prot_Ecto-sp13_S_contig1971.6360.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1971.6360.1
Unique Nameprot_Ecto-sp13_S_contig1971.6360.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length259
Homology
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: D8LJM8_ECTSI (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM8_ECTSI)

HSP 1 Score: 479 bits (1233), Expect = 2.120e-170
Identity = 248/257 (96.50%), Postives = 252/257 (98.05%), Query Frame = 0
Query:    1 MGKSPLLAAIAAAVVFFDTLNCASGFIITPTALSLRRCRSCFPTSNLKAAEGATETPETESEATAPPAAESEASPSSSLGLARRKAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGPVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRPGSAFPLDSEE 257
            MGK PLLAAIAAAVVFFDTL+CASGFIITPTALSLRRC SCFPTSNLKAAEGATETPETESE TAPPAAESE SPS+SLGLARRKAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRGFQEDSV+GEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGPVRVPLPLTGRVGYLEFTYQD+DIRITRGNRGGLFLH RPGSAFPLDSEE
Sbjct:    1 MGKPPLLAAIAAAVVFFDTLSCASGFIITPTALSLRRCGSCFPTSNLKAAEGATETPETESETTAPPAAESETSPSTSLGLARRKAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRGFQEDSVNGEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGPVRVPLPLTGRVGYLEFTYQDNDIRITRGNRGGLFLHMRPGSAFPLDSEE 257          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A835YZD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD2_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.450e-54
Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 0
Query:   80 GLARRKAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGPVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRPGSAFPLDSEEA 258
            G+   K  L++++  T + ++ES   A+EVDAII +LETL +GF E +VDGEW L F+RNS+GSPSLQK     +GF NFDV+ K F NIV++ G K+KV+ADV YE    E ++L STI  AG+ LGP+ +PLP  GR GYL+  Y DD+ R+T+GNRGG+FLH RP S   L S+EA
Sbjct:   54 GITDDKRRLLKIVSTTGMGKEESIAGAQEVDAIINKLETLGKGFDEATVDGEWQLVFSRNSKGSPSLQKVFSFQKGFANFDVREKVFHNIVQLAGNKIKVLADVAYEA---EGDRLHSTITMAGIKLGPLFIPLPFKGRKGYLDMLYLDDEFRVTKGNRGGVFLHVRPNS---LLSKEA 226          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A7S4D433_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4D433_9EUGL)

HSP 1 Score: 157 bits (398), Expect = 1.870e-41
Identity = 78/173 (45.09%), Postives = 113/173 (65.32%), Query Frame = 0
Query:   85 KAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGPVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRPGSAFPLDSEE 257
            K +L+ L++ T + + E    A+ VD +I +L+ L  GF    VDG W L FTRNS  +P +Q A   ++G+QNFD K   F NI  ++G +++++ADV Y   PE P++L+S IV AG++LGP+++PLPL    G+LEF Y D ++R+TRGNRGGLF+H RP    P   EE
Sbjct:  212 KEQLLELLMPTDMGKVEGGDTAKAVDELITKLQGLDAGFDPAVVDGSWQLVFTRNSNDAPKVQAAFSFNKGYQNFDTKECTFRNIAELYGKRVQLIADVSYRPDPEIPSRLISDIVYAGLHLGPLKIPLPLRA-TGWLEFVYLDSELRVTRGNRGGLFVHIRP----PFSPEE 379          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A7S1IY75_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IY75_9EUGL)

HSP 1 Score: 153 bits (387), Expect = 2.690e-41
Identity = 77/166 (46.39%), Postives = 112/166 (67.47%), Query Frame = 0
Query:   85 KAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGPVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRPGSA 250
            K EL+ ++ GT + + ESA  ++ VD +I +LE +K G+     DG+W L FTRNS  +P +Q A   ++G+QNFDVKA  F NI ++ G  ++VVADV Y   P+ P++L STI  AG+++  +R+PLPL    G+LE+ Y D ++R+TRGNRGGLF+H RP  A
Sbjct:   35 KNELLEILNGTGMGQAESAEQSDRVDRLIRQLEDMKAGYDPAVADGDWQLVFTRNSTSAPKVQAAFSFNQGYQNFDVKASTFRNIAQLCGKWVQVVADVRYTPDPDLPSRLTSTIFYAGLHILCLRLPLPLRA-TGWLEYIYLDPELRVTRGNRGGLFVHIRPAKA 199          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A7S0VW87_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VW87_9CRYP)

HSP 1 Score: 124 bits (311), Expect = 9.820e-31
Identity = 72/185 (38.92%), Postives = 107/185 (57.84%), Query Frame = 0
Query:   80 GLARRKAELMRLILGTSIEE-KESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPGDR----GFQNFDVKAKQFTNIVRVWGGKLKVVADVGY-EIRPEEPNKLVSTIVGAGVNLGPV-RVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRPGSAFPLDSEE 257
            G+A  KAEL+ ++  T + + +E+   A+ +D ++  L +    F     DGEW L  +RNS+GSP LQKA          F NFDV   +F NI  ++GGK K+ A V Y E+  ++  ++   IV A V L  +  +PLPL  + G+L+F Y D+D+R+TRGNRGGLF H RP     + ++E
Sbjct:   80 GVAETKAELLSMLKETGLGKGEETEEQAKRIDQLVDVLASAGTKFDPKVADGEWALVLSRNSKGSPKLQKASNKAEKVGTSFANFDVSKGEFYNIADLFGGKGKLQATVAYGEVEGQDGRRISCDIVDASVKLWKLPTLPLPLRAKGGWLDFLYLDEDMRVTRGNRGGLFFHVRPDKLGEVTAKE 264          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A6T8LFK0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8LFK0_HEMAN)

HSP 1 Score: 122 bits (306), Expect = 4.990e-30
Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 0
Query:   80 GLARRKAELMRLILGTSIEE-KESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPG----DRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGY-EIRPEEPNKLVSTIVGAGVNLGPV-RVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRP 247
            G+A  KAEL+ ++  T + + +ES   A+ +D ++ +L      F     DGEW L  +RNS+GSP LQKA          F NFDV   +F NI  ++GGK K+ A V Y E+  +   ++   IV A + L  +  +PLPL  + G+L+F Y D+D+R+T+GNRGGLF H RP
Sbjct:   78 GVADTKAELLSILKETGLGKGEESEEQAKRIDELVSKLADAGTKFDPKVADGEWALVLSRNSKGSPKLQKASNKVEQVGTSFANFDVSKGEFYNIAELFGGKGKLQATVAYGEVEGKSGKRISCDIVDASIKLWKLPTLPLPLRAKGGWLDFLYLDEDMRVTKGNRGGLFFHVRP 252          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A7S0BAD5_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0BAD5_9DINO)

HSP 1 Score: 118 bits (295), Expect = 4.500e-28
Identity = 69/170 (40.59%), Postives = 102/170 (60.00%), Query Frame = 0
Query:   85 KAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRG--FQEDSVDGEWVLCFTRNSEGSPSLQK---ALPGDRGFQNFDVKAKQFTNIVRVWGG-KLKVVADVGYEIRPEEPNKLVSTIVGAGVNL-GPVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRP 247
            K EL   +  +   E E+  +A ++D +I  LE    G  F ++  DGEW L FTRN++GSP+LQK     PG   F NF V   +F N+V+ +G  + ++ A V Y    E+P+++   I  AG+ L G +++PLPL    G+L+F Y D D+RITRGN+GG+F+H RP
Sbjct:  120 KDELWAALRESEAGEAETRASAAKIDQLIKVLEGSPGGRRFSDELADGEWALVFTRNADGSPALQKLSRTKPGGT-FANFVVAQSRFENVVKFFGSDEARLSATVTYRRDAEKPSRISCDITDAGLQLFGWLQIPLPLRAEGGWLDFLYLDPDMRITRGNKGGVFVHVRP 288          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: L1IE14_GUITC (PAP_fibrillin domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE14_GUITC)

HSP 1 Score: 101 bits (252), Expect = 8.460e-23
Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 0
Query:   99 EKESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPG--DRG--FQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGP-VRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRP 247
            +++S    +++ + I EL   K  F   + DGEW L F ++S  SP+LQK      D G  F NFDVK   F N   V  G   + A V ++  P +  ++   I  A V +   + +PLPL  + G+L+F Y D D+R+TRGNRGG+F+H RP
Sbjct:   19 DEQSPSYLQDITSAIQELSASKCKFDSQTADGEWQLVFQQDSSDSPALQKFTRATEDSGKTFANFDVKEGVFYNKASVLSGVADLQATVKFDTVPGKEERISCDITDARVTIANFLTIPLPLRVKGGWLDFLYLDKDLRVTRGNRGGIFVHVRP 172          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A7S4E9S8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9S8_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.600e-22
Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 0
Query:  120 KRGFQEDSVDGEWVLCFTRNSEGSPSLQKAL-------PGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLG--------PVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRP 247
            +R F E  + G W L +  + + +   QKAL       P D  F   D   K F N+ R+   ++ VVADV YE+    PN+L+S IV A + +          +R+PLPL G +G+L+ TY DD +R+TRGNRGGLF+H RP
Sbjct:  113 RRSFAEAKIQGPWRLKYQLDGKKAQRSQKALAPDKTGHPADSDFITDDKGRKVFRNVARLSKKRVAVVADVAYEVSEGIPNRLLSDIVAASIQIQVGKRFGIPTLRIPLPLKG-LGWLDVTYLDDKLRVTRGNRGGLFVHVRP 254          
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Match: A0A7S0Q407_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q407_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 1.390e-20
Identity = 61/147 (41.50%), Postives = 78/147 (53.06%), Query Frame = 0
Query:  115 ELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVK---AKQFTNIVRVWGGKLKVVADVGYE---IRPEEPNKLVSTIVGAGVNLG--------PVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRP 247
            E + +   F E +V G+W LC+  N+  +   QKAL     F NF V     K F NI  V   +L++VADV Y       E P +L S I GA   L          +R+PLPL G  G+L+ TY  D +RITRGNRGGLF+H RP
Sbjct:  109 EAQVVPLEFDERAVWGDWQLCWQLNTADATRSQKALSSRPQFSNFMVDEDGTKVFRNIAHVTRSRLRIVADVAYTPLAAGSETPGRLASVISGAHAELRLGRRFGLPRLRIPLPLKGE-GWLDLTYVSDKMRITRGNRGGLFVHLRP 254          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1971.6360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJM8_ECTSI2.120e-17096.50PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
A0A835YZD2_9STRA2.450e-5453.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D433_9EUGL1.870e-4145.09Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1IY75_9EUGL2.690e-4146.39Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0VW87_9CRYP9.820e-3138.92Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A6T8LFK0_HEMAN4.990e-3040.00Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0BAD5_9DINO4.500e-2840.59Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
L1IE14_GUITC8.460e-2337.66PAP_fibrillin domain-containing protein n=2 Tax=Gu... [more]
A0A7S4E9S8_9STRA2.600e-2239.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0Q407_9EUKA1.390e-2041.50Hypothetical protein n=2 Tax=Coccolithus braarudii... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 85..242
e-value: 7.4E-13
score: 48.9
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 26..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.605
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1971contigEcto-sp13_S_contig1971:7388..11639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1971.6360.1mRNA_Ecto-sp13_S_contig1971.6360.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1971 7305..12600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1971.6360.1 ID=prot_Ecto-sp13_S_contig1971.6360.1|Name=mRNA_Ecto-sp13_S_contig1971.6360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=259bp
MGKSPLLAAIAAAVVFFDTLNCASGFIITPTALSLRRCRSCFPTSNLKAA
EGATETPETESEATAPPAAESEASPSSSLGLARRKAELMRLILGTSIEEK
ESAGAAEEVDAIIGELETLKRGFQEDSVDGEWVLCFTRNSEGSPSLQKAL
PGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIV
GAGVNLGPVRVPLPLTGRVGYLEFTYQDDDIRITRGNRGGLFLHTRPGSA
FPLDSEEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP