prot_Ecto-sp13_S_contig19144.6110.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19144.6110.1
Unique Nameprot_Ecto-sp13_S_contig19144.6110.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19144.6110.1 vs. uniprot
Match: D7G1W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W5_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.040e-61
Identity = 142/153 (92.81%), Postives = 145/153 (94.77%), Query Frame = 0 
Query:    1 MNLDLDSQKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGKGGGRGGDRLTTIENISYVSENYRLSHSGEQDDLRVYKRVSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GVAKPPLRRRTLFGFLRRQ 151
            MNL LDSQK+DCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEG GGGRGGDRLTTIE+ISYVSENYRLSHSGEQDDLRVYKRVSPP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GV+K PLRRRT FGFLRRQ
Sbjct:    1 MNLHLDSQKRDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVSPPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVSKLPLRRRTFFGFLRRQ 153
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BLAST of mRNA_Ecto-sp13_S_contig19144.6110.1 vs. uniprot
Match: A0A6H5KTQ0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ0_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 2.030e-49
Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0 
Query:    9 KQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGKGGGRGGDRLTTIENISYVSENYRLSHSGEQDDLRVYKRVSPP 95
            KQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYS AACEGKGGGRGGDRL TIE ISYVSENYRLSHSGE+DDLRVYKRVSPP
Sbjct:  122 KQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSRAACEGKGGGRGGDRLPTIEVISYVSENYRLSHSGEEDDLRVYKRVSPP 208
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19144.6110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1W5_ECTSI2.040e-6192.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTQ0_9PHAE2.030e-4995.40Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19144contigEcto-sp13_S_contig19144:1372..2580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19144.6110.1mRNA_Ecto-sp13_S_contig19144.6110.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19144 1372..2580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19144.6110.1 ID=prot_Ecto-sp13_S_contig19144.6110.1|Name=mRNA_Ecto-sp13_S_contig19144.6110.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
MNLDLDSQKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAAC
EGKGGGRGGDRLTTIENISYVSENYRLSHSGEQDDLRVYKRVSPPPARGD
DTSAAMVGGAGGRKKAAGRAAAAAAVGAGGRRGVAKPPLRRRTLFGFLRR
Q*
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