prot_Ecto-sp13_S_contig194.6223.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig194.6223.1
Unique Nameprot_Ecto-sp13_S_contig194.6223.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A6H5K330_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K330_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 7.730e-75
Identity = 159/181 (87.85%), Postives = 163/181 (90.06%), Query Frame = 0
Query:    3 SKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALKLKQKVLKSARAAAAASGGTSMDMELLGGEEMSSETGSGGTGSGSG--VTAEGFDDGSEEAEDAMVEXXXXXXXXXXXXXXXXXXXXANARRGVSPKEPLKRVRRHSIAY 181
            S+YADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLR+KGRFVKMSPEQR ALKLKQKVLKSARAAAAASG TSMDMELLGGEEMSSETGS          VTAEGFD+GSEEAEDAMVEXXXXXXXXXXXXXX      A+ARRGVSPKEPLKRVRRHSIAY
Sbjct:  509 SEYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRTALKLKQKVLKSARAAAAASGATSMDMELLGGEEMSSETGSXXXXXXXXXXVTAEGFDEGSEEAEDAMVEXXXXXXXXXXXXXX------AHARRGVSPKEPLKRVRRHSIAY 683          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: D8LD77_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD77_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 4.860e-44
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0
Query:    3 SKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALKLKQKVLKSARAAAAASGGT 93
            ++YADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLR+KGRFVKMSPEQRAALKLKQK LKSARAAA ASG T
Sbjct:  379 TRYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKALKSARAAAVASGAT 469          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A835ZBX8_9STRA (CCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.650e-30
Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    1 MLSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALKLKQ 77
            +LSKY D+YN+NGRIGIYT QEREAIIARFK KR RRVW+KKIRYNCRKNLADKRLRIKGRFVKM+P QRAAL+L++
Sbjct:  287 LLSKYTDVYNRNGRIGIYTAQEREAIIARFKAKRLRRVWRKKIRYNCRKNLADKRLRIKGRFVKMTPAQRAALQLQR 363          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A835Z588_9STRA (CCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z588_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.790e-29
Identity = 60/75 (80.00%), Postives = 70/75 (93.33%), Query Frame = 0
Query:    1 MLSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALKL 75
            +L KYAD+YN++GRIGIYT QEREAIIAR++ KR RRVW+KKIRYNCRKNLADKRLR+KGRFVKM+P QRAAL+L
Sbjct:  277 LLHKYADVYNRSGRIGIYTLQEREAIIARYRAKRARRVWRKKIRYNCRKNLADKRLRVKGRFVKMTPAQRAALQL 351          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: K8YW04_NANGC (CCT domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YW04_NANGC)

HSP 1 Score: 113 bits (282), Expect = 5.980e-26
Identity = 53/69 (76.81%), Postives = 65/69 (94.20%), Query Frame = 0
Query:    1 MLSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQ 69
            ML+KY+D+YNK+GRIGIYTR ER+AIIARF+ KR RRVWKKKIRY+CRKNLADKR+R+KGRFVK+ P++
Sbjct:  444 MLAKYSDVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRVRVKGRFVKLPPKE 512          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A4D9CLM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLM4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.020e-25
Identity = 53/69 (76.81%), Postives = 65/69 (94.20%), Query Frame = 0
Query:    1 MLSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQ 69
            ML+KY+D+YNK+GRIGIYTR ER+AIIARF+ KR RRVWKKKIRY+CRKNLADKR+R+KGRFVK+ P++
Sbjct:  802 MLAKYSDVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRVRVKGRFVKLPPKE 870          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A7S1Z2T2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2T2_TRICV)

HSP 1 Score: 108 bits (270), Expect = 2.110e-25
Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    2 LSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALK 74
            LSKY ++YNKNGRIGIYT  ER AIIA+F  KR RRVW KKIRYNCRKNLAD+R+R+KGRFVK S EQ A LK
Sbjct:  219 LSKYKEVYNKNGRIGIYTPAERAAIIAKFNSKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAQLK 291          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A6S9FZK2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FZK2_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.010e-25
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    2 LSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALKLKQK 78
            LSKY ++YNKNGRIG+YT  ER AIIA+F  KR RRVW KKIRYNCRKNLAD+R+R+KGRFVK S EQ AAL  +QK
Sbjct:  285 LSKYKEIYNKNGRIGVYTPAERAAIIAKFNGKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAALAAQQK 361          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A7S2YJJ2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJJ2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.460e-24
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    2 LSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALKLKQKVLK 81
            L KY ++YN+NGRIGIYT  ER AIIARF +KR RRVW KKIRY CRKNLAD+RLR+KGRFVK S ++  A +L+ +V K
Sbjct:   43 LGKYKEVYNRNGRIGIYTPSERAAIIARFNKKRQRRVWNKKIRYGCRKNLADRRLRVKGRFVKRSEQELLAKELQARVEK 122          
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Match: A0A7S2MN31_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MN31_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.800e-24
Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    2 LSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRIKGRFVKMSPEQRAALKLKQK 78
            L KY ++YN+NGRIG+YT  ER AIIA+F  KR RRVW KKIRYNCRKNLAD+R+R+KGRFVK S EQ AA+K  +K
Sbjct:  281 LEKYKEIYNRNGRIGVYTPAERAAIIAKFNGKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAAVKAVKK 357          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig194.6223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K330_9PHAE7.730e-7587.85CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LD77_ECTSI4.860e-4493.41CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZBX8_9STRA1.650e-3083.12CCT domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z588_9STRA1.790e-2980.00CCT domain-containing protein n=1 Tax=Tribonema mi... [more]
K8YW04_NANGC5.980e-2676.81CCT domain-containing protein (Fragment) n=2 Tax=N... [more]
A0A4D9CLM4_9STRA1.020e-2576.81Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1Z2T2_TRICV2.110e-2575.34Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A6S9FZK2_9STRA3.010e-2572.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2YJJ2_9STRA1.460e-2466.25Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2MN31_9STRA9.800e-2468.83Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..164
NoneNo IPR availablePANTHERPTHR31874:SF1ZINC FINGER PROTEIN CONSTANS-LIKE 6-RELATEDcoord: 19..66
NoneNo IPR availablePANTHERPTHR31874FAMILY NOT NAMEDcoord: 19..66
IPR010402CCT domainPFAMPF06203CCTcoord: 23..65
e-value: 9.4E-17
score: 60.8
IPR010402CCT domainPROSITEPS51017CCTcoord: 23..65
score: 13.523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig194contigEcto-sp13_S_contig194:28219..30008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig194.6223.1mRNA_Ecto-sp13_S_contig194.6223.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig194 28196..30008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig194.6223.1 ID=prot_Ecto-sp13_S_contig194.6223.1|Name=mRNA_Ecto-sp13_S_contig194.6223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MLSKYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKN
LADKRLRIKGRFVKMSPEQRAALKLKQKVLKSARAAAAASGGTSMDMELL
GGEEMSSETGSGGTGSGSGVTAEGFDDGSEEAEDAMVEEEEEEEEEEEEE
EEEEEEEEANARRGVSPKEPLKRVRRHSIAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain