prot_Ecto-sp13_S_contig1901.6033.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1901.6033.1
Unique Nameprot_Ecto-sp13_S_contig1901.6033.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1901.6033.1 vs. uniprot
Match: D8LNI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI5_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.430e-17
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0 
Query:    1 MLLIRGLSLLAVGIAAAPIGCALVPPTPLPRTSAGGHAAATARGKH 46
            MLL+RGLSLLAVG+AAAP GCALVPPTPLPRT+AGGHAAATARGKH
Sbjct:    1 MLLVRGLSLLAVGLAAAPTGCALVPPTPLPRTTAGGHAAATARGKH 46
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1901.6033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNI5_ECTSI5.430e-1791.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.738
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1901contigEcto-sp13_S_contig1901:5674..5811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1901.6033.1mRNA_Ecto-sp13_S_contig1901.6033.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1901 5674..5811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1901.6033.1 ID=prot_Ecto-sp13_S_contig1901.6033.1|Name=mRNA_Ecto-sp13_S_contig1901.6033.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
MLLIRGLSLLAVGIAAAPIGCALVPPTPLPRTSAGGHAAATARGKH
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