prot_Ecto-sp13_S_contig19554.6299.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19554.6299.1
Unique Nameprot_Ecto-sp13_S_contig19554.6299.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length156
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19554.6299.1 vs. uniprot
Match: D7FH32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH32_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 2.520e-82
Identity = 137/156 (87.82%), Postives = 144/156 (92.31%), Query Frame = 0 
Query:    1 MAHPSIPASQLYEMARSIEANITIRTADWTKSKSLPTPLDAASFNNSPPSPPLFKRKSYKGLMFLLLIVALIFFVIDPTAAVFMILAVLAALFGAYSGSKTQQKRVRNAGWWMLNVASKRTLGSNGAGAGVYALSFFLGLQGT-GESSQTTSSYPY 155
            MAHPSIPASQLYEMARSIEANITIRTADW K KSLPT L+A SFNNSPPSPPLFKRKSYKGLMFLLLIV+LIFF ++PTAAVFM L+VLAALFGAYSGSKTQQKRVRNAG W+LN ASKRTLGSNGAGAGVYALSFFLGLQ T G SSQ+ SSYPY
Sbjct:  316 MAHPSIPASQLYEMARSIEANITIRTADWMKCKSLPTALNAGSFNNSPPSPPLFKRKSYKGLMFLLLIVSLIFFAVNPTAAVFMFLSVLAALFGAYSGSKTQQKRVRNAGSWILNAASKRTLGSNGAGAGVYALSFFLGLQNTDGSSSQSASSYPY 471
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BLAST of mRNA_Ecto-sp13_S_contig19554.6299.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.030e-54
Identity = 99/153 (64.71%), Postives = 113/153 (73.86%), Query Frame = 0 
Query:    1 MAHPSIPASQLYEMARSIEANITIRTADWTKSKSLPTPLDAASFNNSPPSPPLFKRKSYKGLMFLLLIVALIFFVIDPTAAVFMILAVLAALFGAYSGSKTQQKRVRNAGWWMLNVASKRTLGSNGAGAGVYALSFFLGLQGTGESSQTTSSY 153
            MAHPS+PASQLYEMARSIEANIT+R  DWTKSKSLPT LDA+ F+NS P                          +D TAAVFM+ AVL AL+GAYSGS+TQ++R+RNAGWW+ NV SK+TLGSNGAGAGVYA+S  LGLQGTGESSQT S Y
Sbjct:  226 MAHPSVPASQLYEMARSIEANITVRMTDWTKSKSLPTALDASRFDNSSPXXXXXXXXXXXXXXXXXXXXXXXXXAVDTTAAVFMVFAVLVALYGAYSGSRTQRRRIRNAGWWIFNV-SKKTLGSNGAGAGVYAISVILGLQGTGESSQTASYY 377
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19554.6299.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.680e-39
Identity = 84/152 (55.26%), Postives = 106/152 (69.74%), Query Frame = 0 
Query:    1 MAHPSIPASQLYEMARSIEANITIRTADWTKSKSLPTPLDAASFNNSPPSPPLFKRKSYKGLMFLLLIVALIFFVIDPTAAVFMILAVLAALFGAYSGSKTQQKRVR-NAGWWMLNVASKRTLGSNGAGAGVYALSFFLGLQ--GTGESSQT 149
            MA  S PAS+LYEMAR+I+ NITI+  +W   KSLP PL A  F N  P   L K+K YK L+F+LL+V+LIFF I+PTAAVFM++AV AA+FGAYSGSK+   R R +AG+ M    SK T+ +N  G  VY LSFFLG+   G+G+ S T
Sbjct:  174 MALASTPASKLYEMARAIDTNITIKANNWLSHKSLPNPLAAQPFRNQTPPQALIKQKPYKILVFILLVVSLIFFAINPTAAVFMLIAVFAAVFGAYSGSKSPVMRARKSAGFGMFGSGSKTTVSTNAFGLAVYLLSFFLGIGSIGSGDPSGT 325
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19554.6299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH32_ECTSI2.520e-8287.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA59_9PHAE1.030e-5464.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWP8_ECTSI1.680e-3955.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..58
NoneNo IPR availableTMHMMTMhelixcoord: 80..99
NoneNo IPR availableTMHMMTMhelixcoord: 59..76
NoneNo IPR availableTMHMMTMhelixcoord: 122..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19554contigEcto-sp13_S_contig19554:986..1726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19554.6299.1mRNA_Ecto-sp13_S_contig19554.6299.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19554 2..2161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19554.6299.1 ID=prot_Ecto-sp13_S_contig19554.6299.1|Name=mRNA_Ecto-sp13_S_contig19554.6299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp
MAHPSIPASQLYEMARSIEANITIRTADWTKSKSLPTPLDAASFNNSPPS
PPLFKRKSYKGLMFLLLIVALIFFVIDPTAAVFMILAVLAALFGAYSGSK
TQQKRVRNAGWWMLNVASKRTLGSNGAGAGVYALSFFLGLQGTGESSQTT
SSYPY*
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