prot_Ecto-sp13_S_contig19582.6311.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19582.6311.1
Unique Nameprot_Ecto-sp13_S_contig19582.6311.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length164
Homology
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A6H5KS17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS17_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 3.270e-109
Identity = 158/164 (96.34%), Postives = 161/164 (98.17%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMPINFRN 164
            TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKV+RVISKARWGKDPNTVLTGSADGFVRVWD+RSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDT  D SE+KRHTMPINFRN
Sbjct:   35 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVARVISKARWGKDPNTVLTGSADGFVRVWDIRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTG-DLSEVKRHTMPINFRN 197          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: D8LST9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST9_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 2.800e-99
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDT 146
            TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDT
Sbjct:   81 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDT 226          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A835YS18_9STRA (WD40-repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS18_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.960e-48
Identity = 86/164 (52.44%), Postives = 112/164 (68.29%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMPINFRN 164
            TASADFSARLWDA++G   HE+ HKHIVK V F+ D + LAT GHEGI+R+F  A P   P + +V    E T      I+K RWG +P+ +L+GS+DG VR+WD R+ E +++V+V GAVMD+E+S    I TVAAGD V F D A     +K+H MPINF+N
Sbjct:   82 TASADFSARLWDAISGKLTHEWPHKHIVKGVDFSQDSTTLATGGHEGIVRLFQVAQPDEEPRQFSV--SSERT-----TINKVRWGLEPHQLLSGSSDGAVRMWDARTLELLKEVRVEGAVMDMEVSKPMSIITVAAGDKVTFLD-ARTLEVIKQHQMPINFKN 237          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A7S2XYA9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA9_9STRA)

HSP 1 Score: 164 bits (414), Expect = 7.400e-47
Identity = 85/165 (51.52%), Postives = 117/165 (70.91%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRS-GE-KIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMPINFR 163
            TAS DFSA+LW+A++G ++H+FVH+HIVKTV FA DRSKL + G EG+LRIFD + P + P +       ++    S  ++KA WG + + V+TG++DG VR WD+RS G+  +++V V GAVMD+EMS D +  TVAAG  V+F  +AED S LK H MP+NFR
Sbjct:   78 TASGDFSAKLWNAISGEEMHQFVHRHIVKTVEFAPDRSKLISGGQEGLLRIFDLSRPEADPDQANHKQPDQQG---SLAVTKAVWGAEADLVVTGTSDGTVRTWDLRSLGDGPVKEVSVEGAVMDMEMSRDSRTVTVAAGTQVNFL-SAEDLSVLKAHQMPVNFR 238          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A7S2LD36_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LD36_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.720e-33
Identity = 74/170 (43.53%), Postives = 100/170 (58.82%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMD-------LEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMPINFR 163
            TAS DFS ++WDA+TG  +H F HKH+VKTV ++ D  +LAT GHEGILRIFD + P   P         +++ K    ISK  W  D +TVL    DG +R W+V   +  +++  A AV D       L +S  K+I TVAAG+ V FFD A    ++K H MPI+F+
Sbjct:   99 TASGDFSVQVWDAITGQSLHSFPHKHVVKTVDWSLDSKRLATGGHEGILRIFDMSQPKKEPLMF------DQSSKEKVSISKCNW-LDNSTVLAAGEDGNIRFWNVDETDPSKQLTKALAVGDSIRDMELLTLSSGKRILTVAAGEKVTFFDIASG-QQIKSHKMPIHFK 260          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: UPI0009E2011B (serine-threonine kinase receptor-associated protein-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2011B)

HSP 1 Score: 126 bits (316), Expect = 5.510e-32
Identity = 70/162 (43.21%), Postives = 93/162 (57.41%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSAD-GFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMPIN 161
            +ASADFSA++WDA+TG+++H F HKHIV+   F+ D   L T G E ILR+FD   P +PP EI   PG          I    W     T+L+   + G VR+WDVRSG+ I+ ++    V   E+S D +  T A G TV F+D A  F  +K HTMP N
Sbjct:   78 SASADFSAKVWDALTGDELHSFEHKHIVRACAFSEDTQMLLTGGFEKILRLFDLNRPDAPPREIDKSPGP---------IRTVAWLHSDQTILSSCTELGGVRLWDVRSGKIIQTLETTSPVTSAEVSQDGRYITTADGSTVKFWD-ANHFGLVKSHTMPCN 229          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A2I0WBD4_9ASPA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0WBD4_9ASPA)

HSP 1 Score: 125 bits (314), Expect = 1.120e-31
Identity = 71/160 (44.38%), Postives = 93/160 (58.13%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSAD-GFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMP 159
            +ASADFSA++WDA+TG+++H F HKHIV+   F+ D   L T G E ILR+FD   P +PPTEI   PG          I  A W     T+L+   D G VR+WDVRSGE I+ ++    V   E+S D +  T A G TV F+D A  F  +K + MP
Sbjct:   78 SASADFSAKVWDALTGDELHSFEHKHIVRACAFSEDTHMLLTGGLEKILRLFDLNRPDAPPTEIDKSPGS---------IRTAAWLHSDQTILSSCTDLGGVRLWDVRSGEIIQILETKSPVTSAEVSQDGRYITTADGSTVKFWD-ANHFGLVKSYNMP 227          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A7R9Z9Z2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z9Z2_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.390e-31
Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEK--IRKVQVAGAVMDLEMSW---DKKIATVAAGDTVHFFDTAEDFSELKRHTMPINFRN 164
            TAS DFS ++WDA+TG +++ F HKHIVK + F+ D  +LAT GHEG+LR++D   P + P  +       E  K++  I+K  W  D + +L   +DG +R WDV S E   +R +QV   V D+E+S     + + TVAAG  V+FFD +  +  ++ H MPI+FR+
Sbjct:  112 TASGDFSVKVWDAITGKELYAFPHKHIVKALDFSPDSRRLATGGHEGLLRVYDIGQPNAEPLAVPQL----EDKKIT--ITKCNW-LDDDVILAACSDGGIRFWDVSSKESNLLRTLQVDAEVRDMELSRLSSGECLLTVAAGTKVNFFDLST-YELVRSHPMPIHFRD 272          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A7S3ARF6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ARF6_9EUKA)

HSP 1 Score: 124 bits (310), Expect = 2.140e-31
Identity = 67/160 (41.88%), Postives = 98/160 (61.25%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMPI 160
            T S DFSA++WDA+TG+++ E  H+HIV+   ++AD + L T G E  LRIFD   P S P  +T   G   T KV R + +      P T LTGS D  VRVWDVR+  +++++   G V  +E+S D+K+ TVAAG  V F++T + +  +KR  +P+
Sbjct:   65 TCSGDFSAKVWDAITGDELLELKHRHIVRAADWSADSNTLVTGGKEAKLRIFDINQPESEPRIVT---GHTNTIKVVRFLPQ------PTTFLTGSEDKSVRVWDVRTDAEVKRIDFEGGVSSVELSRDQKMLTVAAGTEVSFWET-QTYQCIKRFNLPV 214          
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Match: A0A2I0AE58_9ASPA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AE58_9ASPA)

HSP 1 Score: 124 bits (312), Expect = 2.210e-31
Identity = 70/160 (43.75%), Postives = 93/160 (58.13%), Query Frame = 0
Query:    1 TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSAD-GFVRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDFSELKRHTMP 159
            +ASADFSA++WDA+TG+Q+H F HKHIV+   F+ D   L T G E ILRIFD   P +PP EI   PG          I  A W     T+L+   D G  R+WDVRSG+ I+ ++   +V   ++S D +  T A G TV F+D A  F  +K +TMP
Sbjct:   78 SASADFSAKVWDALTGDQLHSFEHKHIVRACAFSEDTHMLLTGGLEKILRIFDLNKPDAPPREIDKSPGS---------IRTATWLHSDQTILSSCTDLGGARLWDVRSGKIIQTLETKSSVTSADVSQDGRYITTADGSTVKFWD-ANHFGLVKTYTMP 227          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19582.6311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS17_9PHAE3.270e-10996.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LST9_ECTSI2.800e-99100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YS18_9STRA5.960e-4852.44WD40-repeat protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2XYA9_9STRA7.400e-4751.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2LD36_9STRA2.720e-3343.53Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
UPI0009E2011B5.510e-3243.21serine-threonine kinase receptor-associated protei... [more]
A0A2I0WBD4_9ASPA1.120e-3144.38Eukaryotic translation initiation factor 3 subunit... [more]
A0A7R9Z9Z2_9STRA1.390e-3140.83Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3ARF6_9EUKA2.140e-3141.88Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A2I0AE58_9ASPA2.210e-3143.75Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 60..105
e-value: 0.032
score: 23.4
coord: 15..53
e-value: 0.0014
score: 27.9
coord: 108..145
e-value: 41.0
score: 6.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 82..105
e-value: 0.011
score: 16.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..21
score: 9.005
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 80..114
score: 12.079
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..162
e-value: 9.3E-26
score: 92.4
NoneNo IPR availablePANTHERPTHR19877WD40 REPEAT PROTEINcoord: 1..161
NoneNo IPR availablePANTHERPTHR19877:SF4F9L1.42 PROTEINcoord: 1..161
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 92..106
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..114
score: 14.687
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19582contigEcto-sp13_S_contig19582:78..1646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19582.6311.1mRNA_Ecto-sp13_S_contig19582.6311.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19582 78..1646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19582.6311.1 ID=prot_Ecto-sp13_S_contig19582.6311.1|Name=mRNA_Ecto-sp13_S_contig19582.6311.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp
TASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILR
IFDTASPGSPPTEITVFPGGEETPKVSRVISKARWGKDPNTVLTGSADGF
VRVWDVRSGEKIRKVQVAGAVMDLEMSWDKKIATVAAGDTVHFFDTAEDF
SELKRHTMPINFRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf