prot_Ecto-sp13_S_contig1950.6275.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1950.6275.1
Unique Nameprot_Ecto-sp13_S_contig1950.6275.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length181
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1950.6275.1 vs. uniprot
Match: A0A6H5KJ84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ84_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 6.380e-56
Identity = 96/109 (88.07%), Postives = 99/109 (90.83%), Query Frame = 0 
Query:   72 MAAFLRDENCTQADFAAVLTRAHAEGAHGKESLGSLVIETMTAVDDFESFTNFMNNAVAGEHEDNSDAAPEIAAVQDGEEESKRCQLESDSSDGCNEGAADTAARRRRK 180
            MAAFLRDENCTQADFAAVLTRAHAEGA GKESLGSLVIETMTAVD+FESFTNFMNN VAGEHEDNSD AP+   VQDGEEESKRC+LESD SDG NEGAADTA R RRK
Sbjct:    1 MAAFLRDENCTQADFAAVLTRAHAEGALGKESLGSLVIETMTAVDEFESFTNFMNNTVAGEHEDNSDGAPDYTTVQDGEEESKRCRLESDGSDGSNEGAADTAVRSRRK 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1950.6275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ84_9PHAE6.380e-5688.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042541BART domain superfamilyGENE3D1.20.58.1900coord: 47..131
e-value: 3.8E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1950contigEcto-sp13_S_contig1950:11139..14154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1950.6275.1mRNA_Ecto-sp13_S_contig1950.6275.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1950 11139..14154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1950.6275.1 ID=prot_Ecto-sp13_S_contig1950.6275.1|Name=mRNA_Ecto-sp13_S_contig1950.6275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp
MNDCTYNRLVNSCVDHFLEVLGPQLDRWAETKASRWKDNVEDEQAIEDEG
HTHWQARTLKRFKLAKLFEQVMAAFLRDENCTQADFAAVLTRAHAEGAHG
KESLGSLVIETMTAVDDFESFTNFMNNAVAGEHEDNSDAAPEIAAVQDGE
EESKRCQLESDSSDGCNEGAADTAARRRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042541BART_sf