prot_Ecto-sp13_S_contig19484.6263.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19484.6263.1
Unique Nameprot_Ecto-sp13_S_contig19484.6263.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length54
Homology
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: A0A7S3CAL5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CAL5_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 5.010e-12
Identity = 24/51 (47.06%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    4 EVNDLCEIC-GFDTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPCS 53
            ++++LC++C G D++  N+IV+C++CN+ VHQ CYGI+E+P  EW C+ C+
Sbjct:  290 QISELCDVCYGGDSQEGNVIVFCDNCNVAVHQACYGIAEVPKGEWLCNKCA 340          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: A0A7S2X1K1_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2X1K1_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 5.030e-12
Identity = 24/51 (47.06%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    4 EVNDLCEIC-GFDTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPCS 53
            ++++LC++C G D++  N+IV+C++CN+ VHQ CYGI+E+P  EW C+ C+
Sbjct:  285 QISELCDVCYGGDSQEGNVIVFCDNCNVAVHQACYGIAEVPKGEWLCNKCA 335          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: H8ZEZ9_NEMS1 (Uncharacterized protein n=2 Tax=Nematocida sp. 1 TaxID=1155007 RepID=H8ZEZ9_NEMS1)

HSP 1 Score: 67.8 bits (164), Expect = 6.840e-12
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 EVPEVNDLCEICG-FDTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPC 52
            E  E+ + C ICG  +TE DN +++C+SCN+ VHQ+CYG+  IP   W C PC
Sbjct:   76 ECDELAEECNICGGMETEDDNFLIFCDSCNIAVHQSCYGVPHIPEGSWLCRPC 128          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: UPI000711F3CF (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711F3CF)

HSP 1 Score: 66.6 bits (161), Expect = 1.740e-11
Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    7 DLCEICGFD-TEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPC 52
            ++C+ICG   +EPD+++V+C+ CN+ VHQ CYGIS++P  EW CS C
Sbjct:   11 EVCDICGMGYSEPDDMLVFCDQCNIAVHQGCYGISKLPEGEWLCSVC 57          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: A0A177EH09_9MICR (Bromodomain and PHD finger-containing protein 1 n=1 Tax=Nematocida displodere TaxID=1805483 RepID=A0A177EH09_9MICR)

HSP 1 Score: 66.6 bits (161), Expect = 1.750e-11
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 EVPEVNDLCEICGF-DTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPC 52
            E  E++D C+ICG  +T  +N +V+C+ CN+GVHQ CYGI  IP   W C PC
Sbjct:   77 EKEELSDACDICGEQETTNENFLVFCDGCNIGVHQGCYGIPNIPEGNWLCRPC 129          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: A0A196SJ27_BLAHN (Jade-1 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJ27_BLAHN)

HSP 1 Score: 65.9 bits (159), Expect = 3.280e-11
Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 EVPEVNDLCEIC--GFDTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPCS 53
            EV E N++C+IC  G+ +EP +++V+C+ CN+ VHQ CYGI E+P  +W CS C+
Sbjct:  335 EVEEDNEVCDICREGY-SEPGDMLVFCDRCNIAVHQGCYGIKEVPEGDWVCSVCA 388          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: A0A8J6CC31_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CC31_DIALT)

HSP 1 Score: 65.5 bits (158), Expect = 3.680e-11
Identity = 26/52 (50.00%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    4 EVNDLCEICGFD-TEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPCSA 54
            E++D C ICG D +EP +LIV+C+ CN+ V Q+CY I+++P  +W+C PC A
Sbjct:   27 EIDDSCVICGNDESEPFDLIVFCDGCNVTVCQSCYSIADVPEGDWFCRPCEA 78          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: UPI0020073301 (bromodomain and PHD finger-containing protein 1 n=1 Tax=Nematocida major TaxID=1912982 RepID=UPI0020073301)

HSP 1 Score: 65.1 bits (157), Expect = 6.090e-11
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    4 EVNDLCEICGF-DTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPC 52
            E++D C ICG  +TE D+ +V+C+ CN+ VHQ+CYG+  IP   W C PC
Sbjct:   80 ELSDECNICGEKETEDDDFLVFCDGCNIAVHQSCYGVPNIPEGNWLCRPC 129          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: A0A6J8BJA8_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BJA8_MYTCO)

HSP 1 Score: 64.3 bits (155), Expect = 1.140e-10
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    5 VNDLCEICGFDTEPD-NLIVYCESCNMGVHQTCYGISEIPTKEWYCSPCS 53
            V++ C++CGF  + D N +VYCE CN+ VHQ CY I  +P  +W+C PCS
Sbjct:   78 VDEPCDVCGFKEKDDGNELVYCEECNVLVHQACYNIPVVPDDDWFCRPCS 127          
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Match: I3EEP1_NEMP3 (Uncharacterized protein n=3 Tax=Nematocida TaxID=586132 RepID=I3EEP1_NEMP3)

HSP 1 Score: 64.3 bits (155), Expect = 1.140e-10
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    4 EVNDLCEICGF-DTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCSPC 52
            ++++ C ICG  +TE DN +V+C+ CN+ VHQ+CYG+  IP   W C PC
Sbjct:   79 DLSEECNICGGKETEDDNFLVFCDGCNIAVHQSCYGVPHIPEGSWLCRPC 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19484.6263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3CAL5_9CHLO5.010e-1247.06Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7S2X1K1_9CHLO5.030e-1247.06Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
H8ZEZ9_NEMS16.840e-1249.06Uncharacterized protein n=2 Tax=Nematocida sp. 1 T... [more]
UPI000711F3CF1.740e-1153.19hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A177EH09_9MICR1.750e-1150.94Bromodomain and PHD finger-containing protein 1 n=... [more]
A0A196SJ27_BLAHN3.280e-1149.09Jade-1 n=1 Tax=Blastocystis sp. subtype 1 (strain ... [more]
A0A8J6CC31_DIALT3.680e-1150.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
UPI00200733016.090e-1150.00bromodomain and PHD finger-containing protein 1 n=... [more]
A0A6J8BJA8_MYTCO1.140e-1050.00Uncharacterized protein n=1 Tax=Mytilus coruscus T... [more]
I3EEP1_NEMP31.140e-1048.00Uncharacterized protein n=3 Tax=Nematocida TaxID=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 8..53
e-value: 1.1E-8
score: 44.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..54
e-value: 3.9E-18
score: 66.7
NoneNo IPR availablePFAMPF13831PHD_2coord: 20..52
e-value: 5.8E-14
score: 51.4
NoneNo IPR availablePANTHERPTHR13793PHD FINGER PROTEINScoord: 5..53
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 9..52
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 6..54
score: 9.979
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 5..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19484contigEcto-sp13_S_contig19484:2413..3010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19484.6263.1mRNA_Ecto-sp13_S_contig19484.6263.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19484 2413..3010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19484.6263.1 ID=prot_Ecto-sp13_S_contig19484.6263.1|Name=mRNA_Ecto-sp13_S_contig19484.6263.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp
EVPEVNDLCEICGFDTEPDNLIVYCESCNMGVHQTCYGISEIPTKEWYCS
PCSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD