prot_Ecto-sp13_S_contig19446.6247.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19446.6247.1
Unique Nameprot_Ecto-sp13_S_contig19446.6247.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length186
Homology
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: D8LUA3_ECTSI (Serine hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUA3_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 3.080e-126
Identity = 183/186 (98.39%), Postives = 186/186 (100.00%), Query Frame = 0
Query:    1 QVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            +VRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPE+WGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSF+ETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL
Sbjct:   44 KVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPELWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFYETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 229          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: A0A835YWD3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD3_9STRA)

HSP 1 Score: 331 bits (848), Expect = 1.210e-109
Identity = 160/184 (86.96%), Postives = 173/184 (94.02%), Query Frame = 0
Query:    3 RQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            RQRDSLVLIASENFTSK+V+DALGS+MSNKYSEGYPGARYYGGNE IDKVES+CQ RAL+AF LDP  WGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVS +FETFPYRL+E+TG IDYD +  NAKLFRPKLIVAGASAYSR IDYARM+++ADASGA+LL
Sbjct:   55 RQRDSLVLIASENFTSKAVFDALGSVMSNKYSEGYPGARYYGGNENIDKVESMCQSRALQAFGLDPAKWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSLYFETFPYRLNETTGTIDYDKLEENAKLFRPKLIVAGASAYSRCIDYARMRKIADASGAYLL 238          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: A0A7S3M9R5_9STRA (Serine hydroxymethyltransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9R5_9STRA)

HSP 1 Score: 325 bits (832), Expect = 2.150e-107
Identity = 158/186 (84.95%), Postives = 172/186 (92.47%), Query Frame = 0
Query:    1 QVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            ++RQRDSLVLIASENFTSKSV+DALGS+MSNKYSEGYPGARYYGGNEQIDK E LCQKRALEAF+LDPE WGVNVQ+LSGSPANFQAY AVL PHDRIM+LDLPHGGHLSHGYQTDTKKIS VS FFETFPYRL+E+TG IDYD M  NAKL+RPKLIVAGASAY+R IDY RM++VAD SGA+LL
Sbjct:   47 KIRQRDSLVLIASENFTSKSVFDALGSVMSNKYSEGYPGARYYGGNEQIDKAELLCQKRALEAFNLDPEKWGVNVQSLSGSPANFQAYAAVLAPHDRIMALDLPHGGHLSHGYQTDTKKISAVSVFFETFPYRLNETTGVIDYDKMEENAKLYRPKLIVAGASAYARLIDYERMRKVADNSGAFLL 232          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: W7TN09_9STRA (Serine hydroxymethyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN09_9STRA)

HSP 1 Score: 319 bits (817), Expect = 4.870e-105
Identity = 154/186 (82.80%), Postives = 169/186 (90.86%), Query Frame = 0
Query:    1 QVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            +VRQR+SLVLIASENFTSKSV+DALGS+MSNKYSEGYPGARYYGGNE IDKVESLCQ+RAL AF+LDP  WGVNVQTLSGSPANFQAYTAVL PHDRIM+LDLPHGGHLSHGYQTD+KKIS VS FFETFPYRLDE TG+IDYD M  NA LFRPKL+VAGASAY+R IDY RM+++AD   A+LL
Sbjct:   56 KVRQRESLVLIASENFTSKSVFDALGSVMSNKYSEGYPGARYYGGNENIDKVESLCQQRALAAFNLDPARWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDERTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLL 241          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: A0A7S2C4R3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4R3_9STRA)

HSP 1 Score: 312 bits (799), Expect = 6.490e-103
Identity = 148/183 (80.87%), Postives = 165/183 (90.16%), Query Frame = 0
Query:    4 QRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            QRDSL+LIASEN TSKSVYDALGS+MSNKYSEGYPGARYYGGNEQIDKVE++CQ RALEAF+LDPE WGVNVQ+LSGSPANFQ +TAVL+PH RIM LDLPHGGHLSHGYQT TKKIS VS +FE  PYRLDESTG IDYDT+ ANA L+RP+L++AGASAYSR IDY RM+++AD  GAWLL
Sbjct:    1 QRDSLILIASENLTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDKVETMCQNRALEAFNLDPEKWGVNVQSLSGSPANFQVFTAVLEPHGRIMGLDLPHGGHLSHGYQTATKKISAVSVYFEQLPYRLDESTGVIDYDTLEANAGLYRPQLLIAGASAYSRLIDYERMRKIADQHGAWLL 183          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: A0A7S2B3N4_9STRA (Serine hydroxymethyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3N4_9STRA)

HSP 1 Score: 313 bits (802), Expect = 9.220e-103
Identity = 149/184 (80.98%), Postives = 167/184 (90.76%), Query Frame = 0
Query:    3 RQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            RQR+SLVLIASENFTSK+V+DALGS+MSNKYSEGYPGARYYGGNE ID+VE +CQKRALEAFDLDPE WGVNVQ+LSGSPANFQAY AVLQPHDRIM+LDLPHGGHLSHGYQT  KKIS VS F+ETFPYRL+E TG IDYD M A+AKL+RPKLIVAGASAYSR IDY+R++E+ D   A++L
Sbjct:   46 RQRNSLVLIASENFTSKAVFDALGSVMSNKYSEGYPGARYYGGNENIDQVEEICQKRALEAFDLDPEKWGVNVQSLSGSPANFQAYAAVLQPHDRIMALDLPHGGHLSHGYQTPNKKISAVSVFYETFPYRLNEETGSIDYDAMEASAKLYRPKLIVAGASAYSRLIDYSRIREICDEHNAYML 229          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: F0XZQ7_AURAN (Serine hydroxymethyltransferase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZQ7_AURAN)

HSP 1 Score: 310 bits (795), Expect = 2.950e-102
Identity = 147/186 (79.03%), Postives = 166/186 (89.25%), Query Frame = 0
Query:    1 QVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            +VRQRDSLVLIASENFTSKSV+DALGS+MSNKYSEGYP ARYYGGNE IDKVE +CQ RALE F+LDPE WGVNVQTLSGSPANFQ YTA+LQPH+R+M LDLPHGGHLSHG+QT TKKIS  S FFETFPYRLDESTG IDY+ +AANA L+RPK+I+AGASAYSR IDY  M+++ D +GA+LL
Sbjct:   20 KVRQRDSLVLIASENFTSKSVFDALGSVMSNKYSEGYPNARYYGGNEHIDKVEIMCQNRALECFNLDPEQWGVNVQTLSGSPANFQVYTALLQPHERVMGLDLPHGGHLSHGFQTPTKKISATSVFFETFPYRLDESTGLIDYEALAANAALYRPKMIIAGASAYSRLIDYDAMRKICDDNGAYLL 205          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: A0A482UVT5_9ARCH (Serine hydroxymethyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UVT5_9ARCH)

HSP 1 Score: 302 bits (774), Expect = 3.080e-102
Identity = 143/184 (77.72%), Postives = 162/184 (88.04%), Query Frame = 0
Query:    3 RQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            RQRDSLVLIASENF S++V DALGS+MSNKYSEGYPGARYYGGNE IDK E LCQ RAL+ F LDP +WGVNVQ+LSGSPANFQAY AVLQPHDRIM+LDLPHGGHLSHGYQTD KKIS VS FFETFPYRL+E +G IDYD +  NA+L+RPKLIVAGASAY+R IDY RM+++ D +G++LL
Sbjct:   32 RQRDSLVLIASENFASRAVMDALGSVMSNKYSEGYPGARYYGGNENIDKAEKLCQDRALQVFGLDPNLWGVNVQSLSGSPANFQAYAAVLQPHDRIMALDLPHGGHLSHGYQTDNKKISAVSVFFETFPYRLNEKSGLIDYDRLEENARLYRPKLIVAGASAYARLIDYERMRKICDINGSYLL 215          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: A0A7R9WF27_9STRA (Glycine hydroxymethyltransferase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WF27_9STRA)

HSP 1 Score: 303 bits (776), Expect = 2.440e-101
Identity = 146/183 (79.78%), Postives = 163/183 (89.07%), Query Frame = 0
Query:    1 QVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGA 183
            + RQR SLVLIASENFTSK+V DALGS++SNKYSEGYPGARYYGGNE ID+VE+LCQ+RALEAFDLDPE WGVNVQ+LSGSPANFQ YTA+L+ HDRI+SLDLPHGGHLSHGYQT TKKISMVS +FE+ PYRLDESTG IDYD M  +A LFRPKLIVAGASAYSR +DY R+K +AD  GA
Sbjct:  108 KARQRSSLVLIASENFTSKAVLDALGSVLSNKYSEGYPGARYYGGNENIDRVETLCQRRALEAFDLDPEEWGVNVQSLSGSPANFQVYTALLETHDRILSLDLPHGGHLSHGYQTPTKKISMVSRYFESMPYRLDESTGLIDYDAMENSANLFRPKLIVAGASAYSRLMDYERIKSIADNVGA 290          
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Match: A0A7S1DCC8_CYCTE (Serine hydroxymethyltransferase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCC8_CYCTE)

HSP 1 Score: 305 bits (782), Expect = 1.240e-99
Identity = 147/186 (79.03%), Postives = 167/186 (89.78%), Query Frame = 0
Query:    1 QVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL 186
            + RQR+SLVLIASENFTSK+V DALGS++SNKYSEGYPGARYYGGNE ID+VE LCQKRALEAF LDPE WGVNVQ+LSGSPANFQAYTA+L+PHDRI+SLDLPHGGHLSHGYQT TKKISMVS +FE+ PYRLDE TG IDYD M  +A+LFRPKLIVAGASAYSR IDY R++ +A+  GA++L
Sbjct:   47 KARQRNSLVLIASENFTSKAVLDALGSVLSNKYSEGYPGARYYGGNENIDQVEILCQKRALEAFKLDPEEWGVNVQSLSGSPANFQAYTALLEPHDRILSLDLPHGGHLSHGYQTPTKKISMVSRYFESMPYRLDEKTGTIDYDQMETSAELFRPKLIVAGASAYSRLIDYERIRNIANNVGAYVL 232          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19446.6247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUA3_ECTSI3.080e-12698.39Serine hydroxymethyltransferase n=2 Tax=Ectocarpus... [more]
A0A835YWD3_9STRA1.210e-10986.96Serine hydroxymethyltransferase n=1 Tax=Tribonema ... [more]
A0A7S3M9R5_9STRA2.150e-10784.95Serine hydroxymethyltransferase n=1 Tax=Spumella e... [more]
W7TN09_9STRA4.870e-10582.80Serine hydroxymethyltransferase n=3 Tax=Monodopsid... [more]
A0A7S2C4R3_9STRA6.490e-10380.87Serine hydroxymethyltransferase n=1 Tax=Florenciel... [more]
A0A7S2B3N4_9STRA9.220e-10380.98Serine hydroxymethyltransferase n=1 Tax=Dictyocha ... [more]
F0XZQ7_AURAN2.950e-10279.03Serine hydroxymethyltransferase (Fragment) n=1 Tax... [more]
A0A482UVT5_9ARCH3.080e-10277.72Serine hydroxymethyltransferase n=1 Tax=archaeon T... [more]
A0A7R9WF27_9STRA2.440e-10179.78Glycine hydroxymethyltransferase (Fragment) n=1 Ta... [more]
A0A7S1DCC8_CYCTE1.240e-9979.03Serine hydroxymethyltransferase n=1 Tax=Cyclophora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039429Serine hydroxymethyltransferase-like domainPFAMPF00464SHMTcoord: 2..186
e-value: 3.2E-91
score: 305.9
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 15..186
e-value: 1.0E-77
score: 262.7
IPR001085Serine hydroxymethyltransferasePANTHERPTHR11680SERINE HYDROXYMETHYLTRANSFERASEcoord: 2..186
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 3..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19446contigEcto-sp13_S_contig19446:429..3301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19446.6247.1mRNA_Ecto-sp13_S_contig19446.6247.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19446 429..3301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19446.6247.1 ID=prot_Ecto-sp13_S_contig19446.6247.1|Name=mRNA_Ecto-sp13_S_contig19446.6247.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
QVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQID
KVESLCQKRALEAFDLDPEMWGVNVQTLSGSPANFQAYTAVLQPHDRIMS
LDLPHGGHLSHGYQTDTKKISMVSSFFETFPYRLDESTGQIDYDTMAANA
KLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039429SHMT-like_dom
IPR015421PyrdxlP-dep_Trfase_major
IPR001085Ser_HO-MeTrfase
IPR015424PyrdxlP-dep_Trfase