prot_Ecto-sp13_S_contig1919.6130.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1919.6130.1
Unique Nameprot_Ecto-sp13_S_contig1919.6130.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length971
Homology
BLAST of mRNA_Ecto-sp13_S_contig1919.6130.1 vs. uniprot
Match: A0A6H5K3T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T9_9PHAE)

HSP 1 Score: 1077 bits (2784), Expect = 0.000e+0
Identity = 779/991 (78.61%), Postives = 793/991 (80.02%), Query Frame = 0
Query:    1 MRTFGLLSASLFEVVGNSPAMAVRVAAVRAGETGNSAS--GXXXXXXXXXXXXXXXXXXLADFEVPHSEHLGDGTVGVAAQSARPVCIEVVCPTAERRGFNGGREGTAAVAGSPDPCVASSTVLCIPVMLQAAPL-PKVATTPATGFVGAPPPALGGSTIPGVEVVGVLRAARAGTGSFAGDDARALSAFSGQLALAMVAERAVAESRAGAVAKASREARSLRRQACRKVATLFTERAVAGALLRHRRVPAGVTTXXXXXXXXXXXXXXXXXXXXXXDKEELWRSVAGIAARALGCERVDLLRVTSFSDGGGDGTAPADLLSSRCPPSRSFRRRSREALLAARXXXXXXXXXXXXXXXXXXXXGEGRGGGSEGPDATVGSWLCVPVLSLPSSRGEGGGTGAVTVCCAANKKNGRSFGDVDEAMLGTIAALYAVAASWLPXXXXXXXXXXXXXXXXXXXDK--GTSPAAFPGRPEATGTVEPTPRAAMRELGQSGGSPSPSLASPPXXXXXXXXXXXXXXGPQQEWSRRFGSSRPEPRLLDEGNGDRDSRRSPTAFSGERQQXXXXLPP---EDACSGEGRRDEAGDXXXXXXXXXXXXDGKIMSTHSGNEASLAIHRAAEANVELRERAERAERMLARTRTRLCRALEEGGGGATAATSDXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------SSGGNDCSVLGARKRGDESGWRGGGRPRGRGRTEEARREGAPGWRQRTSPPSRSNVPASSSDTWEGESHYHSDDTGDRRQRDRDXXXXXXXXXXXXXXXXXXXXXXXXXXX--GTSSRVKWHGTQXXXXXXXXXXXXXXXXXXXXXXKQLRASDVARMRQVVERLRVATYELEAERAGRADAPARVGEGAEASLPPPAKHSSGAVHERGGTXXXXXXMSPNVAGRXXXXXXXXXXXXXXXXXAA-LVRENANLRRRLFGLVMLEELEGRAVREGLLPLAGGGGVAEDMFPSDK 970
            MRTFGLLSASLFEVVGNSPAMAVRVAAVRAGETGN+AS  G     XXXXXXXXXXXX LADFEVPHSEHLGDGTVGVAAQSARPVCIEVVCPTAERRGFNGGRE TAAVAGSPDPC ASSTVLCIPVMLQAAPL PKVATTPATGFVGAPPP L GSTIPGVEVVGVLRAARAGTGSFAGDDARALSAFSGQLALAMVAERAVAESRAGAVAKASREARSLRRQACRKVATLFTERAVAGALLRH RVP GVT XXXXXXXXXXXXXXXXXXXXXX KEELWRSVAGIAARALGCERVDLLRVTSFSDG                                 XXXXXXXXXXXXXXXXXX   EGRGGGSEGPDA +GSWLCVPVLSLP SRGE GG GAVTVCCA NKKNGRSFGDVDEAMLGTIAALYAVAASWLP                   D+  GTSPAAFPG+P AT TVEPTP AAMREL Q  GS SP  A+PP              GPQQEWSRRFG SRPEPRLLDEGNGDRDSRRSPTAFSGE+  XXXX      EDA SG+GRRDEAGD     XXXX   DGKIMST+SGNEASLAI RAA+ANVELRERA     MLA TRTRLCRAL EGGGGATAATSD             XXXXXXXXXXXXXXX          S GGNDCSVLGARKRGD+SGWRGGGRPRGRGRT+EAR+E AP WRQRTSPP RSN PASSSDTW GESHYHSDDTGDRRQR RD                 XXXXXXX     GTSSRVKWHGTQ     XXXXXXXXXXXXXXXXXKQLRASDVARMRQVVERLRV TYELEAERAGRAD+PAR GEGAE SLPPPA H+SGAVHERGGTXXXXXX SPNVA R XX XXXXXXXXXX   AA LVRENA LRRRLFGLVMLEELEGRAVREGLLPLAGGGGVAEDMFPSDK
Sbjct: 2097 MRTFGLLSASLFEVVGNSPAMAVRVAAVRAGETGNNASISGAAAGPXXXXXXXXXXXXMLADFEVPHSEHLGDGTVGVAAQSARPVCIEVVCPTAERRGFNGGREETAAVAGSPDPCGASSTVLCIPVMLQAAPLLPKVATTPATGFVGAPPPTLRGSTIPGVEVVGVLRAARAGTGSFAGDDARALSAFSGQLALAMVAERAVAESRAGAVAKASREARSLRRQACRKVATLFTERAVAGALLRHTRVPGGVTXXXXXXXXXXXXXXXXXXXXXXXXKEELWRSVAGIAARALGCERVDLLRVTSFSDGXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXMSDEGRGGGSEGPDAAIGSWLCVPVLSLPLSRGEDGGDGAVTVCCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLPPPSLPPTAESSDHNHSNDDDERTGTSPAAFPGQPGATATVEPTPGAAMRELRQPDGSSSPLRAAPPAPVQPQPAAASPAVGPQQEWSRRFGPSRPEPRLLDEGNGDRDSRRSPTAFSGEQXXXXXXXXXXXXEDAFSGKGRRDEAGDRRSGSXXXXSG-DGKIMSTNSGNEASLAILRAAKANVELRERAXXXXXMLATTRTRLCRALGEGGGGATAATSDQSLSSGSSVGSVSXXXXXXXXXXXXXXXXXXXXXXXXXSGGGNDCSVLGARKRGDDSGWRGGGRPRGRGRTQEARKERAPEWRQRTSPPPRSNAPASSSDTWGGESHYHSDDTGDRRQRVRDEEAQPPEVAGRQQGDRQXXXXXXXSLSASGTSSRVKWHGTQEEEGRXXXXXXXXXXXXXXXXXKQLRASDVARMRQVVERLRVVTYELEAERAGRADSPARAGEGAETSLPPPATHNSGAVHERGGTXXXXXXXSPNVASRGXXIXXXXXXXXXXEQEAAALVRENAKLRRRLFGLVMLEELEGRAVREGLLPLAGGGGVAEDMFPSDK 3080          
BLAST of mRNA_Ecto-sp13_S_contig1919.6130.1 vs. uniprot
Match: D7FYZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ7_ECTSI)

HSP 1 Score: 1035 bits (2675), Expect = 0.000e+0
Identity = 767/977 (78.51%), Postives = 778/977 (79.63%), Query Frame = 0
Query:    1 MRTFGLLSASLFEVVGNSPAMAVRVAAVRAGETGNSASGXXXXXXXXXXXXXXXXXXLADFEVPHSEHLGDGTVGVAAQSARPVCIEVVCPTAERRGFNGGREGTAAVAGSPDPCVASSTVLCIPVMLQAAPLPKVATTPATGFVGAPPPALGGSTIPGVEVVGVLRAARAGTGSFAGDDARALSAFSGQLALAMVAERAVAESRAGAVAKASREARSLRRQACRKVATLFTERAVAGALLRHRRVPAGVTTXXXXXXXXXXXXXXXXXXXXXXD-KEELWRSVAGIAARALGCERVDLLRVTSFSDGGGDGTAPADLLSSRCPPSRSFRRRSREALLAARXXXXXXXXXXXXXXXXXXXXGEGRGGGSEGPDATVGSWLCVPVLSLPSSRGEGGGTGAVTVCCAANKKNGRSFGDVDEAMLGTIAALYAVAASWLPXXXXXXXXXXXXXXXXXXX--DKGTSPAAFPGRPEATGTVEPTPRAAMRELGQSGGSPSPSLASPPXXXXXXXXXXXXXXGPQQEWSRRFGSSRPEPRLLDEGNGDRDSRRSPTAFSGERQQXXXXLPPEDACSGEGRRDEAGDXXXXXXXXXXXXDGKIMSTHSGNEASLAIHRAAEANVELRERAERAERMLARTRTRLCRALEEGGGGATAATSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGGNDCSVLGARKRGDESGWRGGGRPRGRGRTEEARREGAPGWRQRTSPPSRSNVPASSSDTWEGESHYHSDDTGDRRQ--RDRDXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSSRVKWHGTQXXXXXXXXXXXXXXXXXXXXXXKQLRASDVARMRQVVERLRVATYELEAERAGRADAPARVGEGAEASLPPPAKHSSGAVHERGGTXXXXXXMSPNVAGRXXXXXXXXXXXXXXXXXA--ALVRENANLRRRLFGLVMLEELEGRAVREGLLPLAGGGGVAEDMFPSDK 970
            MRTFGLLSASLFEVVGNSPAMAVRVAAVRAGETGN+AS    XXXXXXXXXXXXXX LA+FEVPHSEHLGDGTVGVAAQSARPVCIEVVCPTAERRGFNGGREGTAAVA SPDPC ASSTVLCIPVMLQAAPLPKVATTPATGFVGAPPPALGGSTIPGVEVVGVLRAAR+GTGSFAGDDARALSAFSGQLALAMVAERAVAESRAGAVAKASREARSLRRQACRKVATLFTERAVAGALLRH RVP GVTT   XXXXXXXXXXXXXXXXXXX  KEELWRSVAGIAARALGCERVDLLRVTSFSDG                                 XXXXXXXXXXXXXX      GEGRGGGSEGPDA +GSWLCVPVLSLPSSR E GG GAVTVCCA NKKNGRSFGDVDEAMLGTIAALYAVAASWLP XXXXXXXXXXXXXXXXXX    GTSPAAFPG PEAT TVEPTPRAAMREL Q  GS SPSLA+PP   XXXXXXXXX  GPQQEWSRRFGSSRPEPRLLDE NGDRDSRRSPTAF GE   XXXX     A SGEGRRDEAGD  XXXXXXXX  DGKI+S++SGNEASLAIHRAAEANVELRERAERAERMLA TRT                                                            KRGD+SGWRGGGRPRGRGRTE AR+EGAPGWRQRTSPP RSNVPASSSDTWEGESHYHSDDTGDRRQ  RD +               XXXXXXXXXXXX  SSRVKWHGTQ  XXXX      XXXXXXXXXX QLRASDVARMRQVVERLRVATYELEAERAGRADAPAR GEGAEASLPPPAK SSG VHERG T XXXXX   NVAGR      XXXXXXXXXXX   ALVRENANLRRRLFGLVMLEELEGRAVREGLLPL GGGGVAEDMFPSDK
Sbjct:   28 MRTFGLLSASLFEVVGNSPAMAVRVAAVRAGETGNNASDSGAXXXXXXXXXXXXXXALAEFEVPHSEHLGDGTVGVAAQSARPVCIEVVCPTAERRGFNGGREGTAAVASSPDPCGASSTVLCIPVMLQAAPLPKVATTPATGFVGAPPPALGGSTIPGVEVVGVLRAARSGTGSFAGDDARALSAFSGQLALAMVAERAVAESRAGAVAKASREARSLRRQACRKVATLFTERAVAGALLRHTRVPGGVTTTKVXXXXXXXXXXXXXXXXXXXXXKEELWRSVAGIAARALGCERVDLLRVTSFSDGXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXSVASMSGEGRGGGSEGPDAAIGSWLCVPVLSLPSSRAEDGGDGAVTVCCAVNKKNGRSFGDVDEAMLGTIAALYAVAASWLPPXXXXXXXXXXXXXXXXXXXXQTGTSPAAFPGWPEATATVEPTPRAAMRELRQPDGSSSPSLAAPPLPAXXXXXXXXXAVGPQQEWSRRFGSSRPEPRLLDEDNGDRDSRRSPTAFGGEXXXXXXXXXX--AFSGEGRRDEAGDKRXXXXXXXXSGDGKIVSSNSGNEASLAIHRAAEANVELRERAERAERMLATTRT------------------------------------------------------------KRGDDSGWRGGGRPRGRGRTE-ARKEGAPGWRQRTSPPPRSNVPASSSDTWEGESHYHSDDTGDRRQLVRDEEAQSPEVAGRQQGDRQXXXXXXXXXXXXXXSSRVKWHGTQEEXXXXVGFGTRXXXXXXXXXXXQLRASDVARMRQVVERLRVATYELEAERAGRADAPARAGEGAEASLPPPAKRSSGVVHERGVTQXXXXXXXXNVAGRDGGIPMXXXXXXXXXXXXXXALVRENANLRRRLFGLVMLEELEGRAVREGLLPLTGGGGVAEDMFPSDK 934          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1919.6130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3T9_9PHAE0.000e+078.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYZ7_ECTSI0.000e+078.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 913..933
NoneNo IPR availableCOILSCoilCoilcoord: 607..634
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..970
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1919contigEcto-sp13_S_contig1919:2971..7104 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1919.6130.1mRNA_Ecto-sp13_S_contig1919.6130.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1919 52..7480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1919.6130.1 ID=prot_Ecto-sp13_S_contig1919.6130.1|Name=mRNA_Ecto-sp13_S_contig1919.6130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=971bp
MRTFGLLSASLFEVVGNSPAMAVRVAAVRAGETGNSASGSGAAAGPGSSA
AAAAAAALADFEVPHSEHLGDGTVGVAAQSARPVCIEVVCPTAERRGFNG
GREGTAAVAGSPDPCVASSTVLCIPVMLQAAPLPKVATTPATGFVGAPPP
ALGGSTIPGVEVVGVLRAARAGTGSFAGDDARALSAFSGQLALAMVAERA
VAESRAGAVAKASREARSLRRQACRKVATLFTERAVAGALLRHRRVPAGV
TTTTVAPSSGRAAEAVAGRRRGGDDKEELWRSVAGIAARALGCERVDLLR
VTSFSDGGGDGTAPADLLSSRCPPSRSFRRRSREALLAARASSSSSAAAA
AAAASSASTSGEGRGGGSEGPDATVGSWLCVPVLSLPSSRGEGGGTGAVT
VCCAANKKNGRSFGDVDEAMLGTIAALYAVAASWLPPPPLPPTAESSDHN
NNNNNDKGTSPAAFPGRPEATGTVEPTPRAAMRELGQSGGSPSPSLASPP
APSPAQPAAAPPAVGPQQEWSRRFGSSRPEPRLLDEGNGDRDSRRSPTAF
SGERQQQQQPLPPEDACSGEGRRDEAGDKRRSGSGGGGGGDGKIMSTHSG
NEASLAIHRAAEANVELRERAERAERMLARTRTRLCRALEEGGGGATAAT
SDQSLSSGSSGSSVSVDSVSLSSASSKASSSSGGNDCSVLGARKRGDESG
WRGGGRPRGRGRTEEARREGAPGWRQRTSPPSRSNVPASSSDTWEGESHY
HSDDTGDRRQRDRDEEAPPPEVAGRQQGDRRRRGRRSLSAAGTSSRVKWH
GTQEEEGGGVGSETRRSRVRRQQQQKQLRASDVARMRQVVERLRVATYEL
EAERAGRADAPARVGEGAEASLPPPAKHSSGAVHERGGTQQPPPTMSPNV
AGRGGGIPVAAAAAEREQEAAALVRENANLRRRLFGLVMLEELEGRAVRE
GLLPLAGGGGVAEDMFPSDK*
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