prot_Ecto-sp13_S_contig19135.6103.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19135.6103.1
Unique Nameprot_Ecto-sp13_S_contig19135.6103.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length481
Homology
BLAST of mRNA_Ecto-sp13_S_contig19135.6103.1 vs. uniprot
Match: D8LDX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX6_ECTSI)

HSP 1 Score: 778 bits (2010), Expect = 2.920e-280
Identity = 417/478 (87.24%), Postives = 430/478 (89.96%), Query Frame = 0
Query:    1 NSKVLACLGRRAKVMRSRETTQLSLISTRAMANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFLQGAVERAARQHLLETNMNRMAIVTRFMSQMALKRRRNRAIKIIIGALSAFTNSNAIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTALLLKPPSKASLPLSRPGTAETTPATSTXXXXXXXXXXRKGAGGQGGQKKGRTRPKRQKSIVGREKKVENDTGGGGGQGSAGATLASMVPETAESKSAAPETASQPRRPPLYVSSEAKHREIFSWLRRTRAKHCRDVINYERFTVFPCMVELLLQHERRTYGTRLQAVKHVVALRSFGRLSRVWTEGGYFAKMSHVLPPPPRMPRVFTPEEGDEMFDRAAARSRTPSFTHAATSVLEGGSEAAAVSQPGETVGGTMPSEAVLIEVEAAVAXXXXXXXAGEAAVKAVLGRGSGA 478
            + +VL CLGRRAKVMRSRETTQLSLISTRAMANREMRTCKAERDRAFAELV+GRLFTRTGGIVRTWTAIIANIKRLLFLQGAVERAARQHLLE NMNRMAIVTRFMSQMALKRRRNRA+KIIIGALSAFTNSNAIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTA+L +PPSKASLP SRPGTAETTPATS           RKGAGGQGGQKKGRTRPKRQKS+VGREKKVENDTGGGGGQGSA ATLAS VPETA+S SA P+ A QPRRPP+YVSSEAKHREI SWL+RTRAKHCRDVINYERFT+FPCMVELLLQHERRTYGTRLQAVKHV+ALRSFGRLSRVWTEGGYFAKMSHVLPPP RMPRVFTPEEGDEM DRAAARS TPSFTHAA S LEGG EA    Q G   GGTMP EAVLIEVEAA         AGEAAVKAVLG GSGA
Sbjct:   71 HDQVLPCLGRRAKVMRSRETTQLSLISTRAMANREMRTCKAERDRAFAELVHGRLFTRTGGIVRTWTAIIANIKRLLFLQGAVERAARQHLLEANMNRMAIVTRFMSQMALKRRRNRAVKIIIGALSAFTNSNAIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTAML-RPPSKASLPPSRPGTAETTPATSNSPSSNKRPNRRKGAGGQGGQKKGRTRPKRQKSVVGREKKVENDTGGGGGQGSARATLASTVPETADSTSAPPKNALQPRRPPVYVSSEAKHREILSWLQRTRAKHCRDVINYERFTIFPCMVELLLQHERRTYGTRLQAVKHVIALRSFGRLSRVWTEGGYFAKMSHVLPPPSRMPRVFTPEEGDEMLDRAAARSTTPSFTHAAASFLEGGPEAHGAPQSGAAAGGTMPPEAVLIEVEAAATAAAEAARAGEAAVKAVLGSGSGA 547          
BLAST of mRNA_Ecto-sp13_S_contig19135.6103.1 vs. uniprot
Match: A0A6H5L2P4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P4_9PHAE)

HSP 1 Score: 642 bits (1655), Expect = 4.210e-228
Identity = 342/432 (79.17%), Postives = 365/432 (84.49%), Query Frame = 0
Query:   15 MRSRETTQLSLISTRAMANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFL------------------------QGAVERAARQHLLETNMNRMAIVTRFMSQMALKRRRNRAIKIIIGALSAFTNSNAIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTALLLKPPSKASLPLSRPGTAETTPATSTXXXXXXXXXXRKGAGGQGGQKKGRTRPKRQKSIVGREKKVENDTGGGGGQGSAGATLASMVPETAESKSAAPETASQPRRPPLYVSSEAKHREIFSWLRRTRAKHCRDVINYERFT---------------VFPCMVELLLQHERRTYGTRLQAVKHVVALRSFGRLSRVWTEGGYFAKMSHVLPPPPRMPRVFTPEEGDEMFDRAAAR 407
            MRSRETTQL LIST+A+ANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFL                        QGAVERAARQHLLE NMNRMAIVTRF+ QMALKRRRNRA+KI+IGALSAFT+S+AIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTT + L+PPS+ASLP S+PGTA+TTPATST          RKGAGGQGG KKGRTRPKRQKS+VGR+K+ +ND GGGGGQGSAGAT AS VPETAES SA  ETA Q RRPP+YVSSEAKHREIFSWL+RTRAKHCRD+INYERFT               +FPCMVELLLQHERRTYGTRLQAV+HV+ LRSFGRLSRVWTEGGYFAKMSH LPPPPRMPRVFTPEEGDEMFDRAA+R
Sbjct:    1 MRSRETTQLFLISTKALANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFLMPHIVHGADDNDISICLRSYDIVQQGAVERAARQHLLEANMNRMAIVTRFIGQMALKRRRNRAVKILIGALSAFTSSSAIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTGMPLRPPSEASLPPSQPGTAKTTPATSTSPSSNKRPNRRKGAGGQGGPKKGRTRPKRQKSVVGRKKQFQNDAGGGGGQGSAGATHASTVPETAESNSAPRETAPQRRRPPVYVSSEAKHREIFSWLQRTRAKHCRDIINYERFTPFSSLELPLNLKRTKIFPCMVELLLQHERRTYGTRLQAVRHVITLRSFGRLSRVWTEGGYFAKMSHALPPPPRMPRVFTPEEGDEMFDRAASR 432          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19135.6103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDX6_ECTSI2.920e-28087.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2P4_9PHAE4.210e-22879.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19135contigEcto-sp13_S_contig19135:615..3351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19135.6103.1mRNA_Ecto-sp13_S_contig19135.6103.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19135 615..3351 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19135.6103.1 ID=prot_Ecto-sp13_S_contig19135.6103.1|Name=mRNA_Ecto-sp13_S_contig19135.6103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=481bp
NSKVLACLGRRAKVMRSRETTQLSLISTRAMANREMRTCKAERDRAFAEL
VYGRLFTRTGGIVRTWTAIIANIKRLLFLQGAVERAARQHLLETNMNRMA
IVTRFMSQMALKRRRNRAIKIIIGALSAFTNSNAIGRYAQRVNWGTRHLQ
AVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTALLLKPPSKASLPLS
RPGTAETTPATSTSTSSNKRPNRRKGAGGQGGQKKGRTRPKRQKSIVGRE
KKVENDTGGGGGQGSAGATLASMVPETAESKSAAPETASQPRRPPLYVSS
EAKHREIFSWLRRTRAKHCRDVINYERFTVFPCMVELLLQHERRTYGTRL
QAVKHVVALRSFGRLSRVWTEGGYFAKMSHVLPPPPRMPRVFTPEEGDEM
FDRAAARSRTPSFTHAATSVLEGGSEAAAVSQPGETVGGTMPSEAVLIEV
EAAVAAAAAAATAGEAAVKAVLGRGSGAEL*
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