prot_Ecto-sp13_S_contig19167.6118.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19167.6118.1
Unique Nameprot_Ecto-sp13_S_contig19167.6118.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.560e-22
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0
Query:    1 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI
Sbjct: 2831 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 2877          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: D8LT97_ECTSI (Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT97_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 8.900e-22
Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 0
Query:    1 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            MVAAKDHPDY+KYFKMLKMGLPRGAALQKMATEGKDQAILDTPDAL+
Sbjct: 1946 MVAAKDHPDYQKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALV 1992          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: D8LTA3_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA3_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 3.280e-11
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            +V AK HP Y KYFKML +GLPR AAL +M+ +G DQAILD PDA++
Sbjct:  693 LVQAKYHPKYNKYFKMLSVGLPRSAALLRMSKDGVDQAILDAPDAML 739          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A024TTB1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTB1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.120e-11
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            MVAAKDHP Y KYFK++KMG+P      K+++EG D AILDTPDAL+
Sbjct: 1203 MVAAKDHPTYAKYFKLMKMGMPMVQIQLKVSSEGLDPAILDTPDALL 1249          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A3R6ZMD3_9STRA (GBD/FH3 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZMD3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.120e-11
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            MVAAKDHP Y KYFK++KMG+P      K+++EG D AILDTPDAL+
Sbjct: 1106 MVAAKDHPTYAKYFKLMKMGMPMVQIQLKVSSEGLDPAILDTPDALL 1152          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A662WF47_9STRA (FYVE-type domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WF47_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.610e-9
Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    2 VAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            VAAKDHPDY K+FK+L MGLP      KM   G D AILD PDA+I
Sbjct:  288 VAAKDHPDYLKFFKLLSMGLPAEQVKLKMQASGMDPAILDDPDAII 333          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A662YIW8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YIW8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.610e-9
Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    2 VAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            VAAKDHPDY K+FK+L MGLP      KM   G D AILD PDA+I
Sbjct:  323 VAAKDHPDYLKFFKLLSMGLPAEQVKLKMQASGMDPAILDDPDAII 368          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A1V9ZW19_9STRA (Formin-homology 2 domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW19_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.530e-9
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 VAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            V A++HPDY KYFK+LKMG+P      K ++EG D AILDTPDA+I
Sbjct:  187 VKAEEHPDYVKYFKLLKMGMPLEHVKLKASSEGIDTAILDTPDAII 232          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A397A2G6_9STRA (FH2 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A2G6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.560e-9
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            +VAAKDHP Y KYFK++KMG+P      K ++EG + AILDTPDA++
Sbjct:  317 LVAAKDHPAYAKYFKLMKMGMPLEQIKLKASSEGLNTAILDTPDAML 363          
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Match: A0A3R7BWK8_9STRA (FH2 domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BWK8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.560e-9
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI 47
            +VAAKDHP Y KYFK++KMG+P      K ++EG + AILDTPDA++
Sbjct:  268 LVAAKDHPAYAKYFKLMKMGMPLEQIKLKASSEGLNTAILDTPDAML 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19167.6118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR06_9PHAE2.560e-22100.00FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LT97_ECTSI8.900e-2295.74Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D8LTA3_ECTSI3.280e-1163.83UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A024TTB1_9STRA6.120e-1163.83Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A3R6ZMD3_9STRA6.120e-1163.83GBD/FH3 domain-containing protein n=1 Tax=Aphanomy... [more]
A0A662WF47_9STRA2.610e-963.04FYVE-type domain-containing protein (Fragment) n=1... [more]
A0A662YIW8_9STRA2.610e-963.04Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A1V9ZW19_9STRA3.530e-960.87Formin-homology 2 domain-containing protein (Fragm... [more]
A0A397A2G6_9STRA3.560e-957.45FH2 domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A3R7BWK8_9STRA3.560e-957.45FH2 domain-containing protein (Fragment) n=2 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019309WASH complex subunit 3PFAMPF10152CCDC53coord: 2..41
e-value: 2.1E-11
score: 44.5
IPR019309WASH complex subunit 3PANTHERPTHR13015PROTEIN AD-016-RELATEDcoord: 4..44
NoneNo IPR availablePANTHERPTHR13015:SF0WASH COMPLEX SUBUNIT 3coord: 4..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19167contigEcto-sp13_S_contig19167:3166..3306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19167.6118.1mRNA_Ecto-sp13_S_contig19167.6118.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19167 3166..3327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19167.6118.1 ID=prot_Ecto-sp13_S_contig19167.6118.1|Name=mRNA_Ecto-sp13_S_contig19167.6118.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
MVAAKDHPDYEKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDALI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019309WASHC3