prot_Ecto-sp13_S_contig19450.6251.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig19450.6251.1
Unique Name	prot_Ecto-sp13_S_contig19450.6251.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	213

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig19450.6251.1 vs. uniprot
Match: D8LAW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW7_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.770e-62
Identity = 171/214 (79.91%), Postives = 173/214 (80.84%), Query Frame = 0

Query:    1 TEDDLQDPDLLGELGEVSGGAEFDAAAPTNDYEGETAGEDASDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MVPAKPALPPRQPAATTASFRGSDSXXXXXXXXAATGEMARLEQELEALRHRALELKKAGDRAGALEAMRAARSADHELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQVR 213
            TEDDLQD DLLGELGEVSGGAEFDAAAPTN  EGET GE   DDXX         XXXXX              MVPAKPALPPRQPA+          XXXXXXXXAATGEMARLEQELE LRHRALELKKAGDRAGALEAMRAARSADHELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQV+
Sbjct:  133 TEDDLQDADLLGELGEVSGGAEFDAAAPTNTAEGETGGEYEDDDXXEAVEPDRESXXXXXEEDMLALGELEEEPMVPAKPALPPRQPASXXXXXXXXXXXXXXXXXXAATGEMARLEQELEILRHRALELKKAGDRAGALEAMRAARSADHELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQVK 346

[Close]

BLAST of mRNA_Ecto-sp13_S_contig19450.6251.1 vs. uniprot
Match: A0A6H5JQ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ36_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.370e-48
Identity = 150/232 (64.66%), Postives = 153/232 (65.95%), Query Frame = 0

Query:    1 TEDDLQDPDLLGELGEVSGGAEFDAAAPTNDYEGETAGEDASDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVPAKPALPPRQPAATTASFRG-------------------SDSXXXXXXXXAATGEMARLEQELEALRHRALELKKAGDRAGALEAMRAARSADHELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQVR 213
            TEDDLQDPDLLGELGEVSGGA+FD AAPTN  EGET GE A DD                              VP                                      SD    XXXXXAATGEMARLEQELE LRHRALELKKAGDRAGALEAMRAARSA+HELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQV+
Sbjct:  133 TEDDLQDPDLLGELGEVSGGADFDVAAPTNTTEGETGGEYADDDDDEAVEPDRESGSEVEEEDMLALGELEEHAVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGGGAXXXXXAATGEMARLEQELEVLRHRALELKKAGDRAGALEAMRAARSANHELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQVK 364

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig19450.6251.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig19450.6251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LAW7_ECTSI	1.770e-62	79.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JQ36_9PHAE	1.370e-48	64.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..132

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig19450	contig	Ecto-sp13_S_contig19450:988..3300 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig19450.6251.1	mRNA_Ecto-sp13_S_contig19450.6251.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig19450 988..3300 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig19450.6251.1 ID=prot_Ecto-sp13_S_contig19450.6251.1|Name=mRNA_Ecto-sp13_S_contig19450.6251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp
TEDDLQDPDLLGELGEVSGGAEFDAAAPTNDYEGETAGEDASDDGEAVEP
DRESESEVEEEDMLSLGELEEEPMVPAKPALPPRQPAATTASFRGSDSGG
GGGGGGAATGEMARLEQELEALRHRALELKKAGDRAGALEAMRAARSADH
ELAVMRTLETARKVATVRTEYVPPPSDEEEDDDEAPTPSPAGAGAGGGGG
KPVSAELVMKQVR