prot_Ecto-sp13_S_contig1929.6183.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1929.6183.1
Unique Nameprot_Ecto-sp13_S_contig1929.6183.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length553
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1929.6183.1 vs. uniprot
Match: D8LAT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAT0_ECTSI)

HSP 1 Score: 841 bits (2173), Expect = 2.510e-304
Identity = 478/554 (86.28%), Postives = 484/554 (87.36%), Query Frame = 0 
Query:    1 MPPEPELAHPSFSRRASNTSAASSSSXXXXXEKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEMQTRRSGSSRSFHHKRTASRGSNHDLITPTSHGRPGLGASQDSACGSPFRSSTSSRTAGSGRRSSNGGHHGVGVDAAEPSERRXXXXXXXXMGQGEGQSIVAAAMANFGDGVGATPGAIPEEGRDLSRSFQGSYSADPGDNTADAEAGVGRPAPAAAEGGGEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPNPSPTSLSGQPGAHAEGVAPKRSPVSKLLKDVFPNDEGGRSTPAAVRQLQVEVQRLRQRNAQAHSKEEKYKSDIAHLKRLMAVMESQVA--DQDLGSANTFRSRSARQMSTVGGAHSQDGETKPLVARVAELEEKLVVCSMENATAKQEHLTSQLASQKLEKTLQKLRHELAKSRAMNDLLQNEIDRLQGHEPEGEADGSGWRRWLGGVQEPLSPEPNPIQVTGGSDSPVVVVRDLDNNQLVYAPGRSQFG 552
            MPPEPELAHPSFSRRASNTSAASSS XXXXXEKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEMQT                                    SQDSACGSPFRSSTSSRTAGSGRRSS GGHHGVGVD AEPSERR        M QGEGQSIVAAAMANFG GV A PGAIPEEGR LSRSFQGS SADPGD++A AEA VGRPA      GGEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPNPSPTSL+GQ GAHAEGV PKRSPVSKLLKDVFPNDEGGRSTPAAVRQLQVEVQRLRQRNAQAHSKEEKYKS+IAHLKRLMAVMESQVA  D DL SAN+ RSRSARQMST GGAHSQDG TKPLVARVAELEEKLVVCSMENATAKQEHLTSQLASQKLEKTLQKLRHELAKSRAMNDLLQNEIDRLQGH+PEGEADGSGWRRWLGGVQEPLSPEPNPIQVTGGSDSPVVVVRDLDNNQLVYAPGRSQFG
Sbjct:    1 MPPEPELAHPSFSRRASNTSAASSSXXXXXXEKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEMQT------------------------------------SQDSACGSPFRSSTSSRTAGSGRRSSTGGHHGVGVDTAEPSERRRRRHRKSSMAQGEGQSIVAAAMANFGGGVDANPGAIPEEGRVLSRSFQGSDSADPGDDSAAAEAAVGRPAXXXXXXGGEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPNPSPTSLNGQSGAHAEGVTPKRSPVSKLLKDVFPNDEGGRSTPAAVRQLQVEVQRLRQRNAQAHSKEEKYKSEIAHLKRLMAVMESQVANADPDLASANSSRSRSARQMSTAGGAHSQDGATKPLVARVAELEEKLVVCSMENATAKQEHLTSQLASQKLEKTLQKLRHELAKSRAMNDLLQNEIDRLQGHDPEGEADGSGWRRWLGGVQEPLSPEPNPIQVTGGSDSPVVVVRDLDNNQLVYAPGRSQFG 518
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1929.6183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAT0_ECTSI2.510e-30486.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableCOILSCoilCoilcoord: 349..376
NoneNo IPR availableCOILSCoilCoilcoord: 430..492
NoneNo IPR availableCOILSCoilCoilcoord: 268..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1929contigEcto-sp13_S_contig1929:4210..11963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1929.6183.1mRNA_Ecto-sp13_S_contig1929.6183.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1929 3126..13845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1929.6183.1 ID=prot_Ecto-sp13_S_contig1929.6183.1|Name=mRNA_Ecto-sp13_S_contig1929.6183.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=553bp
MPPEPELAHPSFSRRASNTSAASSSSRTSSAEKAHAKSLRNAGKEAFLTV
VRETVQELGLDAANEAIEEEAIRMEEMQTRRSGSSRSFHHKRTASRGSNH
DLITPTSHGRPGLGASQDSACGSPFRSSTSSRTAGSGRRSSNGGHHGVGV
DAAEPSERRRRRHRKSSMGQGEGQSIVAAAMANFGDGVGATPGAIPEEGR
DLSRSFQGSYSADPGDNTADAEAGVGRPAPAAAEGGGEATSFRNTAETME
DDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQ
AMPNPSPTSLSGQPGAHAEGVAPKRSPVSKLLKDVFPNDEGGRSTPAAVR
QLQVEVQRLRQRNAQAHSKEEKYKSDIAHLKRLMAVMESQVADQDLGSAN
TFRSRSARQMSTVGGAHSQDGETKPLVARVAELEEKLVVCSMENATAKQE
HLTSQLASQKLEKTLQKLRHELAKSRAMNDLLQNEIDRLQGHEPEGEADG
SGWRRWLGGVQEPLSPEPNPIQVTGGSDSPVVVVRDLDNNQLVYAPGRSQ
FG*
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