prot_Ecto-sp13_S_contig19524.6285.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19524.6285.1
Unique Nameprot_Ecto-sp13_S_contig19524.6285.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length65
Homology
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: D7FW88_ECTSI (40S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW88_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 6.280e-39
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 64
            SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL
Sbjct:   18 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: A0A1Z5KP36_FISSO (40S ribosomal protein S21 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP36_FISSO)

HSP 1 Score: 80.5 bits (197), Expect = 1.860e-18
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 60
            S+TNRL+QAKDH++ QINV  +DPV+G  TG+S+VY LAGY+R + E D ALT LV  KD
Sbjct:   18 SYTNRLIQAKDHAAVQINVANVDPVTGIMTGDSNVYCLAGYIRFKSEGDMALTSLVRAKD 77          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: G4ZUD9_PHYSP (40S ribosomal protein S21 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZUD9_PHYSP)

HSP 1 Score: 79.3 bits (194), Expect = 4.660e-18
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 60
            SWTNR+L AKDH+S QINVG+++  +G FTGESD YALAGY+R  GE D+A+T L  + D
Sbjct:   18 SWTNRILAAKDHASVQINVGRVN-ANGVFTGESDTYALAGYIRHHGEGDQAITELARQTD 76          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: K3WSU9_GLOUD (40S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU9_GLOUD)

HSP 1 Score: 77.4 bits (189), Expect = 2.690e-17
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 60
            SWTNR+L AKDH+S QINV +++  +G FTGESD +ALAGY+R +GEAD ALT L  + D
Sbjct:   18 SWTNRILAAKDHASVQINVARVN-ANGVFTGESDTFALAGYIRSKGEADLALTELARQAD 76          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: A0A448Z9N0_9STRA (40S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9N0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.280e-16
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 60
            +WTNRL++AKDHSS Q+NV  +DPV+G  TG++  Y L GY+R   E D ALT LV K D
Sbjct:   18 NWTNRLVEAKDHSSVQVNVANVDPVTGLATGDATPYCLVGYIRKISEGDMALTALVEKND 77          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: A0A7S1UVR1_9STRA (40S ribosomal protein S21 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UVR1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.920e-16
Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 60
            S+TNRL+ AKDHSS QINV  +DPV+G  TG+   Y L GYLR + E D ALT L+ KKD
Sbjct:   18 SYTNRLVSAKDHSSVQINVANVDPVTGIATGDYTPYCLCGYLRFKSEGDMALTTLITKKD 77          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: A0A0P1AAL2_PLAHL (40S ribosomal protein S21 n=16 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AAL2_PLAHL)

HSP 1 Score: 75.1 bits (183), Expect = 2.210e-16
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 60
            SWTNR+L AKDH+S QINVG+++  +G FTGESD +ALAGY+R  GE D A+T L  + D
Sbjct:   18 SWTNRILAAKDHASVQINVGRVN-ANGVFTGESDTFALAGYIRHHGEGDIAITELSRQAD 76          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: A0A067BLB8_SAPPC (40S ribosomal protein S21 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLB8_SAPPC)

HSP 1 Score: 75.1 bits (183), Expect = 2.210e-16
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDE 61
            SWTNR+L AKDH+S QI V ++D  +G +TG +DVYALAGY+R +GE D ALT L  + +E
Sbjct:   18 SWTNRILAAKDHASVQIAVAQVD-ANGVYTGHNDVYALAGYIRNKGEGDHALTELARRAEE 77          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: A0A1E7F2P4_9STRA (40S ribosomal protein S21 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2P4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.670e-16
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 60
            +WTNRL++AKDHSS QINV  +DPV+G  TG++  Y L GY+R   E D ALT LV K D
Sbjct:   18 NWTNRLVEAKDHSSVQINVANVDPVTGMATGDATPYCLVGYIRMVSEGDMALTQLVKKND 77          
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Match: F0YCY8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCY8_AURAN)

HSP 1 Score: 73.2 bits (178), Expect = 1.270e-15
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDES 62
            SWTNRL++A D +S QINVG +D  +G +T     YAL+GY+R +GE+D ALT LV K DE+
Sbjct:   17 SWTNRLIEAFDKASVQINVGSIDANTGLYTNTYKTYALSGYVRNKGESDMALTDLVRKSDEA 78          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19524.6285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW88_ECTSI6.280e-39100.0040S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID... [more]
A0A1Z5KP36_FISSO1.860e-1861.6740S ribosomal protein S21 n=1 Tax=Fistulifera sola... [more]
G4ZUD9_PHYSP4.660e-1861.6740S ribosomal protein S21 n=7 Tax=Peronosporaceae ... [more]
K3WSU9_GLOUD2.690e-1761.6740S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID... [more]
A0A448Z9N0_9STRA1.280e-1656.6740S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia... [more]
A0A7S1UVR1_9STRA1.920e-1660.0040S ribosomal protein S21 n=1 Tax=Grammatophora oc... [more]
A0A0P1AAL2_PLAHL2.210e-1660.0040S ribosomal protein S21 n=16 Tax=Peronosporaceae... [more]
A0A067BLB8_SAPPC2.210e-1657.3840S ribosomal protein S21 n=5 Tax=Saprolegniaceae ... [more]
A0A1E7F2P4_9STRA3.670e-1658.3340S ribosomal protein S21 n=1 Tax=Fragilariopsis c... [more]
F0YCY8_AURAN1.270e-1554.84Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 1..60
e-value: 5.2E-20
score: 71.4
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 1..59
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 1..63
e-value: 3.2E-19
score: 70.6
NoneNo IPR availablePRODOMPD006584coord: 7..58
e-value: 1.0E-8
score: 136.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19524contigEcto-sp13_S_contig19524:329..1818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19524.6285.1mRNA_Ecto-sp13_S_contig19524.6285.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19524 329..2456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19524.6285.1 ID=prot_Ecto-sp13_S_contig19524.6285.1|Name=mRNA_Ecto-sp13_S_contig19524.6285.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
SWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADE
ALTCLVNKKDESEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001931Ribosomal_S21e
IPR038579Ribosomal_S21e_sf