prot_Ecto-sp13_S_contig19493.6270.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19493.6270.1
Unique Nameprot_Ecto-sp13_S_contig19493.6270.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: D7FKY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY9_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.790e-26
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQ 53
            MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQ
Sbjct:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQ 53          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: W7U0Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Z4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.030e-11
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    6 FATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAE 47
            F  ++++ VPA  VVGA MELFMLNTGFYDVALRKEAERR E
Sbjct:    4 FLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVE 45          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: K8Z8J1_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8J1_NANGC)

HSP 1 Score: 62.4 bits (150), Expect = 2.440e-11
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    6 FATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAE 47
            F  ++++ VPA  VVGA MELFMLNTGFYDVALRKEAERR E
Sbjct:   39 FLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVE 80          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: A0A6G0WTV1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTV1_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.020e-8
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEE 51
            M+ +     +++ VPA FVVGAGMELFM+ TGFYD+  + EAE RA+ + E
Sbjct:    1 MAQASLRPFLVKLVPACFVVGAGMELFMVKTGFYDIVTKNEAEIRAQKKAE 51          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: A0A485L2A5_9STRA (Aste57867_14693 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2A5_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 9.880e-8
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0
Query:   10 MLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAE 47
            +++ VPA FVVGAGMELFM+ TGFYD+  + EAE RA+
Sbjct:   12 LIKLVPACFVVGAGMELFMVKTGFYDIVTKNEAEIRAQ 49          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: A0A1V9ZUD2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUD2_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.300e-7
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    4 SKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAE----RRAEAEE 50
            +  A ++ + VPA FV+GAGME+FM+ TGFYD+  + EAE    +RAE EE
Sbjct:    8 ASIAPLLRKLVPACFVIGAGMEVFMVKTGFYDIVTKNEAEIRAIKRAEREE 58          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: A0A836CCA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA3_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 4.480e-7
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
Query:   16 ASFVVGAGMELFMLNTGFYDVALRKEAER 44
            A+FV GAGMELFM+ TGFYDVA RKEAER
Sbjct:   15 AAFVTGAGMELFMIKTGFYDVATRKEAER 43          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: A0A482S9C6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9C6_9ARCH)

HSP 1 Score: 50.8 bits (120), Expect = 5.180e-7
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERR 45
            MSS+     + + VP  FV+GAGMELFM+ TGFY +  RKEAERR
Sbjct:    1 MSSNIIFQDLKRIVPICFVLGAGMELFMIKTGFYTIVTRKEAERR 45          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: W4GX85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX85_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 2.370e-6
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0
Query:   10 MLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAE 47
            +++ VP  FVVGAG+ELFM+ TGFYD+  + EAE RA+
Sbjct:   11 LVKLVPVCFVVGAGVELFMVKTGFYDIVTKNEAEVRAQ 48          
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Match: A0A067BUH6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BUH6_SAPPC)

HSP 1 Score: 48.5 bits (114), Expect = 3.600e-6
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0
Query:   14 VPASFVVGAGMELFMLNTGFYDVALRKEAERRA 46
            VPA FV+G GME+FM+ TGFYD+  R EAE RA
Sbjct:   18 VPACFVIGMGMEVFMVKTGFYDIVARNEAEIRA 50          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19493.6270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FKY9_ECTSI1.790e-26100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7U0Z4_9STRA1.030e-1173.81Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
K8Z8J1_NANGC2.440e-1173.81Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A6G0WTV1_9STRA5.020e-850.98Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485L2A5_9STRA9.880e-863.16Aste57867_14693 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZUD2_9STRA4.300e-750.98Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A836CCA3_9STRA4.480e-782.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482S9C6_9ARCH5.180e-757.78Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
W4GX85_9STRA2.370e-657.89Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A067BUH6_SAPPC3.600e-666.67Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36377:SF1DNA MISMATCH REPAIR PROTEINcoord: 3..51
NoneNo IPR availablePANTHERPTHR36377FAMILY NOT NAMEDcoord: 3..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19493contigEcto-sp13_S_contig19493:1877..3281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19493.6270.1mRNA_Ecto-sp13_S_contig19493.6270.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19493 1877..3281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19493.6270.1 ID=prot_Ecto-sp13_S_contig19493.6270.1|Name=mRNA_Ecto-sp13_S_contig19493.6270.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEE
EYQ
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