prot_Ecto-sp13_S_contig19059.6062.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig19059.6062.1
Unique Name	prot_Ecto-sp13_S_contig19059.6062.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	118

Homology

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BLAST of mRNA_Ecto-sp13_S_contig19059.6062.1 vs. uniprot
Match: D8LQA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA9_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 6.970e-67
Identity = 111/114 (97.37%), Postives = 111/114 (97.37%), Query Frame = 0

Query:    4 FSQFQGIVLARRLHFVGQVWNVVWSTLVLFGIFREGTALGIIVAIIVYPIFVFYMACFLRLMSELAVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDDAGTIV 117
            F  FQGIVLARRLHFVGQVWNVVWSTLVLFGI REGTALGIIVAIIVYPIFVFYMACFLRLMSELAVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDDAGTIV
Sbjct:   29 FRHFQGIVLARRLHFVGQVWNVVWSTLVLFGILREGTALGIIVAIIVYPIFVFYMACFLRLMSELAVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDDAGTIV 142

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BLAST of mRNA_Ecto-sp13_S_contig19059.6062.1 vs. uniprot
Match: A0A6H5L548_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L548_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.440e-59
Identity = 101/114 (88.60%), Postives = 104/114 (91.23%), Query Frame = 0

Query:    4 FSQFQGIVLARRLHFVGQVWNVVWSTLVLFGIFREGTALGIIVAIIVYPIFVFYMACFLRLMSELAVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDDAGTIV 117
            F  FQGIVLARRLH+V QVWNVVWSTLVL  +FREG  L IIVAII+YPIFVFYMACFLRLMSEL VSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVD AGTIV
Sbjct:   29 FRHFQGIVLARRLHYVAQVWNVVWSTLVLSTVFREGNPLAIIVAIIIYPIFVFYMACFLRLMSELTVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDGAGTIV 142

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig19059.6062.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig19059.6062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQA9_ECTSI	6.970e-67	97.37	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L548_9PHAE	1.440e-59	88.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..64
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 65..117
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 37..41
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..36
None	No IPR available	TMHMM	TMhelix		coord: 40..62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig19059	contig	Ecto-sp13_S_contig19059:2322..2675 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig19059.6062.1	mRNA_Ecto-sp13_S_contig19059.6062.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig19059 2322..2675 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig19059.6062.1 ID=prot_Ecto-sp13_S_contig19059.6062.1|Name=mRNA_Ecto-sp13_S_contig19059.6062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
VLLFSQFQGIVLARRLHFVGQVWNVVWSTLVLFGIFREGTALGIIVAIIV
YPIFVFYMACFLRLMSELAVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDA
DLAAYGVSGVDDAGTIV*