFMTGFSLITTKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYK 85          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: A0A7S0X103_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X103_9CHLO)

HSP 1 Score: 157 bits (397), Expect = 7.600e-47
Identity = 78/90 (86.67%), Postives = 84/90 (93.33%), Query Frame = 0
Query:    1 RHHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            R +E LR+ RLD FMAGF  I+LRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI+NLSGGEKTLSSL+LVFALHH+K
Sbjct:   81 RSYEGLRKARLDGFMAGFNTISLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLSLVFALHHYK 170          
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Match: A0A803NAJ8_CHEQI (SMC_N domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803NAJ8_CHEQI)

HSP 1 Score: 157 bits (396), Expect = 8.760e-47
Identity = 75/88 (85.23%), Postives = 84/88 (95.45%), Query Frame = 0
Query:    3 HENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFK 90
            ++  R++RLDEFMAGF  I+L+LKEMYQMITLGGDAELELVDSLDPFSEG+VFSVRPPKKSWKNIANLSGGEKTLSSLAL+FALHH+K
Sbjct:   16 YDEWRKKRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALIFALHHYK 103          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19710.6362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ01_ECTSI1.710e-50100.00Structural maintenance of chromosomes protein n=2 ... [more]
A0A7S0C203_9STRA2.250e-4991.11Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
I2CR95_NANGC4.300e-4989.77Structural maintenance of chromosome 4 n=1 Tax=Nan... [more]
A0A7S1ZB93_TRICV6.130e-4890.91Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A7S3PBM4_9STRA3.010e-4788.89Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6D2KI31_9BRAS4.110e-4786.67SMC_N domain-containing protein n=1 Tax=Microthlas... [more]
A0A7R9YD84_9STRA5.170e-4789.66Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI00077A78255.400e-4789.41structural maintenance of chromosomes protein 4-li... [more]
A0A7S0X103_9CHLO7.600e-4786.67Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A803NAJ8_CHEQI8.760e-4785.23SMC_N domain-containing protein n=1 Tax=Chenopodiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 7..91
e-value: 5.8E-22
score: 80.0
NoneNo IPR availablePANTHERPTHR43939:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4coord: 2..90
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 2..90
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19710contigEcto-sp13_S_contig19710:1984..2738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19710.6362.1mRNA_Ecto-sp13_S_contig19710.6362.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19710 1984..2738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19710.6362.1 ID=prot_Ecto-sp13_S_contig19710.6362.1|Name=mRNA_Ecto-sp13_S_contig19710.6362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
RHHENLRRQRLDEFMAGFGQITLRLKEMYQMITLGGDAELELVDSLDPFS
EGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase