prot_Ecto-sp13_S_contig1915.6111.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1915.6111.1
Unique Nameprot_Ecto-sp13_S_contig1915.6111.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length934
Homology
BLAST of mRNA_Ecto-sp13_S_contig1915.6111.1 vs. uniprot
Match: A0A6H5JKM2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKM2_9PHAE)

HSP 1 Score: 1132 bits (2927), Expect = 0.000e+0
Identity = 659/878 (75.06%), Postives = 696/878 (79.27%), Query Frame = 0
Query:  172 IYVSNRARIDSKAVKAVVDYASKQATAGTGKLLLAASGAASPALLLMGVN-TTETQVALNNSVQLLSMGIMPDSISLSPRLLTSLKDFDDEDKRLDAAYQR---------------------------------------------------------------QRRRRSKPLPARLLGSLPSTINKASDLAYEVEQEV--------------------------------------------KYERAGSRANKLLKPIGLSLPEAKGNGLLLGRTPSGMAGKLLEASDPSLAANSSPSRILGSRRLEKTPAVVEPPVQEVSARREAMPPAPDPVSVYDRFEQEGVDPQGGELSSAERALAEMLASQPDVFTKQLSKCIGSICDEVQVQERGVRAANAVLCSTEPVITGLDEALEREAVLLEELKNVTRDVQQMYVLAEMSEAVEAAETYLRRLEDLSANVVELAVYLEAYIGGEIARHGDYSLRLKLK--------IERLETIKSRVLETKGLGGIQDSSKAAQVELSSRTIGLLQSFDGEVVAGHEEAKAVGGRLDVIWRESAERARDEAGHAHECALVAACRLWKAAAVEGTRKRASTLDSVRLEWTRIQEVQDSTTSTMGVPSKVGRKEFARATGAEVRAGEGDRERLRAVKDEAASDTEGGHQQASMAPVERGVTAAPAPIFPGRSRADHDIELTPPMTTSPDITPVTDESTTVQTTEAEMVVDLDQSVKSAEVVDAVVVDEGLVRGDSSVTSLNEYSSRRSGDGGLSRKGSLSAEHTTMASEESSIELVVDESSSFVDVDAETEDDVSDPARVGLKFLDVFALLVEKVLFVGLPTLVSGGSLVWQRVDNAVNGAKGRKGWKLLDRLKKDSAG 933
            IYV+NR RIDSKAVKAVVDYASKQA AGTGKLLLAASGA SPALLLMGVN TTETQ ALNNSVQLLSMGI+PDSISLSP+LL SLKDFDD+DKRLDAAYQR                                                               QRRRRSKPLPARLLGSLPSTINKASDLAYEVEQEV                                            KYERAGSRANKLL+PIGLSLPEAK NGLLLGRTPSG AGK+LEASD SLAAN SPSRILGSRRLE TPAVVEPP+QEVSARRE MPP PD V V+DRF ++GVD +GGELSS ERALAEMLASQPDVFTKQLSKCI SI DEVQ+QERG+RAANAVLCSTEPVI GL+EALEREAVLLEELKNVTR+VQQ YVLAEM                    VVELAVYLEAYIGGE ARHG+YS RL LK        IERLETIKSR+L+T+GLGGIQDSS+AAQVELSSRTIGLLQ FDGEVVAGHEEAKAVGGRLDVIWRESAERARDEAG AHE ALVAACRLWKAAAVEG+ KRASTLDSVRLE TRIQ++QDSTTSTMGVP KVGR+EFARATGAEVRA EGDRERLRAVKDEAA DTEGG QQAS++PVERGVTAAPAP FPGRS+ADH ++LTPPMTT+PDITPV  ESTTVQT EAEMVVDLDQSVKSAEVVDAVVVDE  VRG S+ TSL+E SSRRSGDGGLSRKG LSAE TT+ASEESSIELVVD+SSSFVDV+AE EDDVSDPARVGLKFLDVFALL+EKVLFVGLPTLVSGGSLVWQR+DNAVNGAKGRKGWKLLDRLKKDSAG
Sbjct:    7 IYVANRPRIDSKAVKAVVDYASKQAAAGTGKLLLAASGAGSPALLLMGVNNTTETQAALNNSVQLLSMGIVPDSISLSPKLLASLKDFDDDDKRLDAAYQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGQTGNRAARRRQSSFRLQLQRRRRSKPLPARLLGSLPSTINKASDLAYEVEQEVRPLRSLSRRFSARTKAKLESGLKPPTHSLLHEQHYVRLFAAVQVKYERAGSRANKLLRPIGLSLPEAKRNGLLLGRTPSGSAGKILEASDASLAANPSPSRILGSRRLETTPAVVEPPIQEVSARREVMPPLPDLVGVFDRFGRKGVDARGGELSSTERALAEMLASQPDVFTKQLSKCIDSIGDEVQMQERGLRAANAVLCSTEPVIAGLEEALEREAVLLEELKNVTRNVQQTYVLAEMXXXXXXXXXXXXXXXXXXXXVVELAVYLEAYIGGETARHGEYSSRLNLKSRSSVTNLIERLETIKSRMLQTRGLGGIQDSSRAAQVELSSRTIGLLQYFDGEVVAGHEEAKAVGGRLDVIWRESAERARDEAGRAHEYALVAACRLWKAAAVEGSGKRASTLDSVRLELTRIQDIQDSTTSTMGVPRKVGREEFARATGAEVRAREGDRERLRAVKDEAARDTEGGDQQASVSPVERGVTAAPAPSFPGRSQADHGVKLTPPMTTTPDITPVAGESTTVQTPEAEMVVDLDQSVKSAEVVDAVVVDEASVRGGSAATSLDENSSRRSGDGGLSRKGFLSAERTTIASEESSIELVVDKSSSFVDVEAEMEDDVSDPARVGLKFLDVFALLIEKVLFVGLPTLVSGGSLVWQRLDNAVNGAKGRKGWKLLDRLKKDSAG 884          
BLAST of mRNA_Ecto-sp13_S_contig1915.6111.1 vs. uniprot
Match: A0A835Z0K6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K6_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.330e-21
Identity = 97/295 (32.88%), Postives = 144/295 (48.81%), Query Frame = 0
Query:   70 QLSDMDARVIDELLRDPAFLDSILEQEVRLGGEGVHEGGGGMAANSTVSVGNSSSRALAKAGEIPSWYSSDYDSVTMQVVEELQLSVKGILAKVSAAFESAGIYVSNRARIDSKAVKAVVDYASKQATAGTGKLLLAASGAASPALLLMGV-NTTETQ------------VALNNSVQLLSMGIMP----DSISLSPRLLTSLKDFDDEDKRLDAAYQRQRRRRSKPLP------------------ARLLGSLPSTINKASDLAYEVEQEVKYERAGSRANKLLKPIGLSLPEA 329
            +LSD+DA V+ EL++D  F+ S+  +E      G+ +   G+      + G     A A AGE        Y S T Q+ E L L     +AKV AA E+A I + N+ ++D   V  V +   ++AT    + L AA+ AA P +LL    N T               + L     LL +G+ P    ++   +P LL + K F+DED RL AAY R +R+R+  LP                   +LLG+LP+ +  A DLAY VEQEV+YE+ G R  ++L+ +G+ L  A
Sbjct:  209 RLSDIDAAVLRELMQDQEFMSSVAMKE------GLKQQLDGLQDEYAAAAGGKG--AGAAAGE--------YSSATFQIFEGLSLGWGTFVAKVGAAVETAAIAIQNKVQVDINTVLGVTNAIVQRATYDARRTLAAAATAARPDMLLAPARNVTRXXXXXXXXXXXXPALDLGLGFTLLQLGVNPFEEVNAGGAAPELLDAFKGFEDEDARLRAAYARGKRKRNASLPEASSAAPRFSVSRQTAEACKLLGALPAAVGAADDLAYAVEQEVRYEKPGRRTTQVLRRVGIPLSGA 487          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1915.6111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKM2_9PHAE0.000e+075.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0K6_9STRA1.330e-2132.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 473..493
NoneNo IPR availableCOILSCoilCoilcoord: 500..523
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..933
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1915contigEcto-sp13_S_contig1915:3727..10931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1915.6111.1mRNA_Ecto-sp13_S_contig1915.6111.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1915 3613..11728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1915.6111.1 ID=prot_Ecto-sp13_S_contig1915.6111.1|Name=mRNA_Ecto-sp13_S_contig1915.6111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=934bp
MRKGKLVVLVGLASPHWAGGFLHVVQVPSSRGNLARVGKPTRCVDACRAP
GRRQSTLLLAATEEADATRQLSDMDARVIDELLRDPAFLDSILEQEVRLG
GEGVHEGGGGMAANSTVSVGNSSSRALAKAGEIPSWYSSDYDSVTMQVVE
ELQLSVKGILAKVSAAFESAGIYVSNRARIDSKAVKAVVDYASKQATAGT
GKLLLAASGAASPALLLMGVNTTETQVALNNSVQLLSMGIMPDSISLSPR
LLTSLKDFDDEDKRLDAAYQRQRRRRSKPLPARLLGSLPSTINKASDLAY
EVEQEVKYERAGSRANKLLKPIGLSLPEAKGNGLLLGRTPSGMAGKLLEA
SDPSLAANSSPSRILGSRRLEKTPAVVEPPVQEVSARREAMPPAPDPVSV
YDRFEQEGVDPQGGELSSAERALAEMLASQPDVFTKQLSKCIGSICDEVQ
VQERGVRAANAVLCSTEPVITGLDEALEREAVLLEELKNVTRDVQQMYVL
AEMSEAVEAAETYLRRLEDLSANVVELAVYLEAYIGGEIARHGDYSLRLK
LKIERLETIKSRVLETKGLGGIQDSSKAAQVELSSRTIGLLQSFDGEVVA
GHEEAKAVGGRLDVIWRESAERARDEAGHAHECALVAACRLWKAAAVEGT
RKRASTLDSVRLEWTRIQEVQDSTTSTMGVPSKVGRKEFARATGAEVRAG
EGDRERLRAVKDEAASDTEGGHQQASMAPVERGVTAAPAPIFPGRSRADH
DIELTPPMTTSPDITPVTDESTTVQTTEAEMVVDLDQSVKSAEVVDAVVV
DEGLVRGDSSVTSLNEYSSRRSGDGGLSRKGSLSAEHTTMASEESSIELV
VDESSSFVDVDAETEDDVSDPARVGLKFLDVFALLVEKVLFVGLPTLVSG
GSLVWQRVDNAVNGAKGRKGWKLLDRLKKDSAG*
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