prot_Ecto-sp13_S_contig1901.6034.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A6H5KA31_9PHAE (RNA_pol_sigma70 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA31_9PHAE) HSP 1 Score: 1170 bits (3026), Expect = 0.000e+0 Identity = 731/849 (86.10%), Postives = 743/849 (87.51%), Query Frame = 0
Query: 1 MVLIRRRLTAVCVVGAMCASAPPRTQGFAPPGSFGRNQGAGDSFYCAERRLAATSLGERTSAALAPGRRERRAAAAVSRCSMASSSRKAAVRPGVAARSGAARAAAXXTRKRGRGRVPQSSSSTGVAVKDRAATDVGAVDKQSRAKGASSQAIAPTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKADAAGGVAPPLQDVSPSVPAKTVSA---PSSXXXXXXDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVDGKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEKNTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAEGLEAKQRQPAIGVEKGGAAGLAAAGDRPLKIEFKAGVDASESTQAVEAVLVAALDRAPAAEGVPAKRESGGRSGSNKXXXXXXXXXXXXXKQKADEVKVSSHPVDEETNGLRVAGSEKARRVGAGLELPALAVTPAGKLDVESKRSLTKRGESTHAGATIRLDAGLDIAGGGDANCSDGG-GDSDSPAAAATVLSAEEQRALEIESKRKSLNKAWNKKSEAAVDRLERELAQSAAALAMLEGEQEEWERSVGREVEEKSLSMASL 845
MVLIRRRLTAVCVVGAMCASAPPRTQGFAPP SFGR GAGDSF+CAERRLAATSLGE TSAA APGR XX RKRGR RVPQSSSS G AVKDRAATDVGAVDKQ RA+GA SQA APT A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SKAD AGGVAPP ++VSPSVPAKTVSA XXXXXXDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVDG+VPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEK+TPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAEGLEAKQRQPA GVEKGGAAGLAAAGDRPLKIEFKAGVDASESTQAVEAVLVAALDRAPA + VPA+RESGG+SG XXXXXXXX K+KADEVKV HP DE TNGL VAG EKA RV AGLELPALAVTPAGKLDVESKRSL +RGE TH GATIRL AGLD AGGGDAN SDGG AEEQRALEIESKRKSLNKAWNKKSEAAVDRLERELAQSAAALAMLEGEQEEWERSVGR VEEKSLS+ASL
Sbjct: 1 MVLIRRRLTAVCVVGAMCASAPPRTQGFAPPASFGRTHGAGDSFHCAERRLAATSLGESTSAASAPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRGRDRVPQSSSSAGAAVKDRAATDVGAVDKQLRARGAGSQARAPTVAAMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--SKADTAGGVAPPSKEVSPSVPAKTVSAMXXXXXXXXXXXDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVDGRVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEKSTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAEGLEAKQRQPASGVEKGGAAGLAAAGDRPLKIEFKAGVDASESTQAVEAVLVAALDRAPATDAVPARRESGGKSGXX--XXXXXXXXGAPSKRKADEVKVCGHPADEVTNGLGVAGLEKACRVVAGLELPALAVTPAGKLDVESKRSLEERGEPTHVGATIRLGAGLDKAGGGDANPSDGGRXXXXXXXXXXXXXXAEEQRALEIESKRKSLNKAWNKKSEAAVDRLERELAQSAAALAMLEGEQEEWERSVGRGVEEKSLSLASL 845
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI) HSP 1 Score: 337 bits (863), Expect = 1.530e-100 Identity = 198/383 (51.70%), Postives = 264/383 (68.93%), Query Frame = 0
Query: 239 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELT-VDGKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSD--GAADDLGTQI-GEKNTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAEGLEAKQRQPAIGVEKGGAA--GLAAAGDRPLKIEFK 615
L Y +T+ K+ LLKP EE+VLGRQIQ+G+ E RD L+ G PS EEWA L + ++EL++EL+ A +AK M++ANLRLVVS+A+ YR + L+F DLIQEGT GLVKA EKF+PE GF+F TYA WWIK+SI+ GIA+QSR+IRLP VH FL+ +RK T E+T +GK+PTD+EL + L + +IQ+YR AA T S+ ++K S G ++G + G + TP+ + Q+ MK KVT LL TL REQ+VV+AR+GL GA +TLEE+GRD LTRERVRQIE++AL KLRQPYRNYRVR+ K+ Q+ V AG+ P A+ AAR +AEAE AK+ + A+ ++ G A G AGD + E +
Sbjct: 51 LAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPSEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDDELAEHLEVSAVRIQYYRDAAQATLSMEAPRNIASKTSTSPGKKVEMGQGVSGPEKTPDKQ--AQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPPKGAIKAARQAVAEAEAA-AKRNEVALVHQRMGTAPGGGKPAGDVGITSELQ 430
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE) HSP 1 Score: 336 bits (862), Expect = 2.350e-99 Identity = 198/383 (51.70%), Postives = 264/383 (68.93%), Query Frame = 0
Query: 239 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELT-VDGKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSD--GAADDLGTQI-GEKNTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAEGLEAKQRQPAIGVEKGGAA--GLAAAGDRPLKIEFK 615
L Y +T+ K+ LLKP EE+VLGRQIQ+G+ E RD L+ G P+ EEWA L + ++EL++EL+ A +AK M++ANLRLVVS+A+ YR + L+F DLIQEGT GLVKA EKF+PE GF+F TYA WWIK+SI+ GIA+QSR+IRLP VH FL+ +RK T E+T +GK+PTDEEL + L + +IQ+YR AA T S+ ++K S G ++G + G + TP+ + Q+ MK KVT LL TL REQ+VV+AR+GL GA +TLEE+GRD LTRERVRQIE++AL KLRQPYRNYRVR+ K+ Q+ V AG+ P A+ AAR +AEAE AK+ + A+ ++ G A G AGD + E +
Sbjct: 181 LAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPTEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDEELAEHLEVSAVRIQYYRDAAQATLSMEAPRTIASKTSTSPGKKVEMGQGVSGPEKTPDKQ--AQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPPKGAIKAARQAVAEAEAA-AKRNEVALVHQRMGTAPGGGKPAGDVGITSELQ 560
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA) HSP 1 Score: 273 bits (698), Expect = 7.560e-81 Identity = 155/315 (49.21%), Postives = 209/315 (66.35%), Query Frame = 0
Query: 243 FKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVD-GKVPTDEELGDKLGATVEKIQHYRQAALRTDSI----SLDTRASNKVSDGAADDLGTQIGEKNT-PNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREH 551
FK + I LLKP+EE+ L RQI+ G++ E R+ L PS EWA+ + + +D L + + AK MISANLRL VS+A+ YR RGLA PDLIQEG+ GL+KA E+F+PE GF+F TYA WWIK+SI+ IA+QSR IRLP VH FL+S+++ T EL+++ G+ PTDEEL +L T +KI YR AA S+ + +R + S G D+ + ++ P PED TQ +K + LL TL REQ+VVR R+GLD ++TLEEIG+ +TRERVRQIES+AL KLRQPYRN+++R +
Sbjct: 21 FKRMTSIDLLKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAKRYRRRGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLELGRHPTDEELAMRLQVTAQKIVFYRDAAQSVLSMEQSRNFASRKGSGASQGGKSDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAY 335
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA) HSP 1 Score: 277 bits (709), Expect = 1.590e-80 Identity = 155/333 (46.55%), Postives = 221/333 (66.37%), Query Frame = 0
Query: 236 ANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVD-GKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEK---NTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLRE 564
+N L +FK++ + LL+ +EEV+L R++Q + E VRD L+ G P+ EEWAS++ + DEL R+L AK+ MIS+NLRLV+S+A+ Y+ RGLA DLIQEG++GLV+A EKF+PE GF+F TY+ WWIK++IL IA+QSR IRLP +H L++++K T EL V G+ PT+EEL +++ +EK++ ++ + S+ RA K S A Q+G+ + P P T+A +K + L+ TL REQ V+R R+GLD KTLEEIG +TRERVRQIE++AL KLRQPYRN+++RE+ GQ DA LR+
Sbjct: 157 SNELGWFFKSIGQHSLLRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQKRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHDLLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRPAVSMDAQRRAMTKKSSSAGKGGEVQLGDSIKDDGPCPTQVTEANMLKEDIEKLVCTLSPREQDVIRMRFGLDADKPKTLEEIGNVFSVTRERVRQIEARALHKLRQPYRNHKLREY-AGQDSQDASLRD 488
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.950e-78 Identity = 153/321 (47.66%), Postives = 210/321 (65.42%), Query Frame = 0
Query: 236 ANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVD-GKVPTDEELGDKLGATVEKIQHYRQAA---LRTDSISLDTRASNKVSDGAADDLGTQIGEKNT-PNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREH 551
A L+ Y + I LLKP+EEV LGR IQ GL+ E ++ L PS EWA+ + + +D L + + AK MISANLRL VS+A+ Y+ RGLA DL+QEG+ GL+KA E+F+P+ GF+F TYA WWIK+SI+ IA+QSR IRLP VH L+SI++ T EL+++ G+ PTDEEL +L +KI+ YR+AA L + + R + S G D+ + ++ P PED TQ +K ++ LL TL REQ+VVR R+GLD ++TLEEIG+ +TRERVRQIES+AL KLRQPYRN+++R +
Sbjct: 55 AGALSWYLSRMSAIDLLKPEEEVTLGRHIQLGLEWEAAKEELAVRLERQPSRAEWAAHMGVDEDTLKLIMIRSSRAKTTMISANLRLAVSIAKRYKHRGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLELGRTPTDEELSLRLQVPTQKIEFYREAARSVLSMEQSLNNARKGSAASLGGKSDMTLEDSLRDPEPLPEDRTQQSMLKENMSQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAY 375
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A7S2KJI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJI8_9STRA) HSP 1 Score: 244 bits (622), Expect = 5.150e-69 Identity = 143/318 (44.97%), Postives = 198/318 (62.26%), Query Frame = 0
Query: 242 YFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELT-VDGKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEKNT---------PNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVR 549
Y KT+ LL+ +EEV+L R IQ ++ E VR+ LE+ P+ EWA ++L L R++ + AK +I +NLRLVVS+A+ Y RG+ F DL QEGT+GL +A EKF+PE GF+F TYA WWIK+ I+ IA+QSR IRLP VH L+ +R+ T EL+ + G+ PTDEE+ +K TV+K+ R+A T IS++T + G++ G+ T P P D +K V+ +L TL REQ V+R R+GLD +KTLEEIGR +TRER+RQIE++AL KLRQPYRN+ V+
Sbjct: 93 YLKTMGNHDLLRREEEVILARHIQILIKWEEVREELESKLIRPPTYAEWAVAVNLDVPGLKRQIRRSQRAKAALIESNLRLVVSIAKRYVNRGMNFQDLCQEGTLGLTRATEKFDPERGFRFSTYATWWIKQGIMRAIADQSREIRLPVHVHDQLNGVRRVTKELSELLGRDPTDEEIAEKAKITVQKLTFLRKAQQGT--ISIETPMNMGAGKGSSSGGGSMGQNDKTMGDLLRDSGPAPVDLASNEMLKDDVSRMLCTLSPREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIEARALHKLRQPYRNHSVK 408
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A1Z5JWI1_FISSO (RNA polymerase primary sigma factor n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWI1_FISSO) HSP 1 Score: 241 bits (614), Expect = 2.210e-67 Identity = 138/319 (43.26%), Postives = 202/319 (63.32%), Query Frame = 0
Query: 242 YFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHL--TKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVD-GKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEKNT-------PNPEDATQAFY--MKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRV 548
Y KT+ +LL +EE+VL R+IQ ++ E VR++LET P+ +EWA+ + L T +L +++ + AK + +N+RLVVS+A+ Y RGL+F DL QEG +GL +ACEKF+PE GF+F TYA WWIK+ I+ IA+ R+IRLP +H ++++RK E+TV+ G+ PT +E+ +K T+EKI+ + +SIS+D S G++ LG G T P + +A Y +K ++ L+ TL REQ V+R R+GLD KTL+EIGR +TRER+RQIE++AL KLRQPYRN+ V
Sbjct: 132 YMKTMCNHELLNRNEEIVLAREIQILMKWEAVREQLETDLLRPPTYQEWANQIELGMTVADLKKQIRRSLRAKAALTESNIRLVVSIAKRYGRRGLSFQDLAQEGILGLTRACEKFDPERGFRFSTYASWWIKQGIMRAIADHGRMIRLPVHIHDQMNAVRKLEREMTVELGRAPTAKEVAEKSNLTLEKIEFLNRVT--QESISMDEELRTSKSKGSSAGLGGAGGRGITLEEIMGDPESQPVEEATYQMLKDDISRLICTLNSREQAVIRMRFGLDDGKCKTLDEIGRKFSVTRERIRQIEARALHKLRQPYRNHAV 448
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A182AKZ1_9CYAN (RNA polymerase sigma factor SigA n=1 Tax=Cyanobium sp. NIES-981 TaxID=1851505 RepID=A0A182AKZ1_9CYAN) HSP 1 Score: 241 bits (614), Expect = 2.650e-67 Identity = 143/354 (40.40%), Postives = 215/354 (60.73%), Query Frame = 0
Query: 199 SKADAAGGVAPPLQDVSPSVPAKTVSAPSSXXXXXXDANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVD-GKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEKNTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREH 551
+KAD A A P++D AK +++ + + VY + + +I+LL+PDEE+ L R+I LQLE + + E HG P +EWA+ + + + R L + AKE M+ +NLRLVVS+A+ Y RGL+F DLIQEG++GL++A EKF+ E G++F TYA WWI+++I IA+QSR IRLP ++ +S I+K T L+ + G+ PT+EE+ + + T+EK++ ++A ISL+T + D + E + NPE ++ + +LATL RE+ V+R RYGLD KTLEEIG+ +TRER+RQIE+KAL KLR P RN ++E+
Sbjct: 118 AKADPA---ARPVKDAGDDKAAKALASIKVGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELAAQFEADHGHHPDNKEWAALVDMPLIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKTLSQEFGRKPTEEEIAESMEMTIEKLRFIAKSAQLP--ISLETPIGKEEDSRLGDFI-----EADIENPEQDVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRHPNRNGVLKEY 461
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Match: A0A2P7MXF5_9CYAN (RNA polymerase sigma factor SigA n=3 Tax=Cyanobium TaxID=167375 RepID=A0A2P7MXF5_9CYAN) HSP 1 Score: 240 bits (612), Expect = 3.920e-67 Identity = 134/314 (42.68%), Postives = 199/314 (63.38%), Query Frame = 0
Query: 239 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVD-GKVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEKNTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREH 551
+ VY + + +I+LL+PDEE+ L R+I LQLE + + E HG P +EWA+ + + + R L + AKE M+ +NLRLVVS+A+ Y RGL+F DLIQEG++GL++A EKF+ E G++F TYA WWI+++I IA+QSR IRLP ++ +S I+K T L+ + G+ PT+EE+ + + T+EK++ ++A ISL+T + D + E + NPE ++ + +LATL RE+ V+R RYGLD KTLEEIG+ +TRER+RQIE+KAL KLR P RN ++E+
Sbjct: 145 IRVYLQEIGRIRLLRPDEEIELARKIADLLQLEEIAAQFEADHGRQPDNKEWAALVEMPSIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKTLSQEFGRKPTEEEIAESMEMTIEKLRFIAKSAQLP--ISLETPIGKEEDSRLGDFI-----EADIENPEQDVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRHPNRNGVLKEY 451 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1901.6034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig1901.6034.1 ID=prot_Ecto-sp13_S_contig1901.6034.1|Name=mRNA_Ecto-sp13_S_contig1901.6034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=846bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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