prot_Ecto-sp13_S_contig1910.6085.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1910.6085.1
Unique Nameprot_Ecto-sp13_S_contig1910.6085.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1932
Homology
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: D8LLI4_ECTSI (SEN1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI4_ECTSI)

HSP 1 Score: 2195 bits (5687), Expect = 0.000e+0
Identity = 1309/1573 (83.22%), Postives = 1347/1573 (85.63%), Query Frame = 0
Query:    1 AQVTSSGEGVFSGEEWNQHWPGVLTLLVHREASARAWAQSMARRAGGIRAKEYVEVLSPVIDRWVPVLERGLSSGGAHPTASGSDQDGDEEQLHWSGLHVALQLLEPSAAPLLAYGFPTLVDLALQKFDDGPGPRGVSLYLQVCGCLSALLRLLGAEMWEYSSRLPSEVLEAFERQTSYGDGADTADFRGTGRRTPPNEAIQKKVFEMLPLLVSSASAVDRLSGGTGVGTAVYGNQEVGGEADRPG----------AAAGVLPVADAALSFLSREIVLLSAVAPEANRGAHGRRKLALAKAVLGVLENCYDGSAGGGASDDDYDSDVLGPESWPWNAAAASDAAAA--ASGAWCHASWPVRSLPSWGPRLADIAGDRSGRASGERNGSTAVAVVDRAARVVQLVLREHAGAAWRAALSALRPLPSASSXXXXXASQSSGRMEDDECVVPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPCGMT-----ERDFSPENSCL------GQVQFFVKLFVPYVQGLTEIVKNRGASVSPALLPQVAPSILQQALLAAIPAARAALEELVSRSVFSDGGRRGDLRPLLGRFPPDCARACFQAVPQALGAMAAAGPHLSLKSWSPLFQAVGVLGCAVLLPEASAGDXXXXXXXXXXXXE--EGELWEVLEAVWEFIFLQVIPEVLPALREQHATRLEEAFRALFGSLESLWPLLTGPVAQRRRPRLADGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASSCSSAASGGDDRGARGDDDPSVGVSPRKTVRLVGDKLCAVEGDGGSAWALSSGDPGETDLLAVLKSAAAAASTEGTAVDPCSPPAAPGGAXXXXXXXXXXEAPRNPFALSAARRGNGGSSATNGWSRTPWEDRLGVRDSATPSLESAGRSLSGSALAQVTYSSPAAAPEPTVRTRGVILGSHHPRAGGNDFSQARQGXXXXXXXXXXXXXXXXXXFRDSRGRSTTASTEGGSLGVRPEKTASRAVSNSTANDDDEVGSSSGARGKKTYVTAAEAAXXXXXXXXXXXXXXXXXXXX----RSRGSVVERWREMQRMQVRETTEAVASAPAASQSRSLXXXXXXXXXXXXXXXXXXPRNAAAQTTSKEARAAFATAAQAAARRGDSPDGGNGSLATTVAGAATLDYASLAEASATELHKLVLSSWTVPDLFAASTKSARSGGRLHGPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXXXPPEAMTLRVASLVEGGKGGFGHVTMVADDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANTTACLGLFDKEPRGTARGPAGMPGSGRSSVRAKVLFRSTTPGDRGRDRSTIERGAGAVIPKKATAESRGQGQGEEEAASAVLRAFREPGSQVRVTRLEGLSTSTREFVALEASPRVALLHHILQATSEPSLQPLPETPQRAPGNSTTSNNNLWATKLAPPYLVDEASFTDACKRLSSVEDSVLLGKSGAGSGSPATAAGLAADIAGPAESLMRSLRCLASFR 1544
            +QVTSSGEGVFSGEEWNQHWPGVLTLLVHREAS RAWAQSMARRAGGIRAKEYVEVLSPVIDRWVPVLERGLSSGGAHPTASGSD D D E+LHWSGLHVALQLLEPSAAPLLAYGFPTLVDLALQKFDDGPGPRGVSLYLQVCGCLSALLRLLGAEMWEYSSR PSEVLEA ERQTSYGDGADTADFRGTGRR  PNEAIQKKVFEMLPLLVSSA+AVDR SG TG GTAVYGNQ +GG  D PG          AAAGVLPVADA LSFLSREI  LSAVAPE NRGAHGRR++ALAKA+LGVLE CY+GSAGGG SDDD  SD+L PESWPWNA            SGAWC+ SWPVRS+PSWGPRLADIAGDRSGRASGE   STAVAVVDRAARVVQLVLREH GAAWRAALSALR  PSASS     ASQSSGRMED+ECVVPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPCG +     E    P  S +      G +  FV+LFVPYVQGLTEIVKNRGA                  LLAA+P ARAALEELVSRSVFSDGGRRGDLRPLLGRFPPDCARACFQAVPQALGAMAAAGPHLSLKSWSPLFQAVGVLGCAVLLP+ASA D XXXXXXXXXXX   E ELWEVLEAVWEFIFLQVIPE LPALREQHATRLEEAFRALFGSLESLWPLLTGP AQRRRPRL DGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASSC SAA GGD+RGARGDDDPSVGVSPRKTVRLVGDKL AVEG+G SAWALSS +P E DLLA LKSAA AA+ +GTAVDPCSPPAA GGA XXXXXXXXX APRNPFALSAARRGNGGSSA +GWSRTPWEDRLGV +SATPS ESAGR LS SALAQ+TYSSPAAAPE T RT G+  GSH+P+AGGND          XXXXXXXXXXXXXXXFRDSRGRST ASTEGGSLGVRPEKTASRAVSNSTANDDDEVGSSSGARG+KTYVTAAEAAXXXXXXXXXXXXXXXXXXXX    R RGSVVERWREMQR Q+ ETTE VASAPAASQSRSLXXXXXXXXXXXXXXXXXX                          RGDSPDGGNGSLATTVAGAATLDYASLAEASATELHKLVLSSWTVP+LFAASTKSARSGGR  GPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXXXPPEAMTLRVASLVEGGKGGFGH+TMVADDG                                     A TTACLGLF+KEPRG ARGPAGMPGSGRSSVRAKVLFRST PGDRGR+RSTIERGAGA+IPKKATAESRGQGQGEEEAASAVLRAFRE GSQVRVTRLEGLSTSTREFVALEASPR ALLHHILQATSEPSLQPL ETPQRAPGNSTTSN+NLWATKLAPPYLVDEASF DACKRLSSVEDS LLG+SGAG GSPA AAGLAADIAGPAESLMRSL CLASFR
Sbjct:  292 SQVTSSGEGVFSGEEWNQHWPGVLTLLVHREASTRAWAQSMARRAGGIRAKEYVEVLSPVIDRWVPVLERGLSSGGAHPTASGSDPDSDGERLHWSGLHVALQLLEPSAAPLLAYGFPTLVDLALQKFDDGPGPRGVSLYLQVCGCLSALLRLLGAEMWEYSSRQPSEVLEALERQTSYGDGADTADFRGTGRRMLPNEAIQKKVFEMLPLLVSSAAAVDRPSGATGWGTAVYGNQGIGGGTDHPGVAARHIDDAAAAAGVLPVADAVLSFLSREIASLSAVAPENNRGAHGRRQMALAKALLGVLETCYNGSAGGGESDDD--SDLLEPESWPWNAXXXXXXXXXXXTSGAWCYPSWPVRSVPSWGPRLADIAGDRSGRASGE---STAVAVVDRAARVVQLVLREHGGAAWRAALSALRLPPSASSSGSGSASQSSGRMEDEECVVPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPCGHSAIRAAEGRGGPAASRVLAALHSGMMSQFVRLFVPYVQGLTEIVKNRGA------------------LLAAVPTARAALEELVSRSVFSDGGRRGDLRPLLGRFPPDCARACFQAVPQALGAMAAAGPHLSLKSWSPLFQAVGVLGCAVLLPKASAADGXXXXXXXXXXXXXXEDELWEVLEAVWEFIFLQVIPEALPALREQHATRLEEAFRALFGSLESLWPLLTGPAAQRRRPRLTDGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASSCGSAAGGGDERGARGDDDPSVGVSPRKTVRLVGDKLRAVEGEGRSAWALSSEEP-EADLLAALKSAAVAATAKGTAVDPCSPPAATGGAAXXXXXXXXXAAPRNPFALSAARRGNGGSSAASGWSRTPWEDRLGVGNSATPSSESAGRPLSESALAQITYSSPAAAPERTARTPGLRRGSHYPKAGGNDXXXXXX----XXXXXXXXXXXXXXXFRDSRGRSTAASTEGGSLGVRPEKTASRAVSNSTANDDDEVGSSSGARGRKTYVTAAEAAXXXXXXXXXXXXXXXXXXXXXXXARPRGSVVERWREMQRRQMGETTEVVASAPAASQSRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RGDSPDGGNGSLATTVAGAATLDYASLAEASATELHKLVLSSWTVPELFAASTKSARSGGRFQGPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXXXPPEAMTLRVASLVEGGKGGFGHITMVADDGGGSSHRFAHDDVLLLSLAKPSDGAVGGGHVSGDGGSAATTTACLGLFEKEPRGAARGPAGMPGSGRSSVRAKVLFRSTAPGDRGRNRSTIERGAGAIIPKKATAESRGQGQGEEEAASAVLRAFRELGSQVRVTRLEGLSTSTREFVALEASPRAALLHHILQATSEPSLQPLQETPQRAPGNSTTSNDNLWATKLAPPYLVDEASFADACKRLSSVEDSALLGESGAGGGSPAIAAGLAADIAGPAESLMRSLGCLASFR 1827          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: A0A6H5J5S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5S7_9PHAE)

HSP 1 Score: 1562 bits (4044), Expect = 0.000e+0
Identity = 956/1162 (82.27%), Postives = 970/1162 (83.48%), Query Frame = 0
Query:  158 MWEYSSRLPSEVLEAFERQTSYGDGADTADFRGTGRRTPPNEAIQKKVFEMLPLLVSSASAVDRLSGGTGVGTAVYGNQEVGGEADRPGAAA----------GVLPVADAALSFLSREIVLLSAVAPEANRGAHGRRKLALAKAVLGVLENCYDGSAGGGASDDDYDSDVLGPESWPWNAAAASDAAAAA-SGAWCHASWPVRSLPSWGPRLADIAGDRSGRASGER--NGSTAVAVVDRAARVVQLVLREHAGAAWRAALSALRPLPSASSXXXXXASQSSGRMEDDECVVPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPCG-----MTERDFSPENSCL------GQVQFFVKLFVPYVQGLTEIVKNRGASVSPALLPQVAPSILQQALLAAIPAARAALEELVSRSVFSDGGRRGDLRPLLGRFPPDCARACFQAVPQALGAMAAAGPHLSLKSWSPLFQAVGVLGCAVLLPEASAGDXXXXXXXXXXXX-------EEGELWEVLEAVWEFIFLQVIPEVLPALREQHATRLEEAFRALFGSLESLWPLLTGPVAQRRRPRLADGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASSCSSAASGGDDRGARGDDDPSVGVSPRKTVRLVGDKLCAVEGDGGSAWALSSGDPGETDLLAVLKSAAAAASTEGTAVDPCSPPAAPGGAXXXXXXXXXXEAPRNPFALSAARRGNGGSSATNGWSRTPWEDRLGVRDSATPSLESAGRSLSGSALAQVTYSSPAAAPEPTVRTRGVILGSHHPRAGGNDFSQARQGXXXXXXXXXXXXXXXXXXFRDSRGRSTTASTEGGSLGVRPEKTASRAVSNSTANDDDEVGSSSGARGKKTYVTAAEAAXXXXXXXXXXXXXXXXXXXX-----RSRGSVVERWREMQRMQVRETTEAVASAPAASQSRSLXXXXXXXXXXXXXXXXXXPRNAAAQTTSKEARAAFATAAQAAARRGDSPDGGNGSLATTVAGAATLDYASLAEASATELHKLVLSSWTVPDLFAASTKSARSGGRLHGPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXXXPPEAMTLRVASLVEGGKGGFGHVTMVADDG 1283
            MWEYSSR PSEVLEA ERQTSYGDGADTADFRGTGRR PPNEAIQKKVFEMLPLLVSSASAVDR SGGTGVGTAVYGNQEVGGEAD PGAAA           VLPVADAALSFLSREI  LSAVAPEA RGAHGRRKLALAKAVLGVLENCYDGSAGGGASDDDYDSDVLGPESWPWNAAA         SGAW H SWPVRSLP                       NGSTAVAVVDRAARVVQLVLREHAGAAWR ALSALRPLPSASSXXXXXASQSSGRMEDDECVVPLCGPLLERICLELPLMDLPVRVHAAVFE HGWLSLLPCG       E    P  S +      G +  FVKLFVPYVQGLTEIVKNRG          VAPSILQ ALLA IPAARAALEELVSRSVFSDGGRRGDLR LLGRFPPDCARACFQAVPQALGAMAAAGPH SLKSWSPLFQAVGVLGCAVLLPEASAGDXXXXXXXXXXXX       EE ELWEVLEAVWEFIFLQV                             LWPLLTGPVAQRRRPRLADGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASSCSSAA+GGDDRGA GDDDPSVGVSPRKT+RLVGDKLCAVEGDGGSAWALSSGDP E DLLAVLKSAAAAA+TEGTAVDPCSPPAAP GA          EAPRNPFALSAARRGNGGSSA +GWSRTPWEDRLG R+SATPSLESAGR LSGSALAQVTYSSPAAAPEPTVRT GVILGSH+PRAGGNDFSQAR+G        XXX       FRDSRGRSTTASTEGGSLGVRPEKTASRAVSN TAN+D E+GSSSGAR +KTYVTAAEAA        XXXXXXXXXXXX     R RGSVVERWREMQR QV ETTE VASAPAASQSRSLXXXXXXXXXXXXXXX   PRNAA QTTSKEARAAFATAAQAAARRGDSPDGGNGSLA T A AATLDYASLAEASATELHKLVLSSWTVP+LFAASTKSARSGGR  GPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXX PPEAMTLRVASLVEGGKGGFGHVT+VADDG
Sbjct:    1 MWEYSSRQPSEVLEALERQTSYGDGADTADFRGTGRRMPPNEAIQKKVFEMLPLLVSSASAVDRPSGGTGVGTAVYGNQEVGGEADHPGAAARRVDDAAAAASVLPVADAALSFLSREIASLSAVAPEARRGAHGRRKLALAKAVLGVLENCYDGSAGGGASDDDYDSDVLGPESWPWNAAAXXXXXXXXXSGAWYHPSWPVRSLPXXXXXXXXXXXXXXXXXXXXXXXNGSTAVAVVDRAARVVQLVLREHAGAAWRVALSALRPLPSASSXXXXXASQSSGRMEDDECVVPLCGPLLERICLELPLMDLPVRVHAAVFEVHGWLSLLPCGDSAIRAAEGRGGPAASRVLAALHSGTMSQFVKLFVPYVQGLTEIVKNRG----------VAPSILQ-ALLATIPAARAALEELVSRSVFSDGGRRGDLRLLLGRFPPDCARACFQAVPQALGAMAAAGPHFSLKSWSPLFQAVGVLGCAVLLPEASAGDXXXXXXXXXXXXXXXXXXWEECELWEVLEAVWEFIFLQV---------------------------GYLWPLLTGPVAQRRRPRLADGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASSCSSAANGGDDRGACGDDDPSVGVSPRKTIRLVGDKLCAVEGDGGSAWALSSGDPEEADLLAVLKSAAAAATTEGTAVDPCSPPAAPRGAARSRVDPHSPEAPRNPFALSAARRGNGGSSAASGWSRTPWEDRLGARNSATPSLESAGRPLSGSALAQVTYSSPAAAPEPTVRTPGVILGSHYPRAGGNDFSQAREGGGSTAGDGXXXG------FRDSRGRSTTASTEGGSLGVRPEKTASRAVSNWTANEDGELGSSSGARSRKTYVTAAEAAAARVSEAKXXXXXXXXXXXXXXXXARPRGSVVERWREMQRRQVGETTEVVASAPAASQSRSLXXXXXXXXXXXXXXXRS-PRNAAVQTTSKEARAAFATAAQAAARRGDSPDGGNGSLAITAARAATLDYASLAEASATELHKLVLSSWTVPELFAASTKSARSGGRFQGPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXXGPPEAMTLRVASLVEGGKGGFGHVTLVADDG 1117          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: A0A6H5J6B2_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6B2_9PHAE)

HSP 1 Score: 701 bits (1809), Expect = 7.010e-231
Identity = 417/490 (85.10%), Postives = 428/490 (87.35%), Query Frame = 0
Query: 1444 ILQATSEPSLQPLPETPQRAPGNSTTSNNNLWATKLAPPYLVDEASFTDACKRLSSVEDSVLLGKSGAGSGSPATAAGLAADIAGPAESLMRSLRCLASFRVAPELLSSHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGGGATAKGKAGTKRSQDEXXXXXXXXXXXXXXXSEGGAKAKVEAEQFVERVRPAAATKPRLVGEKEQGEENDEXXXXXXS-GHKSRSSIPDAGSXXXDISSKDTCPPGKQQKKRQETPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAHEDLTAAARGNDVPATPETAVLAERRAPVNHVAATANRREGGAXXXXXXXXVV-LLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEER 1931
            + QATSEPSLQPLPET QRAPGNSTTSNN LWATKLAPPYLVDEASFTDACKRLSSVEDS LLGKSGAG GSPATAAGLAADIAGP ESLMRSL CLASFRVAPELL+SHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGGGATA  KA TKRSQDE        XXXXXXX  GGAKAKV AEQ V+RVRPAA+TKPRLVGEKEQ      XXX   S GHKS + +PDAGS   D S K TCPP KQQK++Q+TPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAHEDL AAARGND PATPETAVLAERRAPVNH A          XXXXXXXX   LLQGPPGTGKTRTVLGVVSA+LARREEKD AS GG SGASARGMGTTLAP ARQKRPGVAGRWVAAKTHQR+LVCAPSNGAVDELAQRLALESGGVWDQRGNA APRVVRLGKPSEDAADRVKAVSLEFMVEER
Sbjct:    2 VAQATSEPSLQPLPETAQRAPGNSTTSNN-LWATKLAPPYLVDEASFTDACKRLSSVEDSALLGKSGAGGGSPATAAGLAADIAGPEESLMRSLGCLASFRVAPELLTSHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGGGATAYSKAATKRSQDEERGGAGSGXXXXXXXX-GGAKAKVGAEQIVDRVRPAASTKPRLVGEKEQXXXXXXXXXGISSSGHKSPAPMPDAGSSSSDFSPKVTCPPEKQQKEQQQTPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAHEDLAAAARGNDGPATPETAVLAERRAPVNHAAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEKDCASGGGRSGASARGMGTTLAPEARQKRPGVAGRWVAAKTHQRVLVCAPSNGAVDELAQRLALESGGVWDQRGNATAPRVVRLGKPSEDAADRVKAVSLEFMVEER 489          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 1.710e-119
Identity = 244/294 (82.99%), Postives = 250/294 (85.03%), Query Frame = 0
Query: 1638 FVERVRPAAATKPRLVGEKEQGEENDEXXXXXXSGHKSRSSIPDAGSXXXDISSKDTCPPGKQQKKRQETPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAHEDLTAAARGNDVPATPETAVLAERRAPVNHVAATANRREGGAXXXXXXXXVVLLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEER 1931
             VERVRPAA+TKPRLVGEKEQ E+NDE      SGHKS ++IPDAGS   D+S KDTCPP KQQKKRQETPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREA EDL AAAR ND  ATPE AVLAERRAPVNH            XXXXXXXX  LLQGPPGTGKTRTVLGVVSA+LARREEKD  S        ARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEER
Sbjct:    1 MVERVRPAASTKPRLVGEKEQEEKNDEQQGISDSGHKSPATIPDAGSSSSDVSPKDTCPPEKQQKKRQETPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAQEDLAAAARDNDGRATPEAAVLAERRAPVNHAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEKDCGSXXXXXXXGARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEER 294          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: W7TPV4_9STRA (Helicase sen1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPV4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.440e-11
Identity = 72/223 (32.29%), Postives = 95/223 (42.60%), Query Frame = 0
Query: 1711 PSLVPAALWDRLSQEFNVSQLRAIWAAA-ASAREAHEDLTAAARGNDVPATPETAVLAERRAPVNHVAATANRREGGAXXXXXXXXVVLLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGARQKRPGVAGRWVAAKTHQR---ILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVE 1929
            PS VP  LW  L Q+FN  QL+AI A+   +A+  H+                                                 V LLQGPPGTGKTR ++G++SA++  R    +  S            T + P  R          V  + HQR   ILVCAPSNGA+DE+  RL  +  G+ +  G    P +VRLG    DA + VK VSLE  +E
Sbjct: 1933 PSHVPLKLWKSLQQQFNAPQLKAISASCFINAQAVHQGCE----------------------------------------------VTLLQGPPGTGKTRCIMGLLSAIMHSRPTSTYYPSHSA---------TNVRPALR----------VGYRHHQREARILVCAPSNGAIDEITMRL--QRTGLLNAEGQVFKPTLVRLGVVDPDAEEEVKTVSLESQLE 2088          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: A0A1E3PY24_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3PY24_LIPST)

HSP 1 Score: 77.0 bits (188), Expect = 4.460e-10
Identity = 55/132 (41.67%), Postives = 73/132 (55.30%), Query Frame = 0
Query: 1798 LLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVE 1929
            L+QGPPGTGKT+T+LG++ A L   +               RG+   + PG RQ     A   V  K   RILVCAPSN AVDEL  RL    GG+W+  G    PR+VRLG+ S+     V+ ++LE +V+
Sbjct: 1450 LIQGPPGTGKTKTILGIIGATLTTTKS--------------RGIPIQI-PGQRQSGQQQASVTVEPK---RILVCAPSNAAVDELVLRL---KGGIWNSSGEIFFPRIVRLGR-SDIINPAVRDLTLEELVD 1559          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: A0A023B1U2_GRENI (AAA domain protein n=1 Tax=Gregarina niphandrodes TaxID=110365 RepID=A0A023B1U2_GRENI)

HSP 1 Score: 76.6 bits (187), Expect = 6.060e-10
Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 0
Query: 1796 VVLLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGARQKRPGVAGRWVAAKTHQ-----RILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMV 1928
            V LLQGPPGTGKT+T+L +++A+   R           SG SA G G     GA Q RP   G              R+LVCAPSN AVDE+A R+     G+  Q G+   P+  R+G PS    + VK +SLE ++
Sbjct: 1826 VALLQGPPGTGKTKTLLSILAAIFMAR-----------SGGSAPGHG-----GAEQSRPTSRGXXXXXXXXXXXXXXRVLVCAPSNAAVDEIAGRVLAV--GLPGQHGHVFHPKCFRIGNPSRITREEVKEISLELLL 1945          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: W6MFA3_9ASCO (UvrD-like helicase ATP-binding domain-containing protein n=1 Tax=Kuraishia capsulata CBS 1993 TaxID=1382522 RepID=W6MFA3_9ASCO)

HSP 1 Score: 75.9 bits (185), Expect = 1.010e-9
Identity = 52/132 (39.39%), Postives = 68/132 (51.52%), Query Frame = 0
Query: 1798 LLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVE 1929
            L+QGPPGTGKT+T+LG++   +     +                 T   PG  Q R         A +  +ILVCAPSN AVDEL  RL     G+ D +G    PRVVRLG+ S+   D VK ++LE+ VE
Sbjct: 1294 LIQGPPGTGKTKTILGIIGHAITSSALQSR---------------TIAIPGMEQTR---------APSASKILVCAPSNAAVDELVLRLR---SGIRDSKGALYRPRVVRLGR-SDAILDAVKDMTLEYQVE 1397          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: A0A1S8W6T1_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W6T1_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 2.190e-9
Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = 0
Query: 1797 VLLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEER 1931
            VL+QGPPGTGKT+T+LG++ A+   R     +    G G S     +   P   Q  P +        +  R+L CAPSN A+DE+A+RL     G+ D +GN   P +VR+G  +  A   +K+V+L+++VEER
Sbjct: 1346 VLIQGPPGTGKTKTILGLIGAM--HRTSTAISLPKNGDGPSDALRASLSVPRTHQNGPSM--------SKGRLLCCAPSNAAIDEIARRLIT---GILDLKGNIYKPNIVRVGTSAIHAD--IKSVTLDYLVEER 1465          
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Match: C5DFK5_LACTC (KLTH0D15862p n=2 Tax=Lachancea TaxID=300275 RepID=C5DFK5_LACTC)

HSP 1 Score: 74.7 bits (182), Expect = 2.270e-9
Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 0
Query: 1798 LLQGPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGA-RQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADR-VKAVSLEFMVEER 1931
            L+QGPPGTGKT+T+LG+V   L+ ++                     L PG  +Q    VA         Q++L+CAPSN AVDEL  RL L   GV+D+ G    P++VR+G+P  DA +  ++ ++LE  VE+R
Sbjct: 1332 LIQGPPGTGKTKTILGIVGYTLSTQK--------------------ALPPGVIKQPLDAVASSTEQLLLKQKVLICAPSNAAVDELVLRLKL---GVFDKSGRLFQPKLVRIGRP--DAVNAAIRDLTLEEQVEKR 1442          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1910.6085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLI4_ECTSI0.000e+083.22SEN1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5J5S7_9PHAE0.000e+082.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6B2_9PHAE7.010e-23185.10AAA_11 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LLI3_ECTSI1.710e-11982.99Presumed helicase required for RNA polymerase II t... [more]
W7TPV4_9STRA1.440e-1132.29Helicase sen1 n=3 Tax=Nannochloropsis gaditana Tax... [more]
A0A1E3PY24_LIPST4.460e-1041.67Uncharacterized protein n=1 Tax=Lipomyces starkeyi... [more]
A0A023B1U2_GRENI6.060e-1039.86AAA domain protein n=1 Tax=Gregarina niphandrodes ... [more]
W6MFA3_9ASCO1.010e-939.39UvrD-like helicase ATP-binding domain-containing p... [more]
A0A1S8W6T1_9FUNG2.190e-937.78Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
C5DFK5_LACTC2.270e-938.24KLTH0D15862p n=2 Tax=Lachancea TaxID=300275 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1074..1098
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 1015..1913
NoneNo IPR availablePANTHERPTHR10887:SF382HELICASE SENATAXIN-RELATEDcoord: 1015..1913
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 1794..1931
e-value: 5.5E-22
score: 78.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1793..1893

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1910contigEcto-sp13_S_contig1910:465..15244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1910.6085.1mRNA_Ecto-sp13_S_contig1910.6085.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1910 465..15244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1910.6085.1 ID=prot_Ecto-sp13_S_contig1910.6085.1|Name=mRNA_Ecto-sp13_S_contig1910.6085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1932bp
AQVTSSGEGVFSGEEWNQHWPGVLTLLVHREASARAWAQSMARRAGGIRA
KEYVEVLSPVIDRWVPVLERGLSSGGAHPTASGSDQDGDEEQLHWSGLHV
ALQLLEPSAAPLLAYGFPTLVDLALQKFDDGPGPRGVSLYLQVCGCLSAL
LRLLGAEMWEYSSRLPSEVLEAFERQTSYGDGADTADFRGTGRRTPPNEA
IQKKVFEMLPLLVSSASAVDRLSGGTGVGTAVYGNQEVGGEADRPGAAAG
VLPVADAALSFLSREIVLLSAVAPEANRGAHGRRKLALAKAVLGVLENCY
DGSAGGGASDDDYDSDVLGPESWPWNAAAASDAAAAASGAWCHASWPVRS
LPSWGPRLADIAGDRSGRASGERNGSTAVAVVDRAARVVQLVLREHAGAA
WRAALSALRPLPSASSSGSGSASQSSGRMEDDECVVPLCGPLLERICLEL
PLMDLPVRVHAAVFEAHGWLSLLPCGMTERDFSPENSCLGQVQFFVKLFV
PYVQGLTEIVKNRGASVSPALLPQVAPSILQQALLAAIPAARAALEELVS
RSVFSDGGRRGDLRPLLGRFPPDCARACFQAVPQALGAMAAAGPHLSLKS
WSPLFQAVGVLGCAVLLPEASAGDGDEEEEERQGEGEEGELWEVLEAVWE
FIFLQVIPEVLPALREQHATRLEEAFRALFGSLESLWPLLTGPVAQRRRP
RLADGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASS
CSSAASGGDDRGARGDDDPSVGVSPRKTVRLVGDKLCAVEGDGGSAWALS
SGDPGETDLLAVLKSAAAAASTEGTAVDPCSPPAAPGGAAGSRVDPHSPE
APRNPFALSAARRGNGGSSATNGWSRTPWEDRLGVRDSATPSLESAGRSL
SGSALAQVTYSSPAAAPEPTVRTRGVILGSHHPRAGGNDFSQARQGGSTA
GGGGGGGGGGGGGGFRDSRGRSTTASTEGGSLGVRPEKTASRAVSNSTAN
DDDEVGSSSGARGKKTYVTAAEAAAARASEAKANTAKVAAAAAARSRGSV
VERWREMQRMQVRETTEAVASAPAASQSRSLQQQQQQQQQQQQQEQARSP
RNAAAQTTSKEARAAFATAAQAAARRGDSPDGGNGSLATTVAGAATLDYA
SLAEASATELHKLVLSSWTVPDLFAASTKSARSGGRLHGPKRGHEVGRSS
SSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSGGRGGG
RGGPPEAMTLRVASLVEGGKGGFGHVTMVADDGGGSSHRFAHDDVLLLAL
VKPSDGAAGGGHVGGDGGSAANTTACLGLFDKEPRGTARGPAGMPGSGRS
SVRAKVLFRSTTPGDRGRDRSTIERGAGAVIPKKATAESRGQGQGEEEAA
SAVLRAFREPGSQVRVTRLEGLSTSTREFVALEASPRVALLHHILQATSE
PSLQPLPETPQRAPGNSTTSNNNLWATKLAPPYLVDEASFTDACKRLSSV
EDSVLLGKSGAGSGSPATAAGLAADIAGPAESLMRSLRCLASFRVAPELL
SSHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGGGATAKGK
AGTKRSQDEERGGGGGCSGGGGGDSEGGAKAKVEAEQFVERVRPAAATKP
RLVGEKEQGEENDEQQEMSSSGHKSRSSIPDAGSSSSDISSKDTCPPGKQ
QKKRQETPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAHEDLTA
AARGNDVPATPETAVLAERRAPVNHVAATANRREGGARGGGSKGGVVLLQ
GPPGTGKTRTVLGVVSAVLARREEKDHASSGGGSGASARGMGTTLAPGAR
QKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNA
VAPRVVRLGKPSEDAADRVKAVSLEFMVEER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR027417P-loop_NTPase