prot_Ecto-sp13_S_contig1945.6250.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1945.6250.1
Unique Nameprot_Ecto-sp13_S_contig1945.6250.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1945.6250.1 vs. uniprot
Match: D7FKC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC8_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.940e-24
Identity = 54/59 (91.53%), Postives = 55/59 (93.22%), Query Frame = 0 
Query:    3 GSDSQACEGAVALDSGDDGAHAMGSFLMPAQGTVFPVTAQAGGFFDAATSSADKGRLKV 61
            GS+SQACEGA ALDSGDDG HAM SFLMPAQGT FPVTAQAGGFFDAATSSADKGRLKV
Sbjct: 1298 GSNSQACEGAGALDSGDDGGHAMDSFLMPAQGTGFPVTAQAGGFFDAATSSADKGRLKV 1356
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BLAST of mRNA_Ecto-sp13_S_contig1945.6250.1 vs. uniprot
Match: A0A6H5L375_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L375_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.990e-21
Identity = 51/56 (91.07%), Postives = 52/56 (92.86%), Query Frame = 0 
Query:    1 AAGSDSQACEGAVALDSGDDGAHAMGSFLMPAQGTVFPVTAQAGGFFDAATSSADK 56
            A+GSDSQACEGAVA DSGDDGAHAMGSFLMPAQGT   VTAQAGGFFDAATSSADK
Sbjct: 1364 ASGSDSQACEGAVAQDSGDDGAHAMGSFLMPAQGTGLTVTAQAGGFFDAATSSADK 1419
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1945.6250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKC8_ECTSI3.940e-2491.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L375_9PHAE1.990e-2191.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1945contigEcto-sp13_S_contig1945:13913..14744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1945.6250.1mRNA_Ecto-sp13_S_contig1945.6250.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1945 13911..14744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1945.6250.1 ID=prot_Ecto-sp13_S_contig1945.6250.1|Name=mRNA_Ecto-sp13_S_contig1945.6250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
AAGSDSQACEGAVALDSGDDGAHAMGSFLMPAQGTVFPVTAQAGGFFDAA
TSSADKGRLKVRDPRLFDPCSMRRRPDSDF
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