prot_Ecto-sp13_S_contig19032.6044.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19032.6044.1
Unique Nameprot_Ecto-sp13_S_contig19032.6044.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: D7G473_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G473_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 3.500e-49
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 82
            QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD
Sbjct:  169 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 250          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: A0A835Z838_9STRA (Fibrillarin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z838_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.120e-39
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 79
            QARIVALNSHYFLKNGGHCVIS+KASCVDSTA+PEAVFAQEVSKL++E FKP EQ+TLEPYERDHAVV+A YR  KKSK
Sbjct:  169 QARIVALNSHYFLKNGGHCVISVKASCVDSTAAPEAVFAQEVSKLRSEGFKPLEQLTLEPYERDHAVVVAEYRAAKKSK 247          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: A0A7R9WR07_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WR07_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.900e-39
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 82
            QARIVALNSH+FL+NGGH VI+IKASC+DSTA+PEAVF +EVSKL++ENFKP EQ+TLEPYERDHAVVIA YRP KK KSKD
Sbjct:  120 QARIVALNSHHFLRNGGHAVIAIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHAVVIAEYRPNKKKKSKD 201          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: A0A7S2UWV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 6.560e-38
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 82
            QARIVALN+HYFLKNGGH VISIKASC+DSTA PEAVFA+EV KL+TE FKP EQ+TLEPYERDHAVV+  YRPPKK+K  +
Sbjct:  191 QARIVALNAHYFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQTEQFKPAEQLTLEPYERDHAVVVGAYRPPKKAKKSE 272          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: A0A1E7FV03_9STRA (Fibrillarin n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FV03_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.580e-37
Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 82
            QARIVALN+HYFLKNGGH VI++KASC+DSTA+PEAVF +EVSKL+ ENFKP EQ+TLEPYERDHAVVIA YRP KKSKS D
Sbjct:  146 QARIVALNAHYFLKNGGHAVIAVKASCIDSTAAPEAVFRREVSKLQKENFKPLEQLTLEPYERDHAVVIAEYRP-KKSKSSD 226          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: A0A3P7DE58_WUCBA (Uncharacterized protein n=1 Tax=Wuchereria bancrofti TaxID=6293 RepID=A0A3P7DE58_WUCBA)

HSP 1 Score: 130 bits (327), Expect = 1.840e-37
Identity = 63/80 (78.75%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 80
            QARIVA+N+H+FLKNGGH VISIKA+C+DSTA+PEAVFA EV+KLK E FKP+EQVTLEPYERDHAVV+A YRP KK +S
Sbjct:   43 QARIVAINAHHFLKNGGHVVISIKANCIDSTAAPEAVFAGEVNKLKEEKFKPREQVTLEPYERDHAVVVAEYRPLKKKQS 122          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: A0A0M3I7W2_ASCLU (Uncharacterized protein n=1 Tax=Ascaris lumbricoides TaxID=6252 RepID=A0A0M3I7W2_ASCLU)

HSP 1 Score: 131 bits (329), Expect = 2.450e-37
Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKS 78
            QARIVALN+ YFLKNGGH VISIKA+CVDSTA PEAVFA EV+KLK E FKP+EQVTLEPYERDHAVV+A YRP KKS
Sbjct:   75 QARIVALNARYFLKNGGHAVISIKANCVDSTAEPEAVFAGEVNKLKEEKFKPREQVTLEPYERDHAVVVAEYRPKKKS 152          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: B7G8V5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8V5_PHATC)

HSP 1 Score: 134 bits (337), Expect = 1.020e-36
Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 82
            QARIVALNSHYFLKNGGH VI+IKASC+DSTA+PEAVF +EV KL++ENFKP EQVTLEPYERDHAVV+A YRP KK KSK+
Sbjct:  237 QARIVALNSHYFLKNGGHAVIAIKASCIDSTAAPEAVFQREVEKLRSENFKPIEQVTLEPYERDHAVVVAEYRP-KKKKSKE 317          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: A0A3P7I1V2_TOXCA (Uncharacterized protein n=2 Tax=Toxocara canis TaxID=6265 RepID=A0A3P7I1V2_TOXCA)

HSP 1 Score: 132 bits (331), Expect = 1.050e-36
Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKS 78
            QARIVALN+H+FLKNGGH VISIKA+C+DSTA PEAVFA EV+KLK E FKP+EQVTLEPYERDHAVV+A YRP KKS
Sbjct:  153 QARIVALNAHHFLKNGGHAVISIKANCIDSTAEPEAVFAGEVNKLKEEKFKPREQVTLEPYERDHAVVVAEYRPKKKS 230          
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Match: B8CBC2_THAPS (Uncharacterized protein n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8CBC2_THAPS)

HSP 1 Score: 134 bits (336), Expect = 1.080e-36
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 80
            QARIVALNSHYFLKNGGH VI+IKASC+DSTA+PEAVF +EVSKL++ENFKP EQ+TLEPYERDH V+IA YRP KK KS
Sbjct:  223 QARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLIAQYRPSKKKKS 302          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19032.6044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G473_ECTSI3.500e-49100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z838_9STRA2.120e-3986.08Fibrillarin n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7R9WR07_9STRA4.900e-3981.71Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2UWV2_9STRA6.560e-3879.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1E7FV03_9STRA1.580e-3781.71Fibrillarin n=1 Tax=Fragilariopsis cylindrus CCMP1... [more]
A0A3P7DE58_WUCBA1.840e-3778.75Uncharacterized protein n=1 Tax=Wuchereria bancrof... [more]
A0A0M3I7W2_ASCLU2.450e-3783.33Uncharacterized protein n=1 Tax=Ascaris lumbricoid... [more]
B7G8V5_PHATC1.020e-3681.71Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A3P7I1V2_TOXCA1.050e-3682.05Uncharacterized protein n=2 Tax=Toxocara canis Tax... [more]
B8CBC2_THAPS1.080e-3681.25Uncharacterized protein n=2 Tax=Thalassiosirales T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000692FibrillarinSMARTSM01206Fibrillarin_2coord: 1..74
e-value: 2.4E-9
score: -31.4
IPR000692FibrillarinPFAMPF01269Fibrillarincoord: 1..73
e-value: 4.0E-27
score: 94.8
NoneNo IPR availableGENE3D3.40.50.150coord: 1..74
e-value: 6.2E-26
score: 92.8
NoneNo IPR availablePANTHERPTHR10335:SF6RRNA/TRNA 2'-O-METHYLTRANSFERASE FIBRILLARIN-LIKE PROTEIN 1coord: 1..81
NoneNo IPR availablePANTHERPTHR10335RRNA 2-O-METHYLTRANSFERASE FIBRILLARINcoord: 1..81
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 2..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19032contigEcto-sp13_S_contig19032:2012..3052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19032.6044.1mRNA_Ecto-sp13_S_contig19032.6044.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19032 2012..3052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19032.6044.1 ID=prot_Ecto-sp13_S_contig19032.6044.1|Name=mRNA_Ecto-sp13_S_contig19032.6044.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
QARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENF
KPKEQVTLEPYERDHAVVIALYRPPKKSKSKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000692Fibrillarin
IPR029063SAM-dependent_MTases