prot_Ecto-sp13_S_contig1920.6137.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1920.6137.1
Unique Nameprot_Ecto-sp13_S_contig1920.6137.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
BLAST of mRNA_Ecto-sp13_S_contig1920.6137.1 vs. uniprot
Match: D7FUP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP6_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 3.690e-34
Identity = 62/78 (79.49%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    9 NLVKTLVGNPMPTANRWLLQLAAVDVFHDDTCCPETKLLKDAIKTHPIDADATEEPVAGAKPKSAMREGGKTKRTRSK 86
            N+VK LVGNPMPTA RWL QLAAVDV HD TCCPETKLLKDA+KTHPI+AD TE PVA AKP +A R+GGKTKR RSK
Sbjct:  204 NVVKALVGNPMPTAKRWLFQLAAVDVCHDGTCCPETKLLKDAVKTHPIEADDTETPVASAKPTNAKRKGGKTKRKRSK 281          
BLAST of mRNA_Ecto-sp13_S_contig1920.6137.1 vs. uniprot
Match: D7FHM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM3_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.730e-31
Identity = 61/78 (78.21%), Postives = 65/78 (83.33%), Query Frame = 0
Query:    9 NLVKTLVGNPMPTANRWLLQLAAVDVFHDDTCCPETKLLKDAIKTHPIDADATEEPVAGAKPKSAMREGGKTKRTRSK 86
            N+VK LVGNPMPTA RWLLQLAAVDV HDDTCCPETKLLKDA+KTHPI A+ TE PVA  KP SA  +GGKTK  RSK
Sbjct:  400 NVVKALVGNPMPTAKRWLLQLAAVDVCHDDTCCPETKLLKDAVKTHPIKAEDTETPVASGKPTSAKAKGGKTKPKRSK 477          
BLAST of mRNA_Ecto-sp13_S_contig1920.6137.1 vs. uniprot
Match: A0A6H5JAW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW4_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 8.750e-20
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
Query:   24 RWLLQLAAVDVFHDDTCCPETKLLKDAIKTHPIDADATEEPVAGAKPKS 72
            RWL Q AAVDV HDDTCCPE KLLKDA+KTHPI+AD TEEPVA A+PKS
Sbjct:   68 RWLRQRAAVDVCHDDTCCPEAKLLKDAVKTHPIEADDTEEPVASAEPKS 116          
BLAST of mRNA_Ecto-sp13_S_contig1920.6137.1 vs. uniprot
Match: A0A6H5JHM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM4_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.380e-17
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 0
Query:   24 RWLLQLAAVDVFHDDTCCPETKLLKDAIKTHPIDADATEEPVAGAKPKSAMREGGKTK 81
            RWLL LAAV+V HDDT  PETKLLKDA+  HPI AD TE+PVA AKPKSA R+GGKTK
Sbjct:  124 RWLLLLAAVNVCHDDTWYPETKLLKDAVNMHPIVADDTEKPVASAKPKSAERKGGKTK 181          
BLAST of mRNA_Ecto-sp13_S_contig1920.6137.1 vs. uniprot
Match: A0A6H5JUG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG3_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 9.470e-14
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0
Query:   36 HDDTCCPETKLLKDAIKTHPIDADATEEPVAGAKPKSA 73
            HDDTCCPETKLLKDA+KTHPI+AD TEEPVA AKPKSA
Sbjct:  450 HDDTCCPETKLLKDAVKTHPIEADDTEEPVASAKPKSA 487          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1920.6137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUP6_ECTSI3.690e-3479.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHM3_ECTSI2.730e-3178.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAW4_9PHAE8.750e-2081.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHM4_9PHAE1.380e-1775.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUG3_9PHAE9.470e-1489.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1920contigEcto-sp13_S_contig1920:10580..11065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1920.6137.1mRNA_Ecto-sp13_S_contig1920.6137.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1920 10580..14649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1920.6137.1 ID=prot_Ecto-sp13_S_contig1920.6137.1|Name=mRNA_Ecto-sp13_S_contig1920.6137.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MIRRTGTANLVKTLVGNPMPTANRWLLQLAAVDVFHDDTCCPETKLLKDA
IKTHPIDADATEEPVAGAKPKSAMREGGKTKRTRSK*
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