prot_Ecto-sp13_S_contig19449.6248.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19449.6248.1
Unique Nameprot_Ecto-sp13_S_contig19449.6248.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length94
Homology
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: D7G7G8_ECTSI (Similar to vacuolar protein sorting 24 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G8_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 5.890e-49
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0
Query:    2 ALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 94
            ALI+VTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGL+LTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE
Sbjct:   97 ALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLSLTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 189          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A2R5GMG8_9STRA (Charged multivesicular body protein 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMG8_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 9.390e-18
Identity = 46/95 (48.42%), Postives = 72/95 (75.79%), Query Frame = 0
Query:    1 SALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALT-DAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 94
            +A +R+  V++ ST++MA++  LVK+PE+ +NM ++A EMERAGL+EE++ D +  T D EG+D +ADA VD++IAE+T G+L+ A  APT  P+
Sbjct:  105 AAQMRMAQVMQSSTKVMAAMNSLVKMPEVAKNMQEMAMEMERAGLIEEIMDDAMESTFDDEGMDGEADAAVDQIIAELTTGLLDKAPAAPTTAPK 199          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A8J2S9J1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.470e-16
Identity = 40/94 (42.55%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    1 SALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 94
            +A++R  G +KKSTE+M  +  LVK+PELQ+ M ++  EMER+GL+EEVV D L   D + ++ + + +V+KV+ E+   + +G  DAP  +PE
Sbjct:   98 AAMVRAAGCMKKSTEVMRCMNKLVKLPELQKTMMEMQREMERSGLIEEVVGDALDELDGDDVEEETELQVNKVVEELAGDLFKGQTDAPETLPE 191          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A835ZDQ5_9STRA (Vacuolar protein-like protein sorting 24 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.930e-16
Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 0
Query:    2 ALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 94
            AL++VTG + KSTE+M  +G LV IPELQ  M  LA EMERAGL EE++ D +  T     D + D EV+KV+AEIT   + GA +AP   P+
Sbjct:   91 ALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNED-EVDQEVEKVLAEITATTMAGAEEAPVGEPQ 182          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A8H7D1K3_9AGAR (Vacuolar sorting protein VPS24 n=2 Tax=Mycena TaxID=41247 RepID=A0A8H7D1K3_9AGAR)

HSP 1 Score: 78.6 bits (192), Expect = 6.870e-16
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 0
Query:    2 ALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVP 93
            AL++VTG ++KSTEIM     L+K+P++ + M +++ EM +AG++EE+V D L L + E L+ +ADAEVDKV+AE+T+G L  A  A T +P
Sbjct:   97 ALVKVTGTLQKSTEIMKLSNSLIKLPQISQTMREMSMEMTKAGIMEEMVGDVLDLDEDEELEEEADAEVDKVLAELTDGKLGLAGSAGTDLP 188          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A177WH41_BATDL (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WH41_BATDL)

HSP 1 Score: 75.5 bits (184), Expect = 1.060e-14
Identity = 39/81 (48.15%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    2 ALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVL 82
            AL++VTG ++KS E+M  +  LVK+P++  +M +++ EM +AG++EE+V+D L + D EG++ +AD EVDKVI EIT G+L
Sbjct:   99 ALVKVTGALQKSGEVMKIVNSLVKLPQISASMQEMSMEMMKAGIIEEMVSDTLEMDD-EGIEEEADEEVDKVITEITSGLL 178          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A166VRT7_9AGAM (Snf7-domain-containing protein n=2 Tax=Atheliaceae TaxID=80628 RepID=A0A166VRT7_9AGAM)

HSP 1 Score: 75.5 bits (184), Expect = 1.100e-14
Identity = 39/93 (41.94%), Postives = 67/93 (72.04%), Query Frame = 0
Query:    2 ALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 94
            A+++VTG ++KSTEIM    +LVK+P++ + M +++ EM +AG++EE++ D L + + E ++ +AD EVDKV+AE+T+G L  A    T +P+
Sbjct:   97 AMVKVTGALQKSTEIMKLSNELVKLPQISQAMREMSMEMTKAGIMEEMMDDALDMNEDEEIEEEADGEVDKVLAELTDGKLGQAGAVGTGIPQ 189          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A812WPM4_SYMMI (Chmp3 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WPM4_SYMMI)

HSP 1 Score: 72.4 bits (176), Expect = 2.600e-14
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    3 LIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVP 93
            +I+V G I+ S E+M S+ +L+ + E++  M  +A EM RAGL+EE + D     + EGL+ +A+AEVD+V+ EIT G+L  A  APT  P
Sbjct:    1 MIKVQGCIQSSVEVMQSMNELLNMSEVRHIMNDMAREMARAGLIEETINDAFESVEPEGLEGEAEAEVDRVMEEITAGILAPAGTAPTVAP 91          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: E4YAG4_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4YAG4_OIKDI)

HSP 1 Score: 74.3 bits (181), Expect = 2.830e-14
Identity = 40/93 (43.01%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    1 SALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVP 93
            +A IR+TG I+KST++M S+  LVK+PELQ+ M  ++ EM + G+++E++ D +   D E ++ + DA+V+KV+ EIT+G L     A T+VP
Sbjct:   94 AATIRMTGAIEKSTQVMQSMSKLVKLPELQKTMTAMSKEMMKMGIIDELMDDAMESLDPEDMEEEVDAQVEKVLHEITKGELGSLPSAGTSVP 186          
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Match: A0A1Y1VJ74_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VJ74_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 4.380e-14
Identity = 35/81 (43.21%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    4 IRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLALTDAEGLDAQADAEVDKVIAEITEGVLEG 84
            I++TG +K +T IM S+  LVK+PE+ + M + ++EM +AG++EE+++D L + D EG++ +A+ EV+KV+ E+T G  EG
Sbjct:   83 IKITGALKDTTAIMQSMNALVKVPEISKTMQEFSSEMTKAGIIEEMISDTLEMNDEEGIEEEAEEEVEKVLFELTNGKKEG 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19449.6248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7G8_ECTSI5.890e-4997.85Similar to vacuolar protein sorting 24 homolog n=2... [more]
A0A2R5GMG8_9STRA9.390e-1848.42Charged multivesicular body protein 3 n=1 Tax=Hond... [more]
A0A8J2S9J1_9STRA2.470e-1642.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZDQ5_9STRA5.930e-1650.54Vacuolar protein-like protein sorting 24 (Fragment... [more]
A0A8H7D1K3_9AGAR6.870e-1647.83Vacuolar sorting protein VPS24 n=2 Tax=Mycena TaxI... [more]
A0A177WH41_BATDL1.060e-1448.15Uncharacterized protein n=2 Tax=Batrachochytrium d... [more]
A0A166VRT7_9AGAM1.100e-1441.94Snf7-domain-containing protein n=2 Tax=Atheliaceae... [more]
A0A812WPM4_SYMMI2.600e-1443.96Chmp3 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
E4YAG4_OIKDI2.830e-1443.01Uncharacterized protein n=2 Tax=Oikopleura dioica ... [more]
A0A1Y1VJ74_9FUNG4.380e-1443.21Uncharacterized protein (Fragment) n=1 Tax=Piromyc... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 6..90
e-value: 1.4E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 2..84
NoneNo IPR availablePANTHERPTHR10476:SF1CHARGED MULTIVESICULAR BODY PROTEIN 3coord: 2..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19449contigEcto-sp13_S_contig19449:88..1382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19449.6248.1mRNA_Ecto-sp13_S_contig19449.6248.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19449 88..1382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19449.6248.1 ID=prot_Ecto-sp13_S_contig19449.6248.1|Name=mRNA_Ecto-sp13_S_contig19449.6248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
SALIRVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVV
ADGLALTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam