prot_Ecto-sp13_S_contig194.6220.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig194.6220.1
Unique Nameprot_Ecto-sp13_S_contig194.6220.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
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BLAST of mRNA_Ecto-sp13_S_contig194.6220.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.130e-11
Identity = 39/46 (84.78%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:    1 MRDPVPFSVAVAAATALPAGKKIAHSLGKLNAVEERKFKRQRLAGS 46
            MRDPV FS AVAAA ALPAGK    SLGKLNAVEERKFKRQRLAGS
Sbjct:   82 MRDPVLFSAAVAAAAALPAGK----SLGKLNAVEERKFKRQRLAGS 123
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BLAST of mRNA_Ecto-sp13_S_contig194.6220.1 vs. uniprot
Match: A0A6H5JMU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMU9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.320e-10
Identity = 38/46 (82.61%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:    1 MRDPVPFSVAVAAATALPAGKKIAHSLGKLNAVEERKFKRQRLAGS 46
            MRDPVP S AVAAATALPAGK     LGKLNAVEER FKRQRLAGS
Sbjct:   82 MRDPVPSSAAVAAATALPAGKSQI-GLGKLNAVEERNFKRQRLAGS 126
[Close]
BLAST of mRNA_Ecto-sp13_S_contig194.6220.1 vs. uniprot
Match: A0A6H5JUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI4_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 6.980e-7
Identity = 39/81 (48.15%), Postives = 40/81 (49.38%), Query Frame = 0 
Query:    1 MRDPVPFSVAVAAATALPAGK-----------------------------------KIAHSLGKLNAVEERKFKRQRLAGS 46
            MRDPVP S AV AATALPAGK                                   K  +SLGKLNAVEER FKRQRLAGS
Sbjct:   65 MRDPVPSSAAVVAATALPAGKSLHARVDAFQAREAFGGPGLEQEGXLDPKSQFHTGKSRNSLGKLNAVEERNFKRQRLAGS 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig194.6220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K2T4_9PHAE3.130e-1184.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMU9_9PHAE1.320e-1082.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUI4_9PHAE6.980e-748.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig194contigEcto-sp13_S_contig194:2568..3965 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig194.6220.1mRNA_Ecto-sp13_S_contig194.6220.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig194 2568..3965 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig194.6220.1 ID=prot_Ecto-sp13_S_contig194.6220.1|Name=mRNA_Ecto-sp13_S_contig194.6220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
MRDPVPFSVAVAAATALPAGKKIAHSLGKLNAVEERKFKRQRLAGS
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