prot_Ecto-sp13_S_contig19033.6045.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19033.6045.1
Unique Nameprot_Ecto-sp13_S_contig19033.6045.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19033.6045.1 vs. uniprot
Match: D7FJ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ96_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 9.900e-90
Identity = 157/199 (78.89%), Postives = 164/199 (82.41%), Query Frame = 0 
Query:    1 RRPKANNEGGRSTNGPSPCAPNDEANCTAETIGEGFEEEAVSAHGSVSKLGHNRHKGREAGATTRLRQSPGTRTAKSSRPYPSSRSPLRGRARTSPSASERQEKISKHLFNSISQSRAVAEDAGDARAGGWTLDTMLYVGRSGASGRGKVGGEEEDCAGGVGQGSQKIALHRGLVITEELRKEILNPLAHRFKLLRRAH 199
            RRPKANNEGG STN   P  PNDEA CT ET+GE F+EE VSAHGSVS  G+  +KGREAGATTRLRQSP    AKSSRP PSSRSPLRGR   SP+AS  QEKI K LFN IS SRAVAEDAGDARAG WT DTM YVGRSG SGRGK+GGEEED AGGVGQGSQ +ALHRGLVITEELRKEILNPLA RFKLLRRAH
Sbjct:  166 RRPKANNEGGCSTNRAPPHEPNDEAICTTETLGERFDEEGVSAHGSVSGSGYKGYKGREAGATTRLRQSPDRGKAKSSRPCPSSRSPLRGRV--SPNASRPQEKIRKDLFNGISHSRAVAEDAGDARAGEWTPDTMFYVGRSGVSGRGKIGGEEEDSAGGVGQGSQNVALHRGLVITEELRKEILNPLAQRFKLLRRAH 362
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19033.6045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ96_ECTSI9.900e-9078.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19033contigEcto-sp13_S_contig19033:217..1059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19033.6045.1mRNA_Ecto-sp13_S_contig19033.6045.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19033 217..1059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19033.6045.1 ID=prot_Ecto-sp13_S_contig19033.6045.1|Name=mRNA_Ecto-sp13_S_contig19033.6045.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
RRPKANNEGGRSTNGPSPCAPNDEANCTAETIGEGFEEEAVSAHGSVSKL
GHNRHKGREAGATTRLRQSPGTRTAKSSRPYPSSRSPLRGRARTSPSASE
RQEKISKHLFNSISQSRAVAEDAGDARAGGWTLDTMLYVGRSGASGRGKV
GGEEEDCAGGVGQGSQKIALHRGLVITEELRKEILNPLAHRFKLLRRAH*
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