prot_Ecto-sp13_S_contig19546.6296.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig19546.6296.1
Unique Name	prot_Ecto-sp13_S_contig19546.6296.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	160

Homology

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.520e-24
Identity = 65/122 (53.28%), Postives = 79/122 (64.75%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFL-CKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLESQ 121
            G YDEA  LY R++AIREKALGPDHPDVA  L N A L ++QV  I         + ++P    +L+    + V FL  +G YDEA  LY R++AI EKALGPDHPDVA  LNN A +LESQ
Sbjct:  428 GNYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWALLLEAQVRAIRIP----GSFLWYPIDSEALN----NRVLFLKAQGNYDEAGKLYERSLAISEKALGPDHPDVAQSLNNWALLLESQ 541

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 5.600e-24
Identity = 57/122 (46.72%), Postives = 87/122 (71.31%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQV-DCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLESQ 121
            GK++EAEPLY R++AI E+  GPDHP+VA+ L NLAGL ++Q+   + +Q+ S   +     +P++  + +  P   + +GKY+EAEPL+ R++AI E+  GPDHP+VA+ L+NLA +LESQ
Sbjct:   82 GKHEEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAGLLETQIMTSVVRQSHSVNSH-----EPSTDVLGLRQPD--VAQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLLESQ 196

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 8.150e-22
Identity = 57/121 (47.11%), Postives = 70/121 (57.85%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLESQ 121
            GKYDEAEPLY R++AI EK  GPDHPDVA+ L N   L             S   Y        +L   +P     + +GKYD+A PLY R++AI EK  GPDHPDVA  LNN A++L +Q
Sbjct:  352 GKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNNWVRLLSI--------CSSALKYLL------ALTTLLPVVPFLIFQGKYDQAGPLYDRSLAILEKVHGPDHPDVAQSLNNRAELLRAQ 458

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.120e-20
Identity = 54/121 (44.63%), Postives = 74/121 (61.16%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLESQ 121
            GK++EAE +Y  +++I +K  GPDHP++A+ L N AGL  SQ           A++        SL   +P      C+GKYD AEPLY+R++AIREK  GPDHP+VA+ LNN A+ L  Q
Sbjct:  339 GKFEEAETIYRHSMSILKKTHGPDHPEIATGLNNWAGLLSSQ--------HHEANF--------SLAFRVP------CQGKYDAAEPLYVRSLAIREKVYGPDHPEVATSLNNRAEFLRHQ 437

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.980e-19
Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPI-PSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLES 120
            GKY  A PLY R  AI+E  LGP+HP +A+ L N A L   QV  I  +T        F A  +++  P+ PS + F  +GK +EA PL  R++AI+E+ LGPDHPDVA+ LNNL  +LES
Sbjct: 1902 GKYAAAGPLYARCQAIQETVLGPEHPRLATTLSNWAALLYEQVT-IAPET-------LFSACCSAIGPPMTPSRLPFPFQGKLEEAGPLVKRSLAIKERVLGPDHPDVATSLNNLGCLLES 2014

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5JPL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL8_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.530e-18
Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLES 120
            GKY EA PLY R  AI+E  LGPDHP +A+ L N A L   Q            D   F    + L      PV F  +GK +EA  L+ R++AIREKALGPDHPDVA+ LNNL+ +LES
Sbjct:   22 GKYTEAGPLYARCQAIQEAVLGPDHPRLATTLGNWAALLYEQ------------DVPTFAMTSSRL------PVTF--QGKPEEAGALFNRSLAIREKALGPDHPDVATSLNNLSCLLES 121

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.550e-18
Identity = 55/121 (45.45%), Postives = 69/121 (57.02%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLESQ 121
            GK+ EAE LY R+++I EK  GPDHP+VA+ L N+A L +SQ    G                 S D  + S       GK  EA PL+ +++ IREK LGP+HPDVA  LNNLA VL SQ
Sbjct:    7 GKFHEAESLYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWG-----------------SSDKFLGS-----TSGKCVEAVPLHRQSLGIREKTLGPEHPDVAESLNNLAGVLRSQ 105

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 7.970e-16
Identity = 55/137 (40.15%), Postives = 73/137 (53.28%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQ----------------VDCIGQQT-DSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLES 120
            G + EA+P  +RAI I EK LGP+HPD+A  L N A L ++Q                V+  GQ   +     C  P   T+L   +P    F  +GK+ EAEPLY RA  I E ALGP+HP +A+ LNN A +L +
Sbjct:  644 GNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLRAQLLNNPRTGLLKAQGGVVESAGQGVVEQLFARCQSPLALTTLLTYLP----FTSQGKFAEAEPLYRRATEIWETALGPEHPQMATALNNRAGLLSN 776

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.490e-15
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 0

Query:   14 IAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLESQ 121
            +AIREK LGP+HPDVA+ L N AGL +     I         +  F  K  S   P     H + +GKY EAEPLY R  A++ KALGP+HP +A+ LNN A++L +Q
Sbjct:  135 MAIREKVLGPEHPDVAASLNNRAGLLRKCFSTI--------PFTIFTLKHDSSRYP-----HCI-QGKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELLRAQ 228

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BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Match: A0A6H5K2T5_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.450e-14
Identity = 51/121 (42.15%), Postives = 64/121 (52.89%), Query Frame = 0

Query:    1 GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQTDSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKALGPDHPDVASCLNNLADVLESQ 121
            GKY EA+PL++RAI IRE+ L PDH D+A  L N A L  +Q               F   K      PI        +GKY EA+PL +RA+ I +  LGPDHPD+A  L N A +L  Q
Sbjct:  495 GKYAEADPLFLRAIDIRERTLDPDHHDLAVWLGNRAVLLANQS--------------FLAWKTVLKRFPI------TLQGKYAEADPLILRAMDIGKSPLGPDHPDLALWLGNRACLLGQQ 595

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig19546.6296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K4D0_9PHAE	1.520e-24	53.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G180_ECTSI	5.600e-24	46.72	TPR repeat-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KIY6_9PHAE	8.150e-22	47.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J9V8_9PHAE	1.120e-20	44.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KHN5_9PHAE	1.980e-19	47.11	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JPL8_9PHAE	2.530e-18	48.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LI51_9PHAE	3.550e-18	45.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJK0_9PHAE	7.970e-16	40.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUC1_9PHAE	2.490e-15	45.37	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K2T5_9PHAE	5.450e-14	42.15	PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=E...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002151	Kinesin light chain	PRINTS	PR00381	KINESINLIGHT	coord: 2..20 score: 34.74 coord: 141..160 score: 40.91 coord: 106..126 score: 60.0
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 108..141 e-value: 6.9E-4 score: 28.9
None	No IPR available	PFAM	PF13424	TPR_12	coord: 78..140 e-value: 4.6E-20 score: 71.7 coord: 1..39 e-value: 1.5E-9 score: 38.0
None	No IPR available	PANTHER	PTHR45783:SF3	KINESIN LIGHT CHAIN	coord: 79..158
None	No IPR available	PANTHER	PTHR45783:SF3	KINESIN LIGHT CHAIN	coord: 1..42
None	No IPR available	PANTHER	PTHR45783	FAMILY NOT NAMED	coord: 1..42 coord: 79..158
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..52 e-value: 4.7E-14 score: 54.1 coord: 75..160 e-value: 1.8E-35 score: 124.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 77..159
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 108..141 score: 9.261
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..20 score: 8.25

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig19546	contig	Ecto-sp13_S_contig19546:517..1883 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig19546.6296.1	mRNA_Ecto-sp13_S_contig19546.6296.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig19546 517..1883 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig19546.6296.1 ID=prot_Ecto-sp13_S_contig19546.6296.1|Name=mRNA_Ecto-sp13_S_contig19546.6296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
GKYDEAEPLYIRAIAIREKALGPDHPDVASCLKNLAGLRQSQVDCIGQQT
DSGADYCFFPAKPTSLDVPIPSPVHFLCKGKYDEAEPLYIRAIAIREKAL
GPDHPDVASCLNNLADVLESQGKYDEAEPLYIRAIAIREKALGPDHPDVA
GFLNNQAHLL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002151	Kinesin_light
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom