prot_Ecto-sp13_S_contig1906.6063.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1906.6063.1
Unique Nameprot_Ecto-sp13_S_contig1906.6063.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length102
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1906.6063.1 vs. uniprot
Match: D7G3H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H8_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.220e-37
Identity = 84/176 (47.73%), Postives = 90/176 (51.14%), Query Frame = 0 
Query:    1 PLWTQEALIAAQNSRPTHPGMSSYQREEPGGFWVSIEEAVSAFVEVGVCMVPLPPRKAGDCREQEKILGGSGWAQERPQR--------------------------------------------------------------------------NRSECASGVCYRDVGVTVMRVR 102
            PLWTQEALIAAQNS PTHPGMSSY+ EEPG FWVSIEEAVSAFVEVGVCMVPLPPR  GDCR  E+ILGGS WA E  +R                                                                          NRS+ ASGVC+RDVGVTV+RVR
Sbjct:  491 PLWTQEALIAAQNSCPTHPGMSSYRLEEPGAFWVSIEEAVSAFVEVGVCMVPLPPRTGGDCRGHERILGGSRWAHEVRRRVVFKRRRDRAGGGQGSGREYWGSGGGTAGIGAAQGKEEGGRGEEEEGGMLWGASQVYALSVYETSRIFFSVYQENRSDSASGVCWRDVGVTVLRVR 666
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1906.6063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3H8_ECTSI1.220e-3747.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1906contigEcto-sp13_S_contig1906:4660..5957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1906.6063.1mRNA_Ecto-sp13_S_contig1906.6063.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1906 4660..5957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1906.6063.1 ID=prot_Ecto-sp13_S_contig1906.6063.1|Name=mRNA_Ecto-sp13_S_contig1906.6063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp
PLWTQEALIAAQNSRPTHPGMSSYQREEPGGFWVSIEEAVSAFVEVGVCM
VPLPPRKAGDCREQEKILGGSGWAQERPQRNRSECASGVCYRDVGVTVMR
VR
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