prot_Ecto-sp13_S_contig19431.6241.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19431.6241.1
Unique Nameprot_Ecto-sp13_S_contig19431.6241.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A6H5L6R6_9PHAE (Peroxin-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R6_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 8.880e-41
Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 0
Query:    1 MYFWLNSSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTG 84
            MY WL+SSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQV    TG
Sbjct:    1 MYVWLDSSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVCVAYTG 84          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: D7FVI2_ECTSI (Peroxin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI2_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 4.110e-35
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0
Query:    6 NSSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTG 84
            ++ SGAIEVPLALAQV+GLAAALD+D+YLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQV    TG
Sbjct:   66 DAQSGAIEVPLALAQVLGLAAALDADSYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVCVAYTG 144          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A0D2LQD4_9CHLO (Peroxin-1 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LQD4_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 8.950e-8
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0
Query:    8 SSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTGG 85
            S GA+ VP ALA  +GL           V   P   VP A  V +EPLS DDWE+LE NA HLE  +L QV G+V  G
Sbjct:   71 SEGALGVPAALANCLGLRRGAP------VQLRPLAGVPAAEAVIVEPLSGDDWEVLELNAGHLEDQLLEQV-GVVAPG 141          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A5J4YGC6_9CHLO (Peroxin-1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGC6_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 4.000e-7
Identity = 31/74 (41.89%), Postives = 47/74 (63.51%), Query Frame = 0
Query:   12 IEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTGG 85
            +E+P ALA  +G+A  +      +V+ +    +P A  VC+EPLS DDWE++E NA H+E  +L+QV G+V  G
Sbjct:   85 LEIPAALAGCLGIAQGI------TVSVQVVTDIPEAIGVCVEPLSVDDWEVVEQNAGHMEEQILSQV-GVVQAG 151          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A7S2SM78_9STRA (Peroxin-1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SM78_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.580e-6
Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   12 IEVPLALAQVMGLAAALD--------SDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQV 78
            ++VP+ALA+ +GL  A+D        S   +SVA  P  Y P ASRV ++P++ DDWEIL+ +A  +E  +L+Q+
Sbjct:   83 LQVPVALAESIGLKDAVDFATKTAPDSPLVVSVAVIP--YAPVASRVDVDPVTADDWEILQLHANFVESELLSQI 155          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A2V0PIJ4_9CHLO (Peroxin-1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PIJ4_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 4.910e-6
Identity = 30/71 (42.25%), Postives = 39/71 (54.93%), Query Frame = 0
Query:   14 VPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTG 84
            VP  LA  +GL          +V   P G VP A  V +EPL+ DDWE+++ NAEHLE  +L QV  +  G
Sbjct:   88 VPALLAACLGLRHGA------AVRLRPLGRVPVAEAVSVEPLTGDDWEVVDLNAEHLEERLLEQVGAVAVG 152          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A7K7Z3U3_THRLU (Peroxin-1 (Fragment) n=1 Tax=Thryothorus ludovicianus TaxID=74200 RepID=A0A7K7Z3U3_THRLU)

HSP 1 Score: 52.0 bits (123), Expect = 9.170e-6
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   39 EPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTG 84
            EP  +V +  +V +EPL+ DDWEILE +A  LEGH+L Q+R +  G
Sbjct:   92 EPCSHVSSCQQVEVEPLTADDWEILELHASSLEGHLLDQIRVVFPG 137          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: UPI001ABE27EF (peroxisome biogenesis factor 1 isoform X1 n=8 Tax=Bufo TaxID=8383 RepID=UPI001ABE27EF)

HSP 1 Score: 51.6 bits (122), Expect = 1.250e-5
Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    6 NSSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVR 79
            N+   A+E+   +A+ +GL   +D      V  +P   VP+   V +EPLS DDWEILE +A  LE H+L Q+R
Sbjct:   65 NADYTAVELSRQMAEKLGL---VDGQ---QVILKPCSMVPSCKEVTVEPLSADDWEILELHAAALEMHLLDQIR 132          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A6P4ZQM7_BRABE (Peroxin-1 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZQM7_BRABE)

HSP 1 Score: 51.2 bits (121), Expect = 1.710e-5
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   44 VPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTG 84
            VPT +R+ +EP++ DDWEILE +A ++E H+L QVR + TG
Sbjct:  100 VPTCTRLHVEPVTVDDWEILELHASYIESHLLDQVRVVWTG 140          
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Match: A0A8K0A2G9_BRALA (PEX1 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A2G9_BRALA)

HSP 1 Score: 50.8 bits (120), Expect = 2.340e-5
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   44 VPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTG 84
            VP+ +R+ +EP+S DDWEILE +A ++E H+L QVR + TG
Sbjct:  101 VPSCTRLHVEPVSVDDWEILELHASYIESHLLDQVRVVWTG 141          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19431.6241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6R6_9PHAE8.880e-4192.86Peroxin-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxI... [more]
D7FVI2_ECTSI4.110e-3587.34Peroxin-1 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A0D2LQD4_9CHLO8.950e-847.44Peroxin-1 n=1 Tax=Monoraphidium neglectum TaxID=14... [more]
A0A5J4YGC6_9CHLO4.000e-741.89Peroxin-1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996... [more]
A0A7S2SM78_9STRA3.580e-641.33Peroxin-1 n=1 Tax=labyrinthulid quahog parasite QP... [more]
A0A2V0PIJ4_9CHLO4.910e-642.25Peroxin-1 n=1 Tax=Raphidocelis subcapitata TaxID=3... [more]
A0A7K7Z3U3_THRLU9.170e-650.00Peroxin-1 (Fragment) n=1 Tax=Thryothorus ludovicia... [more]
UPI001ABE27EF1.250e-540.54peroxisome biogenesis factor 1 isoform X1 n=8 Tax=... [more]
A0A6P4ZQM7_BRABE1.710e-553.66Peroxin-1 n=1 Tax=Branchiostoma belcheri TaxID=774... [more]
A0A8K0A2G9_BRALA2.340e-553.66PEX1 protein n=2 Tax=Branchiostoma lanceolatum Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.330.10coord: 44..85
e-value: 1.3E-12
score: 49.7
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.47
IPR015342Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel foldPFAMPF09262PEX-1Ncoord: 49..82
e-value: 1.1E-10
score: 41.7
IPR029067CDC48 domain 2-like superfamilySUPERFAMILY54585Cdc48 domain 2-likecoord: 45..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19431contigEcto-sp13_S_contig19431:2915..3169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19431.6241.1mRNA_Ecto-sp13_S_contig19431.6241.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19431 2915..3169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19431.6241.1 ID=prot_Ecto-sp13_S_contig19431.6241.1|Name=mRNA_Ecto-sp13_S_contig19431.6241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MYFWLNSSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRV
CLEPLSCDDWEILEANAEHLEGHMLTQVRGIVTGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015342PEX-N_psi_beta-barrel
IPR029067CDC48_domain_2-like_sf