prot_Ecto-sp13_S_contig19043.6054.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19043.6054.1
Unique Nameprot_Ecto-sp13_S_contig19043.6054.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19043.6054.1 vs. uniprot
Match: A0A6H5LJ83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ83_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 5.170e-119
Identity = 190/207 (91.79%), Postives = 194/207 (93.72%), Query Frame = 0 
Query:   13 MLRRLTTKGVVEALAFTHPGCASRRIFFPGAVNAAQWQRQPEQQQWISSSTRGLKSSPAXXXXXXXXXXXXXXPSGEKRKQDWAPGTPPAGRDQTIGEAFAAMQYHARGTRKVKASVLNRILERVTSEDDLKYACLGLKIFKTQGIDLEKKTATLFIKACCKAGSPQMAVDVLGEAAKYGLDGEGVVCAHRFNYLLSQLYIAGDSES 219
            MLRRLTTKGV+EALA THPGCASRRIFFPGA NA QWQRQPEQQQWISSSTRGL        XXXXXXXXXXXPSGEKRKQDWAPGTPPAGRDQTIGEAFAAMQYHARGTRKVKASVLNRILERVTS +DLKYACLGLKIFKTQGIDLEKKTATLF+KACCKAGSPQMAVDVLGEAAKYGLDGEGVV AHRFNYLLSQLYIAGDSE+
Sbjct:    1 MLRRLTTKGVLEALASTHPGCASRRIFFPGAANATQWQRQPEQQQWISSSTRGLXXX-----XXXXXXXXXXXPSGEKRKQDWAPGTPPAGRDQTIGEAFAAMQYHARGTRKVKASVLNRILERVTSAEDLKYACLGLKIFKTQGIDLEKKTATLFVKACCKAGSPQMAVDVLGEAAKYGLDGEGVVSAHRFNYLLSQLYIAGDSET 202
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BLAST of mRNA_Ecto-sp13_S_contig19043.6054.1 vs. uniprot
Match: D7FS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS35_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 2.420e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0 
Query:  180 MAVDVLGEAAKYGLDGEGVVCAHRFNYLLSQLYIAGDSES 219
            MAVDVLGEAAKYGLDGEGVV AHRFNYLLSQLYIAGDSE+
Sbjct:    1 MAVDVLGEAAKYGLDGEGVVSAHRFNYLLSQLYIAGDSET 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19043.6054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LJ83_9PHAE5.170e-11991.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS35_ECTSI2.420e-1495.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19043contigEcto-sp13_S_contig19043:432..3052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19043.6054.1mRNA_Ecto-sp13_S_contig19043.6054.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19043 432..3052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19043.6054.1 ID=prot_Ecto-sp13_S_contig19043.6054.1|Name=mRNA_Ecto-sp13_S_contig19043.6054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
LCEGLALDKVFAMLRRLTTKGVVEALAFTHPGCASRRIFFPGAVNAAQWQ
RQPEQQQWISSSTRGLKSSPAPAAAAAAAAAAAAAPSGEKRKQDWAPGTP
PAGRDQTIGEAFAAMQYHARGTRKVKASVLNRILERVTSEDDLKYACLGL
KIFKTQGIDLEKKTATLFIKACCKAGSPQMAVDVLGEAAKYGLDGEGVVC
AHRFNYLLSQLYIAGDSES
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