prot_Ecto-sp13_S_contig1901.6032.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1901.6032.1
Unique Nameprot_Ecto-sp13_S_contig1901.6032.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length238
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: D8LNI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI5_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 8.010e-128
Identity = 195/228 (85.53%), Postives = 201/228 (88.16%), Query Frame = 0 
Query:    6 LRQIASWRGGAVEGSEGGPPLMNAQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTIAVRGG 233
            +RQIASWRGGAVE SEGGPPLMN QLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLK+NPIRAYGESVVVLFQTLVMVGLLWRFG E EVAVS+G                    PAGGGP+GRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELA+LTVLLAF GSS+RIATTIA  GG
Sbjct:   47 VRQIASWRGGAVESSEGGPPLMNVQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKKNPIRAYGESVVVLFQTLVMVGLLWRFGAEEEVAVSDGGGDEEALVTKSTKKVK----PAGGGPVGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAVLTVLLAFVGSSIRIATTIADLGG 270
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: A0A6H5K508_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K508_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 1.290e-116
Identity = 188/207 (90.82%), Postives = 190/207 (91.79%), Query Frame = 0 
Query:   27 MNAQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTIAVRGG 233
            MNAQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTE EVAVS+GXXXXXXXX            PAGGGPLGRTAI  GSVAASVLCVLYLPERLWGLLV+VSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTIA  GG
Sbjct:    1 MNAQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEEEVAVSDGXXXXXXXXALVTKSIKKVK-PAGGGPLGRTAIAVGSVAASVLCVLYLPERLWGLLVVVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTIADLGG 206
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: A0A7S1C7W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7W5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.930e-18
Identity = 66/217 (30.41%), Postives = 98/217 (45.16%), Query Frame = 0 
Query:   33 LVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYL---------------------PERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTI 228
            L R     I AGSL LK PQ A++  A +  GL+P+S+Y +V  F T+ +        + +YGESV +L Q +++V LLW +  EG                                PLG    V  + AA V  V+YL                     P+ + GL      P     +L Q+W N++Q HTG+LA++TVLL F G++ R+ T++
Sbjct:   84 LSRFLSLAITAGSLTLKAPQAAKIMAAGNAEGLSPSSMYLEVATFLTASVTSYANGYTLASYGESVSILIQNILLVFLLWHY--EGAKH-----------------------------PLGERVGVLAACAAWVAPVVYLYATHGEAWETAAGVPQWLRMYPDIILGL----GIPLTAVARLSQVWANFKQGHTGQLALVTVLLNFAGAAARVFTSL 265
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: A0E4V5_PARTE (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E4V5_PARTE)

HSP 1 Score: 90.9 bits (224), Expect = 2.550e-18
Identity = 58/190 (30.53%), Postives = 94/190 (49.47%), Query Frame = 0 
Query:   39 YGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTI 228
            Y I+A S+ LK PQI ++     + GL+  SI+ ++F+++ S+ Y+V K NP + Y E+V +LFQT+++V L   +  E    +                               R AI  G      L    +P  ++ L +I++   IL  +LPQIW N+R K TG+LA +T+ L F G++ R  T +
Sbjct:   64 YSIVALSVILKAPQIFKIVQKSKVTGLSFDSIFFELFVYSFSIAYNVHKGNPWKLYAENVAILFQTVIIVALFKVY--EKSFTLRQFYL--------------------------RIAIFLG--VNLPLFTGLIPNSIFNLAIIINICLILFARLPQIWSNFRNKDTGQLAFITIFLQFAGAAARCFTIL 223
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: A0A2R5GIZ9_9STRA (Mannose-P-dolichol utilization defect 1 protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIZ9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.340e-16
Identity = 61/197 (30.96%), Postives = 99/197 (50.25%), Query Frame = 0 
Query:   35 RVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEG---EVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTI 228
            +V G  +I GS  +K PQIA +  AK++ GL+    Y  +     +V Y +  ++P  ++G+S+ VL Q L++VGL+W +G      +VA+S                            LG    V G+VA+  L     PE+LW L  ++S+   L+  +PQI +N+  +HTG L+ +T L+ F G   R+ TT+
Sbjct:  274 KVLGAVLITGSFGVKVPQIASIMDAKTVKGLSSVKSYTAIQALVLTVAYSLANKHPFTSWGDSLSVLIQELIIVGLMWTYGETSLITQVALS----------------------------LGFLGFV-GTVASFTLNTR--PEKLWAL-PLLSSVISLSGTIPQIIENFNNQHTGALSFVTQLMVFLGVVARVFTTL 438
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: A0A8J2AI14_9DINO (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2AI14_9DINO)

HSP 1 Score: 82.4 bits (202), Expect = 2.250e-15
Identity = 57/201 (28.36%), Postives = 92/201 (45.77%), Query Frame = 0 
Query:   31 LGLVRVA-GYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCV--LYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTI 228
            +GLV  A     + GS+ LK PQI R+W  +S+ G+A   +  +      S  Y  LK  P   +GES  +  QTL+ VGL W+F  + ++                              P     I+       VL    + L + +   + ++ +    A ++PQIW+N+ Q HTG L+++T +LA+ G  VR+ATT+
Sbjct:   16 VGLVMQALNVATLMGSIGLKAPQIFRIWKLRSVTGIAETMVITEALNSGLSTTYAFLKGFPFGTWGESAFIWVQTLMQVGLFWKFSPKLDLF-----------------------------PRYLAGIIYVLTFVVVLNHGHILLDDFVIDTIGLIPSGLGTASKIPQIWRNYSQGHTGTLSLITWMLAWAGCVVRVATTV 187
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: L8GRK2_ACACA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRK2_ACACA)

HSP 1 Score: 81.3 bits (199), Expect = 9.190e-15
Identity = 57/196 (29.08%), Postives = 86/196 (43.88%), Query Frame = 0 
Query:   33 LVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTI 228
            L +   +G++AGSL  K PQI +V +++S  GLA   +  ++     S  Y   K  P   YGESV V    L+++  +  F   G                               G  G   I     A   L   ++P     ++    TP ++A +LPQIW+++R K TG+L+ +T  L FGGS  RI TT+
Sbjct:   34 LSKFLSFGVVAGSLVYKLPQILKVQNSRSAKGLAMLGVLLELLSVTISFSYSYSKGFPFMTYGESVFVAGANLLIICQILSFEHGGV------------------------------GFQGLAGIALYGAAVYALLGGFVPFSALQIMQGCVTPIVIASRLPQIWESYRNKSTGQLSFITWFLNFGGSLARIFTTL 199
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: A0A6U3U4X2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3U4X2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.760e-14
Identity = 47/174 (27.01%), Postives = 83/174 (47.70%), Query Frame = 0 
Query:   56 VWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQL-PQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTI 228
            ++ +KS +GL+P S Y +V +++ +  Y++ + NP  AYGE+ +V+ QT+V+V ++WR+G E +                             GG      +V G+    +  V Y+  +    +++V  P +L      QI  N +QK TG  ++ T  +   GS +R  TTI
Sbjct:    5 IYSSKSALGLSPTSTYGEVIMYSNAAFYNLRRGNPFTAYGETFMVMVQTVVVVLMIWRYGEEKK-----------------------------GGRTNNVGVVCGAYLVYLFVVFYVLTQDTIYILMVYNPIVLLTSRGSQILANHQQKQTGAQSLATTGMNLTGSLIRTVTTI 149
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: A0A836CGJ2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.370e-14
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 0 
Query:   29 AQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRF 114
            A++   ++AG GII GS+ +K PQI R+  A+S++GL+  + Y +V L +  VIYH  K  P  AYGE+  +L Q L++V L+WR+
Sbjct:   45 ARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRY 130
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BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Match: I7LU15_TETTS (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7LU15_TETTS)

HSP 1 Score: 78.6 bits (192), Expect = 9.840e-14
Identity = 52/196 (26.53%), Postives = 91/196 (46.43%), Query Frame = 0 
Query:   33 LVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEGEVAVSNGXXXXXXXXXXXXXXXXXXXTPAGGGPLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTI 228
            L ++ G  I+  S  LK PQI ++   KS+ GL+  ++ ++ FL+  +V Y++ K+N    YGE+V ++ Q ++++ L + +G    +                               L  T IV G VA  +L  +  P +L+   +I++       + PQI+ N++ K TG+LA  TV L   G   R  T +
Sbjct:   57 LSKILGTSIVVFSTILKVPQILKIVKNKSVEGLSFPALASETFLYFFTVSYNLYKQNSFSLYGENVFIIIQNIIIMALFYVYGKNFSLV-----------------------------KLLSTYIVFGVVAGPLLLQIA-PTKLYDFAMIINMVLFFFGRAPQIYSNFKNKSTGQLAAFTVFLNLSGCIARTFTVL 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1901.6032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNI5_ECTSI8.010e-12885.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K508_9PHAE1.290e-11690.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1C7W5_9STRA1.930e-1830.41Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0E4V5_PARTE2.550e-1830.53Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A2R5GIZ9_9STRA1.340e-1630.96Mannose-P-dolichol utilization defect 1 protein-li... [more]
A0A8J2AI14_9DINO2.250e-1528.36Mannose-P-dolichol utilization defect 1 protein ho... [more]
L8GRK2_ACACA9.190e-1529.08Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A6U3U4X2_9STRA3.760e-1427.01Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A836CGJ2_9STRA6.370e-1443.02Mannose-P-dolichol utilization defect 1 protein ho... [more]
I7LU15_TETTS9.840e-1426.53Mannose-P-dolichol utilization defect 1 protein ho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatSMARTSM00679ctnscoord: 190..221
e-value: 1.4E-4
score: 31.3
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 179..229
e-value: 9.8E-12
score: 44.5
coord: 34..90
e-value: 1.1E-7
score: 31.5
IPR016817Mannose-P-dolichol utilization defect 1 proteinPANTHERPTHR12226MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATEDcoord: 31..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..208
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 152..171
NoneNo IPR availableTMHMMTMhelixcoord: 208..230
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 176..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1901contigEcto-sp13_S_contig1901:1084..3615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1901.6032.1mRNA_Ecto-sp13_S_contig1901.6032.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1901 1084..3615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1901.6032.1 ID=prot_Ecto-sp13_S_contig1901.6032.1|Name=mRNA_Ecto-sp13_S_contig1901.6032.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MSPPALRQIASWRGGAVEGSEGGPPLMNAQLGLVRVAGYGIIAGSLCLKT
PQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVV
LFQTLVMVGLLWRFGTEGEVAVSNGGGGSGGDEEALVTKSTKKNTPAGGG
PLGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNW
RQKHTGELAMLTVLLAFGGSSVRIATTIAVRGGGVYD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt
IPR016817MannP-dilichol_defect-1