prot_Ecto-sp13_S_contig19116.6091.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19116.6091.1
Unique Nameprot_Ecto-sp13_S_contig19116.6091.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length393
Homology
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Match: A0A6H5JEL8_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL8_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 5.910e-109
Identity = 266/386 (68.91%), Postives = 282/386 (73.06%), Query Frame = 0
Query:    1 MKAWPKVTLWSRRSSKSSKSKTPSSEEPAQAEEIPVQVAHNNTILFVDGREGRYNFSRFGQTLAYGNQEKEEEKTTVDSSHRAYGAKELVSEEECRGEDCPNVRLLRKQELLRKSDQEELQKLRATLLQQKHDLQRNEKVASVRLKAVEDEKDALEVALGAETANTATQQKAMYTLRGENIEAQSVEMELRNQVETLKKEKSQAEKELDATLLQLKYDLERSEKVAVARLKEVEDEKDALEVALGAERANSAMQQKTIDCMKNTLREKTIEAQLLESELGEQVETLKKEKSKAAENGKRQTKEEKIRNGLARLVEKDLRKQVATLEQSIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLAQLQ 386
            MK   K+TLWSRRSSKSSKSK P S EPAQA+E PVQVAHN TILFVDGREG  NFSRFGQTLAY NQE+EEEKTTVDSSHRAYGAKE VS+EECRGE+CPNVRLLRKQELLRKSDQEE+QKLRATLLQQK+DLQRNEK+A                                                                                     +ARLK VEDEK ALEVALGAERAN+AMQQ T++ MKNTLREKTIEAQLLESELGEQVE LKKEKSKAAENG+RQTK+EKIR+GLARLVEKDLR QVATLEQSI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLAQ+Q
Sbjct:    1 MKTLHKLTLWSRRSSKSSKSKIPPSVEPAQADETPVQVAHN-TILFVDGREGSNNFSRFGQTLAYRNQEEEEEKTTVDSSHRAYGAKEFVSDEECRGEECPNVRLLRKQELLRKSDQEEIQKLRATLLQQKYDLQRNEKMA-------------------------------------------------------------------------------------LARLKAVEDEKAALEVALGAERANTAMQQITMNNMKNTLREKTIEAQLLESELGEQVEMLKKEKSKAAENGQRQTKQEKIRSGLARLVEKDLRTQVATLEQSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLAQVQ 300          
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Match: A0A6H5JCZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ5_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.170e-102
Identity = 200/256 (78.12%), Postives = 215/256 (83.98%), Query Frame = 0
Query:    1 MKAWPKVTLWSRRSSKSSKSKTPSSEEPAQAEEIPVQVAHNNTILFVDGREGRYN-FSRFGQTLAYGNQEKEEEKTTVDSSHRAYGAKELVSEEECRGEDCPNVRLLRKQELLRKSDQEELQKLRATLLQQKHDLQRNEKVASVRLKAVEDEKDALEVALGAETANTATQQKAMYTLRGENIEAQSVEMELRNQVETLKKEKSQAEKELDATLLQLKYDLERSEKVAVARLKEVEDEKDALEVALGAERANSAMQQ 255
            MKAW KVT WS RSSKSSKSKT  SEEPAQAEE PVQVA N   L V G E   N FSRFGQT AYGN E  EEKTTVD S+ AYGAKE VSEEECRGE+CPNVRL RK+E LR  DQEE+QKLRATLLQQK DLQRNEK+A  +LKAVEDEKDALEVALGAE AN  TQQK MYTL G+N+EAQSV+MELRNQVETLKK+KSQAEKE  ATLLQLK DL+R+EK+AVA+LK VEDEKDALEVALGAERA +AMQQ
Sbjct:    1 MKAWHKVTHWSWRSSKSSKSKTQPSEEPAQAEETPVQVARNTRTLLVHGHEKESNNFSRFGQTPAYGNHE--EEKTTVDPSYCAYGAKEFVSEEECRGEECPNVRLPRKKESLRTGDQEEIQKLRATLLQQKDDLQRNEKMAVAKLKAVEDEKDALEVALGAERANMVTQQKTMYTLGGKNVEAQSVDMELRNQVETLKKKKSQAEKEHRATLLQLKDDLQRNEKMAVAKLKAVEDEKDALEVALGAERAKTAMQQ 254          
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Match: D7FLK2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK2_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 5.270e-91
Identity = 222/247 (89.88%), Postives = 232/247 (93.93%), Query Frame = 0
Query:  140 VASVRLKAVEDEKDALEVALGAETANTATQQKAMYTLRGENIEAQSVEMELRNQVETLKKEKSQAEKELDATLLQLKYDLERSEKVAVARLKEVEDEKDALEVALGAERANSAMQQKTIDCMKNTLREKTIEAQLLESELGEQVETLKKEKSKAAENGKRQTKEEKIRNGLARLVEKDLRKQVATLEQSIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLAQLQ 386
            +A  RLKAVEDEK ALEVALGAE ANTATQQK MYTLRG+NIEAQSVEMELR+QVETLK+EKSQAEKEL ATLLQ KYDLERSEK+AV RLK VEDEK ALEVALGAERAN AMQQKTI+ MKNTLREK IEAQLLESELGEQVETLKKEKSKAAE+G+RQTKE+KIRNGLARLVEKDLRKQVATL+QSIK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLL QLQ
Sbjct:    1 MALARLKAVEDEKAALEVALGAERANTATQQKTMYTLRGKNIEAQSVEMELRSQVETLKQEKSQAEKELRATLLQWKYDLERSEKMAVDRLKVVEDEKAALEVALGAERANMAMQQKTINYMKNTLREKNIEAQLLESELGEQVETLKKEKSKAAEDGQRQTKEDKIRNGLARLVEKDLRKQVATLKQSIKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLVQLQ 247          
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Match: D7G7H4_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H4_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 3.180e-32
Identity = 129/329 (39.21%), Postives = 163/329 (49.54%), Query Frame = 0
Query:    1 MKAWPKVTLWSRRSSKSSKSKTPSSEEPAQAEEIPVQVAHNNTILFVDGREGRYNFSRFGQTLAYGNQEKEEEKTTVDSSHRAYGAKELVSEEECRGEDCPNVRLLRKQE-LLRKSDQEELQKLRATLLQQKHDLQRNEKVASVRLKAVEDEKDALEVALGAETANTATQQKAMYTLRGENIEAQSVEMELRNQVETLKKEKSQAEKELDATLLQLKYDLERSEKVAVARLKEVEDEKDALEVALGAERANSAMQQKTIDCMKNTLREKTIEAQLLESELGEQVETLKKEKSKAAENGKRQTKEEKIRNGLARLVEKDLRKQVATLEQS 328
            MKA  +VT W  RSS SSKS T S EEP QA++          +  +DG     N    GQ    G+QE EE  T VD+   +YG  +L++E++  GED  + RLL KQE L+R SD+EE+Q+L A+LLQ  +D +R+E++A+ RLKAVE EK ALEVA+ AE A TA QQK M+ LR  +IEAQSVE +LRN+++TLK EKSQ                                                                                            NG   TKEEK+R GLARLVEKDLRK+VA LEQS
Sbjct:    1 MKALHRVTRWRWRSSTSSKSNT-SPEEPEQAKDALA-------VRSLDG-----NRPPVGQLEPNGHQEGEE--TKVDAPGHSYGPNQLIAEDQRHGEDNADERLLSKQEELVRNSDKEEIQELCASLLQLHNDRRRSEEIAAARLKAVEGEKAALEVAIQAERAKTAMQQKTMHFLRQISIEAQSVETQLRNELQTLKNEKSQGT------------------------------------------------------------------------------------------NGHSDTKEEKMRRGLARLVEKDLRKRVAVLEQS 224          
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Match: D7G7H5_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.400e-21
Identity = 72/121 (59.50%), Postives = 89/121 (73.55%), Query Frame = 0
Query:  207 ELDATLLQLKYDLERSEKVAVARLKEVEDEKDALEVALGAERANSAMQQKTIDCMKNTLREKTIEAQLLESELGEQVETLKKEKSKAAENGKRQTKEEKIRNGLARLVEKDLRKQVATLEQ 327
            EL A+LL+L  +L RSE++A ARLK VEDEK ALEVAL  ERA +AMQ+KT+    + LR+  I+AQ +E EL  Q+ETL+KEK      G   TKE+KIR+GLARLVE DL+KQVATL Q
Sbjct:    4 ELHASLLKLHDNLRRSEEMAAARLKAVEDEKAALEVALREERAKTAMQEKTM----HFLRQTNIQAQSVEIELRNQMETLQKEKKS---QGLSHTKEQKIRSGLARLVENDLQKQVATLAQ 117          
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Match: A0A6H5JJM5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM5_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 3.310e-20
Identity = 102/236 (43.22%), Postives = 129/236 (54.66%), Query Frame = 0
Query:    1 MKAWPKVTLWSRRSSKSSKSKTPSSEEPAQAEEIP---VQVAHNNTILFVDGREGRYNFSRFGQTLAYGNQEKEEEKTTVDSSHRAYGAKELVSEEECRGEDCPNVRLLRKQE-LLRKSDQEEL-QKLRATLLQQKHDL-QRNEKVASVRLKAVEDEKDALEVALGAETANTATQQKAMYTLRGENIEAQSVEME---------------LRNQVETLKKEKSQAEKELDATLLQL 215
            MKAW ++T W   SSK S +KTP  E  AQAEE      + A  + ILF     G     R GQ    GN E  EEKT VD S ++YG KE        GED  + RLLRK E L+R  ++EE+ + L  +LL+  HD+ +R+E++A+ RLKAVEDEK A EVA   E A T  Q+K M+ LR  NI+AQSVEM                LR QV TL +  SQ   E+ +   QL
Sbjct:    1 MKAWQRMTHWRWCSSKWSTAKTPPQEGSAQAEEXXXXXAKAAAAHMILFAGELGGI--LPRVGQVQPDGNGE--EEKTKVDPSRQSYGPKESP------GEDPVDERLLRKHEGLVRTGNEEEMIEGLHVSLLKL-HDIPRRSEEMAAARLKAVEDEKAAFEVAKREEKAKTTMQEKTMHFLRRTNIQAQSVEMSCEIRWSGLALLVEKNLRKQVATLTQSLSQQAGEIRSLSTQL 225          
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Match: D7G7H6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7H6_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 9.000e-20
Identity = 117/331 (35.35%), Postives = 140/331 (42.30%), Query Frame = 0
Query:    1 MKAWPKVTLWSRRSSKSSKSKTPSSEEPAQAEEIPVQVAHNNT---ILFVDGREGRYNFSRFGQTLAYGNQEKEEEKTTVDSSHRAYGAKELVSEEECRGEDCPNVRLLRKQELLRKSDQEELQKLRATLLQQKHDLQRNEKVASVRLKAVEDEKDALEVALGAETANTATQQKAMYTLRGENIEAQSVEMELRNQVETLKKEKSQAEKELDATLLQLKYDLERSEKVAVARLKEVEDEKDALEVALGAERANSAMQQKTIDCMKNTLREKTIEAQLLESELGEQVETLKKEKSKAAENGKRQTKEEKIRNGLARLVEKDLRKQVATLEQS 328
            MK W K T W RR SK S+ ++P    P Q+      V ++N+   +  V   +G  N SR G+     NQE+EEE T VD S  +YGA   V+EE+ RG D  + RLLRKQEL+R                                     EK ALEVAL AE A TA QQK M+ LR  NIEAQS+E ELR+QVETLK                                           +A G                                  GE               G+ QTKEEK+R+GLARLVEKDLRKQVATLEQS
Sbjct:    1 MKLWHKATRWRRRGSKCSELESPLPRAPVQS------VGNHNSKSIVWLVSELDG--NTSRIGENQPDVNQEEEEE-TKVDPSRHSYGAMGFVAEEQRRGGDNADERLLRKQELVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAALEVALLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLK-------------------------------------------IASGH---------------------------------GE---------------GRFQTKEEKVRSGLARLVEKDLRKQVATLEQS 231          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19116.6091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JEL8_9PHAE5.910e-10968.91PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JCZ5_9PHAE1.170e-10278.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLK2_ECTSI5.270e-9189.88PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7G7H4_ECTSI3.180e-3239.21PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7G7H5_ECTSI6.400e-2159.50PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JJM5_9PHAE3.310e-2043.22PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7G7H6_ECTSI9.000e-2035.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 315..342
NoneNo IPR availableCOILSCoilCoilcoord: 180..214
NoneNo IPR availableCOILSCoilCoilcoord: 357..384
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availableCOILSCoilCoilcoord: 230..250
NoneNo IPR availableCOILSCoilCoilcoord: 258..296
NoneNo IPR availableCOILSCoilCoilcoord: 106..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19116contigEcto-sp13_S_contig19116:683..2323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19116.6091.1mRNA_Ecto-sp13_S_contig19116.6091.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19116 2..2377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19116.6091.1 ID=prot_Ecto-sp13_S_contig19116.6091.1|Name=mRNA_Ecto-sp13_S_contig19116.6091.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=393bp
MKAWPKVTLWSRRSSKSSKSKTPSSEEPAQAEEIPVQVAHNNTILFVDGR
EGRYNFSRFGQTLAYGNQEKEEEKTTVDSSHRAYGAKELVSEEECRGEDC
PNVRLLRKQELLRKSDQEELQKLRATLLQQKHDLQRNEKVASVRLKAVED
EKDALEVALGAETANTATQQKAMYTLRGENIEAQSVEMELRNQVETLKKE
KSQAEKELDATLLQLKYDLERSEKVAVARLKEVEDEKDALEVALGAERAN
SAMQQKTIDCMKNTLREKTIEAQLLESELGEQVETLKKEKSKAAENGKRQ
TKEEKIRNGLARLVEKDLRKQVATLEQSIKELSQAAEDGQRQTKEEKVRN
GLTRLVEKDLRKQVASLEQSRRQQADEIRNLLAQLQHNGVAR*
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