prot_Ecto-sp13_S_contig19533.6290.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19533.6290.1
Unique Nameprot_Ecto-sp13_S_contig19533.6290.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 4.770e-14
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query:    1 MSCAKDNRTLLWDLFSLKPVYELPPGGGAELP 32
            MSCAKDNRTLLWDLFSLKPVYELPPGGGAELP
Sbjct:  297 MSCAKDNRTLLWDLFSLKPVYELPPGGGAELP 328          
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.120e-13
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0
Query:    1 MSCAKDNRTLLWDLFSLKPVYELPPGGGAELP 32
            MSCAKDNRTLLWDLFSLKPVYELPPG GAELP
Sbjct:  282 MSCAKDNRTLLWDLFSLKPVYELPPGAGAELP 313          
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Match: A0A482RVV6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVV6_9ARCH)

HSP 1 Score: 50.1 bits (118), Expect = 4.950e-6
Identity = 23/37 (62.16%), Postives = 26/37 (70.27%), Query Frame = 0
Query:    1 MSCAKDNRTLLWDLFSLKPVYELP-----PGGGAELP 32
            +SC KDNRT+LWDLF L+PVYELP     P   A LP
Sbjct:  208 LSCGKDNRTILWDLFHLQPVYELPFKEAAPSHNASLP 244          
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Match: A0A7S2W3A2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W3A2_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 4.380e-5
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    1 MSCAKDNRTLLWDLFSLKPVYELPPGGGA 29
            +SCAKDNRTLLWDL+S K VYEL  GGG+
Sbjct:  278 LSCAKDNRTLLWDLYSGKAVYEL--GGGS 304          
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Match: A0A7S2W3V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W3V7_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 4.380e-5
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    1 MSCAKDNRTLLWDLFSLKPVYELPPGGGA 29
            +SCAKDNRTLLWDL+S K VYEL  GGG+
Sbjct:  278 LSCAKDNRTLLWDLYSGKAVYEL--GGGS 304          
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Match: A0A7S4EAB3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAB3_9STRA)

HSP 1 Score: 46.6 bits (109), Expect = 8.210e-5
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    2 SCAKDNRTLLWDLFSLKPVYELPPGGGAE 30
            SCA+DN+TLLWDL + + VYELP GGGAE
Sbjct:  288 SCARDNKTLLWDLSTQQAVYELP-GGGAE 315          
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Match: A0A7S2XZL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL8_9STRA)

HSP 1 Score: 46.6 bits (109), Expect = 8.250e-5
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0
Query:    1 MSCAKDNRTLLWDLFSLKPVYELP 24
            +SC KDNRTLLWDLF L+ VYELP
Sbjct:  287 LSCGKDNRTLLWDLFRLEAVYELP 310          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19533.6290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KCD9_9PHAE4.770e-14100.00WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LBR5_ECTSI3.120e-1396.88Vesicle coat complex COPII, subunit SEC31 n=1 Tax=... [more]
A0A482RVV6_9ARCH4.950e-662.16Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S2W3A2_9STRA4.380e-575.86Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2W3V7_9STRA4.380e-575.86Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S4EAB3_9STRA8.210e-572.41Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2XZL8_9STRA8.250e-579.17Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19533contigEcto-sp13_S_contig19533:1260..1762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19533.6290.1mRNA_Ecto-sp13_S_contig19533.6290.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19533 414..1777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19533.6290.1 ID=prot_Ecto-sp13_S_contig19533.6290.1|Name=mRNA_Ecto-sp13_S_contig19533.6290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
MSCAKDNRTLLWDLFSLKPVYELPPGGGAELPV*
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