prot_Ecto-sp13_S_contig1949.6266.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1949.6266.1
Unique Nameprot_Ecto-sp13_S_contig1949.6266.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1949.6266.1 vs. uniprot
Match: A0A6H5L454_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L454_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 1.210e-127
Identity = 186/201 (92.54%), Postives = 190/201 (94.53%), Query Frame = 0 
Query:    1 MSGERAKLVGLGLVLAVIARSYIKSDVFTHGVMMSSTARFFEDNLCEGRQPADRDDCKATLATALAPAKLSCMSAFHDFVLCQHPAEGGGGDGNKRRCRKEQQKRFECLQAHLRPYGFSDEEIVRLLYKTQQQPPPQSKPSVEVSDHGREGDEKAKANENPAEGEDAGGKSANRGDEADVEKGGPKVEVEHEPKQGGGGAR 201
            MSGERAKLVGLGLVLAVIARSYIKSDVFTHGVMMSSTARFFEDNLCEGRQPADRDDCKATLAT LAPAKLSCMSAFHDFVLCQHPAEGGG DGNKRRC+KEQQKRFECLQAHLRP+GFSDEEI+RLLYKTQQQPPPQSKPSVEVSDH REGDEKAK NE P EGE+AGGK  NRGDE  VEKGGPKVE EHEPKQGGGGAR
Sbjct:    1 MSGERAKLVGLGLVLAVIARSYIKSDVFTHGVMMSSTARFFEDNLCEGRQPADRDDCKATLATVLAPAKLSCMSAFHDFVLCQHPAEGGG-DGNKRRCQKEQQKRFECLQAHLRPHGFSDEEIIRLLYKTQQQPPPQSKPSVEVSDHVREGDEKAKVNEKPGEGENAGGKGVNRGDETVVEKGGPKVEEEHEPKQGGGGAR 200
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BLAST of mRNA_Ecto-sp13_S_contig1949.6266.1 vs. uniprot
Match: D7FI02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI02_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 1.290e-109
Identity = 167/203 (82.27%), Postives = 175/203 (86.21%), Query Frame = 0 
Query:    1 MSGERAKLVGLGLVLAVIARSYIKSDVFTHGVMMSSTARFFEDNLCEGRQPADRDDCKATLATALAPAKLSCMSAFHDFVLCQHPAEGGGGDG--NKRRCRKEQQKRFECLQAHLRPYGFSDEEIVRLLYKTQQQPPPQSKPSVEVSDHGREGDEKAKANENPAEGEDAGGKSANRGDEADVEKGGPKVEVEHEPKQGGGGAR 201
            MSGERAKLV LGLVLAVIARSYI SDVFT G MMSST  FFEDNLC+GR PADRD CKATLATALAPAKLSCMS FHDFV C+ PA+GG      N   C+KE QK FECLQAHL PYGFSDEEI RL+YKTQQQPPP SKPSVEVSDHGREGDEKAKANE P EG++AGGKSANRG+E DVEKGGPKVEVEHEPKQGGGGAR
Sbjct:    1 MSGERAKLVVLGLVLAVIARSYIMSDVFTRGYMMSSTLGFFEDNLCKGRPPADRDGCKATLATALAPAKLSCMSVFHDFVRCRDPADGGXXXXXRNNLPCQKENQKIFECLQAHLAPYGFSDEEIFRLIYKTQQQPPPPSKPSVEVSDHGREGDEKAKANEKPGEGDNAGGKSANRGEETDVEKGGPKVEVEHEPKQGGGGAR 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1949.6266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L454_9PHAE1.210e-12792.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI02_ECTSI1.290e-10982.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1949contigEcto-sp13_S_contig1949:5493..7608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1949.6266.1mRNA_Ecto-sp13_S_contig1949.6266.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1949 5493..7608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1949.6266.1 ID=prot_Ecto-sp13_S_contig1949.6266.1|Name=mRNA_Ecto-sp13_S_contig1949.6266.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
MSGERAKLVGLGLVLAVIARSYIKSDVFTHGVMMSSTARFFEDNLCEGRQ
PADRDDCKATLATALAPAKLSCMSAFHDFVLCQHPAEGGGGDGNKRRCRK
EQQKRFECLQAHLRPYGFSDEEIVRLLYKTQQQPPPQSKPSVEVSDHGRE
GDEKAKANENPAEGEDAGGKSANRGDEADVEKGGPKVEVEHEPKQGGGGA
R*
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