prot_Ecto-sp13_S_contig19227.6150.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19227.6150.1
Unique Nameprot_Ecto-sp13_S_contig19227.6150.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length166
Homology
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: D7FSU9_ECTSI (Glyceraldehyde-3-phosphate dehydrogenase n=4 Tax=Phaeophyceae TaxID=2870 RepID=D7FSU9_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.130e-78
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAKAGVKA 165
            SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAKAGVKA
Sbjct:  265 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAKAGVKA 385          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A0A6YYV3_DICDH (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=A0A0A6YYV3_DICDH)

HSP 1 Score: 223 bits (568), Expect = 3.350e-69
Identity = 105/121 (86.78%), Postives = 114/121 (94.21%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAKAGVKA 165
            +L+GKLTGMAFRVPTPNVSVVDLTCTL+K T+YEEIC AIK+A+ESGPMKG++GYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVK VAWYDNEWGYSQRVMDLM HMA VD K+GV A
Sbjct:  263 ALKGKLTGMAFRVPTPNVSVVDLTCTLEKGTTYEEICGAIKDAAESGPMKGIVGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKVVAWYDNEWGYSQRVMDLMCHMAAVDVKSGVTA 383          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A835ZBB7_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB7_9STRA)

HSP 1 Score: 207 bits (526), Expect = 6.750e-63
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAKAGV 163
            SL+GKLTGMAFRVPTPNVSVVDLTCTL+K+TS+EEICAAIK ASE GPMKGV+GY +EPLVSTDFI+D RSSIFDAGAGIMLNPNFVK VAWYDNEWGYSQRV+DLM +MA  D KAGV
Sbjct:  263 SLKGKLTGMAFRVPTPNVSVVDLTCTLEKSTSFEEICAAIKAASE-GPMKGVLGYCDEPLVSTDFITDPRSSIFDAGAGIMLNPNFVKVVAWYDNEWGYSQRVLDLMSYMAKADKKAGV 380          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A7S1TP60_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP60_9STRA)

HSP 1 Score: 187 bits (476), Expect = 6.470e-58
Identity = 90/115 (78.26%), Postives = 100/115 (86.96%), Query Frame = 0
Query:   46 LQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAK 160
            + GKLTGMAFRVPTP+VSVVDLTC L+K+T+YE+ICA IK  SE G MKG +GY + PLVS DF+SD RSSIFDAGAGIMLNPNFVK VAWYDNEWGYS RVMDLMVHMA +DAK
Sbjct:   64 VNGKLTGMAFRVPTPDVSVVDLTCKLEKSTTYEDICAVIKAKSE-GDMKGFMGYEDTPLVSQDFVSDPRSSIFDAGAGIMLNPNFVKLVAWYDNEWGYSNRVMDLMVHMAKIDAK 177          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A7S4P185_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P185_GUITH)

HSP 1 Score: 182 bits (463), Expect = 2.500e-56
Identity = 93/116 (80.17%), Postives = 100/116 (86.21%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAK 160
            SLQGKLTGMAFRVPT +VSVVDLTC L KAT+YEEICA IK  SE G MKG +GY +EPLVSTDF SD RSSIFDAGAGIMLNPNFVK VAWYDNEWGYS RV+DLM  +A+VDAK
Sbjct:   35 SLQGKLTGMAFRVPTIDVSVVDLTCKLGKATTYEEICAMIKAKSE-GEMKGFLGYCDEPLVSTDFESDPRSSIFDAGAGIMLNPNFVKLVAWYDNEWGYSCRVVDLMKTVASVDAK 149          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A7S2HWW7_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HWW7_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.950e-56
Identity = 95/116 (81.90%), Postives = 102/116 (87.93%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAK 160
            SLQGKLTGMAFRVPT +VSVVDLTC L+KAT+YEEICA IK  SE G MKGV+GY +EPLVSTDF SDSRSSIFDA AGIMLNPNFVK VAWYDNEWGYS RV+DLM H+A VDAK
Sbjct:  262 SLQGKLTGMAFRVPTIDVSVVDLTCRLEKATTYEEICAVIKAKSE-GEMKGVLGYCDEPLVSTDFESDSRSSIFDADAGIMLNPNFVKLVAWYDNEWGYSGRVVDLMKHVAAVDAK 376          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A7R9TZC8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TZC8_9VIRI)

HSP 1 Score: 182 bits (461), Expect = 5.190e-56
Identity = 93/117 (79.49%), Postives = 100/117 (85.47%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAKA 161
            SLQGKLTGMAFRVPT +VSVVDLTC L+K T+YEEICA IK  SE G MKGV+GY +EPLVSTDF SDSRSSIFDA AGIMLNP+FVK VAWYDNEWGYS RV+DLM   A VDAKA
Sbjct:   36 SLQGKLTGMAFRVPTIDVSVVDLTCKLEKETTYEEICAHIKALSE-GKMKGVLGYCDEPLVSTDFESDSRSSIFDAQAGIMLNPSFVKLVAWYDNEWGYSSRVVDLMKMCAAVDAKA 151          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: B8BQU2_THAPS (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=8 Tax=Eukaryota TaxID=2759 RepID=B8BQU2_THAPS)

HSP 1 Score: 188 bits (477), Expect = 1.260e-55
Identity = 94/116 (81.03%), Postives = 101/116 (87.07%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAK 160
            SLQGKLTGMAFRVPT +VSVVDLTC L KAT+YEEICA IK  SE G MKG++GY +EPLVSTDF SDSRSSIFDAGAGIMLNP FVK VAWYDNEWGYS RV+DLM H+A VDAK
Sbjct:  258 SLQGKLTGMAFRVPTIDVSVVDLTCKLGKATTYEEICAVIKAKSE-GEMKGILGYCDEPLVSTDFESDSRSSIFDAGAGIMLNPTFVKLVAWYDNEWGYSGRVVDLMKHVAAVDAK 372          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A7S3EJH1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJH1_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 3.770e-55
Identity = 93/116 (80.17%), Postives = 100/116 (86.21%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAK 160
            SLQGKLTGMAFRVPT +VSVVDLTC L KAT+YEEICA IK  SE G MKG +GY +EPLVSTDF SD RSSIFDAGAGIMLNPNFVK VAWYDNEWGYS RV+DLM  +A+VDAK
Sbjct:  122 SLQGKLTGMAFRVPTIDVSVVDLTCKLGKATTYEEICAMIKAKSE-GEMKGFLGYCDEPLVSTDFESDPRSSIFDAGAGIMLNPNFVKLVAWYDNEWGYSCRVVDLMKTVASVDAK 236          
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Match: A0A7S2RX48_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RX48_9STRA)

HSP 1 Score: 186 bits (473), Expect = 8.180e-55
Identity = 92/116 (79.31%), Postives = 102/116 (87.93%), Query Frame = 0
Query:   45 SLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVDAK 160
            +LQGKLTGMAFRVPT +VSVVDLTC L+KAT+YEEICA +K  SE G MKG++GY +EPLVSTDF SDSRSSIFDA AGIMLNPNFVK VAWYDNEWGYS RV+DLM H+A VDAK
Sbjct:  278 ALQGKLTGMAFRVPTIDVSVVDLTCKLEKATTYEEICAHVKAQSE-GDMKGILGYCDEPLVSTDFESDSRSSIFDANAGIMLNPNFVKLVAWYDNEWGYSCRVVDLMKHVAAVDAK 392          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19227.6150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSU9_ECTSI1.130e-78100.00Glyceraldehyde-3-phosphate dehydrogenase n=4 Tax=P... [more]
A0A0A6YYV3_DICDH3.350e-6986.78Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=D... [more]
A0A835ZBB7_9STRA6.750e-6384.87Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=T... [more]
A0A7S1TP60_9STRA6.470e-5878.26Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4P185_GUITH2.500e-5680.17Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S2HWW7_9STRA4.950e-5681.90Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=H... [more]
A0A7R9TZC8_9VIRI5.190e-5679.49Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
B8BQU2_THAPS1.260e-5581.03Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
A0A7S3EJH1_9RHOD3.770e-5580.17Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2RX48_9STRA8.180e-5579.31Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPRINTSPR00078G3PDHDRGNASEcoord: 93..108
score: 57.32
coord: 52..69
score: 78.13
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPANTHERPTHR10836GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASEcoord: 41..160
NoneNo IPR availableGENE3D3.30.360.10coord: 41..139
e-value: 8.2E-48
score: 165.0
NoneNo IPR availableGENE3D3.40.50.720coord: 140..151
e-value: 8.2E-48
score: 165.0
NoneNo IPR availablePANTHERPTHR10836:SF94coord: 41..160
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 41..137
IPR020829Glyceraldehyde 3-phosphate dehydrogenase, catalytic domainPFAMPF02800Gp_dh_Ccoord: 41..137
e-value: 1.4E-36
score: 125.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19227contigEcto-sp13_S_contig19227:423..920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19227.6150.1mRNA_Ecto-sp13_S_contig19227.6150.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19227 2..920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19227.6150.1 ID=prot_Ecto-sp13_S_contig19227.6150.1|Name=mRNA_Ecto-sp13_S_contig19227.6150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bp
MEVEMRTSNRIRMYALHPHNTPASPPSLPALHRCRTPQKPQVIPSLQGKL
TGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYT
EEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDL
MVHMATVDAKAGVKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020831GlycerAld/Erythrose_P_DH
IPR020829GlycerAld_3-P_DH_cat