prot_Ecto-sp13_S_contig1917.6121.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1917.6121.1
Unique Nameprot_Ecto-sp13_S_contig1917.6121.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: D8LCV7_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV7_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 4.580e-77
Identity = 147/153 (96.08%), Postives = 148/153 (96.73%), Query Frame = 0
Query:    1 MERRPVDFAVGQGELARRRAALDTLRRQVGAVRGSMGGRXXXXXXXXXXXXXXGSMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 153
            MERRPVDFAVGQGELARRRAALDTL R+VGAVRGSMGG XXXXXXXXXXXXXX  MSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGL TEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL
Sbjct:    1 MERRPVDFAVGQGELARRRAALDTLHREVGAVRGSMGGXXXXXXXXXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLLTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 153          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A6H5KPB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB3_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 1.470e-74
Identity = 143/153 (93.46%), Postives = 145/153 (94.77%), Query Frame = 0
Query:    1 MERRPVDFAVGQGELARRRAALDTLRRQVGAVRGSMGGRXXXXXXXXXXXXXXGSMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 153
            MERRPVDFAVG GELARRRA L+TLRR+VGAVRG MGG  XXXXXXXXXXXXX  MSRLEQQRETMKEHDRMLADLGRGVGRLKTQS MINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL
Sbjct:   48 MERRPVDFAVGHGELARRRAELETLRREVGAVRGPMGGGQXXXXXXXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSAMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 200          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A835ZEW5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.050e-27
Identity = 73/183 (39.89%), Postives = 103/183 (56.28%), Query Frame = 0
Query:    2 ERRPVDFAVGQGELARRRAALDTLRRQVGAVRGSMGGRXXXXXXXXXXXXXXGSMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEK-------------------------------IREKSKTFNLYVIILVLSIILAILVFSGL 153
            E RP+D  + + ++ RRR+ L+ L +Q+ +V G  G                G   RL +QRE M+EHDR++ +LG+GVGRL   SV+IN+E +LHVRLLDDM+ D ERA++ L  E RHA+K                               +R+KSKTF LYV I+VL+I+L +L+ SGL
Sbjct:   38 ETRPMDHGLTRVKVLRRRSQLEGLEQQLQSVGGGGGA-------GMRGSGSGGISGRLAKQREAMQEHDRIVEELGKGVGRLHQTSVVINDEANLHVRLLDDMDEDIERANASLMQETRHAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQKSKTFWLYVTIIVLTIVLVLLIVSGL 213          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A4D9D1R7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1R7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 6.110e-23
Identity = 63/160 (39.38%), Postives = 90/160 (56.25%), Query Frame = 0
Query:    1 MERRPVDFAVGQGELARRRAALDTLRRQVGAV-------RGSMGGRXXXXXXXXXXXXXXGSMSRLEQQR-ETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSG 152
            ME+ P  F + Q ++ RRR  +  LR Q+  +        G   G               G +  L QQR E + E D +L DLG+GV RLK Q ++I +ET +H +LL+D++GD E A+S LR EARHA++IRE+S    LY+ I +L IIL +L+  G
Sbjct:   58 MEQNPGQFGISQSDVVRRRELVKGLRHQLSLLGTSSHGTNGLATGTTRDGSAASGGGGVPGGLRTLAQQRREIIHEQDELLEDLGKGVDRLKMQGLVIRDETGIHHKLLEDIDGDVEAAASSLRMEARHAQRIREQSTVCRLYICIAILLIILVLLLVIG 217          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A7S1XYZ3_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYZ3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.130e-20
Identity = 59/152 (38.82%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    1 MERRPVDFAVGQGELARRRAALDTLRRQVGAVRGSMGGRXXXXXXXXXXXXXXGSMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSG 152
            M ++P DF +   E+ARR++ + + + Q+  +R  MG                G   + ++Q++ M   D M+AD+G+GV RL   +  I +ET LHVRLLD+M+ D +RA++GLR EARHAE+IR KS+   LY+ I +LS +L +L+  G
Sbjct:  111 MAQKPADFFMSSSEVARRKSLIASYKEQLHNLR--MG------RDPGAAGADQGQQMK-QRQKDIMALQDDMIADIGKGVDRLGNTANKIKDETQLHVRLLDEMDVDVDRATAGLRAEARHAEQIRLKSQNCYLYICIAILSCVLLLLIVLG 253          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A2D4BY68_PYTIN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY68_PYTIN)

HSP 1 Score: 77.4 bits (189), Expect = 1.230e-14
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0
Query:   59 LEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSG 152
            L  Q++ MK+ D+ L  + +GV  LK  SV + +ET LHVRLL+D++ D  RA+ GL TE   A ++  +S  F LY+IILVL +IL  L+  G
Sbjct:  111 LGMQKQIMKDQDQQLDVISKGVANLKNYSVTMKDETELHVRLLNDIDEDVSRATDGLETEGARAAQVARQSSNFKLYMIILVLFVILIFLLIVG 204          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A6G0WAN7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAN7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 7.230e-14
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   59 LEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIIL 145
            L  Q + M++ D  L  +G+GV  LK  S+ +  ET LH RLLDD+  D +RA+SGL +E   AE + +KS  F LY+ ILVLS+IL
Sbjct:  115 LRVQNQIMQDQDEQLNIIGQGVSNLKQYSLAVKNETDLHARLLDDINIDVDRATSGLESEGDRAEYVAKKSSNFRLYMAILVLSVIL 201          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A0P1AUD1_PLAHL (SNARE protein TLG1/Syntaxin 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUD1_PLAHL)

HSP 1 Score: 71.2 bits (173), Expect = 3.280e-12
Identity = 37/94 (39.36%), Postives = 60/94 (63.83%), Query Frame = 0
Query:   59 LEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSG 152
            L+ Q + MK+ D+ L  +  GV  L+  S+ + +ET LHVRLL+D++ D  R + GL +E   A ++ ++S    LY+IILVL++IL  L+ +G
Sbjct:  125 LKMQNQIMKDQDQQLDLISYGVSNLRNYSLSVKDETELHVRLLNDIDNDVARVTDGLESEGARAARVAKQSNNTRLYLIILVLTLILIFLLLTG 218          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A485KLB7_9STRA (Aste57867_8788 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLB7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.630e-12
Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   59 LEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIIL 145
            L  Q + M + D  L  +G+GV  LK  S+ + +ET LHVRLLDD+  D E+A++GL +E   A  + ++S  F LY+ I+VLS+IL
Sbjct:  115 LRVQNQMMLDQDEQLNMIGQGVANLKQYSLAVKDETDLHVRLLDDINVDVEKATTGLESEGDRAAILAKRSSNFRLYLAIVVLSVIL 201          
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Match: A0A024G688_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G688_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.390e-11
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   62 QRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILV 140
            Q++ M++ D  L  +G+GV  LK  S+ + +ET LH+RLLDDM+GD   A  GL TE   A KI  +S    LYV I+V
Sbjct:  113 QKQIMRDQDDQLDIIGKGVANLKNFSMAVKDETDLHIRLLDDMDGDVLHAKDGLNTEGARAAKIARQSGNIKLYVTIVV 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1917.6121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LCV7_ECTSI4.580e-7796.08Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6H5KPB3_9PHAE1.470e-7493.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEW5_9STRA7.050e-2739.89Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A4D9D1R7_9STRA6.110e-2339.38t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S1XYZ3_9STRA4.130e-2038.82Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A2D4BY68_PYTIN1.230e-1444.68t-SNARE coiled-coil homology domain-containing pro... [more]
A0A6G0WAN7_9STRA7.230e-1447.13t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0P1AUD1_PLAHL3.280e-1239.36SNARE protein TLG1/Syntaxin 6 n=1 Tax=Plasmopara h... [more]
A0A485KLB7_9STRA5.630e-1243.68Aste57867_8788 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024G688_9STRA1.390e-1145.57t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 63..126
e-value: 7.5E-12
score: 47.0
NoneNo IPR availablePANTHERPTHR19957:SF124SYNTAXIN-8coord: 10..149
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 10..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 152..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..131
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 54..125
NoneNo IPR availableTMHMMTMhelixcoord: 132..151
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 63..125
score: 8.638

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1917contigEcto-sp13_S_contig1917:1098..4486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1917.6121.1mRNA_Ecto-sp13_S_contig1917.6121.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1917 1098..4486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1917.6121.1 ID=prot_Ecto-sp13_S_contig1917.6121.1|Name=mRNA_Ecto-sp13_S_contig1917.6121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
MERRPVDFAVGQGELARRRAALDTLRRQVGAVRGSMGGRRGGRAAAAGAA
GGSGSMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRL
LDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVF
SGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom