prot_Ecto-sp13_S_contig19509.6277.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19509.6277.1
Unique Nameprot_Ecto-sp13_S_contig19509.6277.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19509.6277.1 vs. uniprot
Match: D7G897_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G897_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 3.820e-30
Identity = 69/84 (82.14%), Postives = 69/84 (82.14%), Query Frame = 0 
Query:   34 MKSQPRAAPVSARAIATNAPSASASNTAANATSAVPAATALGGSLSTQDVSFRGRRGHGNRVKHSSINVPKAPAIVAVCEVIDR 117
            MK QPRAA V ARAIATNA SASASNTAANATSAVPA TA GGSLSTQ VS RG  GHGNRVK S INV KAP I AVCEVIDR
Sbjct:    1 MKRQPRAALVPARAIATNAASASASNTAANATSAVPAVTAFGGSLSTQGVSLRGHGGHGNRVKQSYINVAKAPTIHAVCEVIDR 84
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BLAST of mRNA_Ecto-sp13_S_contig19509.6277.1 vs. uniprot
Match: D7G895_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G895_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.420e-9
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0 
Query:   54 SASASNTAANATSAVPAATALGGSLSTQDVSFRGRRGHGNRVKHSSINVPKAPAIVAVCEVIDR 117
            SA  S TA N T   P+AT+  GSLSTQ V+FRG  G+ N V   ++N P+APAIVAVCEVIDR
Sbjct:  207 SARGSITAVNPTGIAPSATSFVGSLSTQGVAFRGVSGNRNTVDPPAVNAPQAPAIVAVCEVIDR 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19509.6277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G897_ECTSI3.820e-3082.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G895_ECTSI1.420e-959.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19509contigEcto-sp13_S_contig19509:8..361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19509.6277.1mRNA_Ecto-sp13_S_contig19509.6277.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19509 8..2863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19509.6277.1 ID=prot_Ecto-sp13_S_contig19509.6277.1|Name=mRNA_Ecto-sp13_S_contig19509.6277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
MIHGAAEGKDIYMTASPSKAVAYTLDDSWVRDTMKSQPRAAPVSARAIAT
NAPSASASNTAANATSAVPAATALGGSLSTQDVSFRGRRGHGNRVKHSSI
NVPKAPAIVAVCEVIDR*
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