prot_Ecto-sp13_S_contig18997.6022.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18997.6022.1
Unique Nameprot_Ecto-sp13_S_contig18997.6022.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length159
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18997.6022.1 vs. uniprot
Match: D7FPE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE1_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 1.230e-93
Identity = 148/159 (93.08%), Postives = 148/159 (93.08%), Query Frame = 0 
Query:    1 AGSRWTVDTFRAFAPPGDIKVLETGCQGRCGLGPNILTRPSEEVYNGVAQPATVAAIIEASNEKWRHFGVPVADALVGAFGHVSKGDVLFKRGLFAEALVCYNQCIDTAGAFEGSTNALSVAKVKQSSAMRLLAKEGGRGSSRAAGTGSAAAAASVTLE 159
            AGSRWTVDTFRAFAPPGDIKVLETGCQGRCGLGPNILTRPSEEVYNGVAQPATVAAIIE        FGVPVAD LVGAFGHVSKGDVLFKRGLFAEAL CYNQCIDTAGAFEGSTNALSVAKVKQSSAMRLLAKEGGRGSSRAAGTGS AAAASVTLE
Sbjct:   56 AGSRWTVDTFRAFAPPGDIKVLETGCQGRCGLGPNILTRPSEEVYNGVAQPATVAAIIEID------FGVPVADTLVGAFGHVSKGDVLFKRGLFAEALACYNQCIDTAGAFEGSTNALSVAKVKQSSAMRLLAKEGGRGSSRAAGTGSTAAAASVTLE 208
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BLAST of mRNA_Ecto-sp13_S_contig18997.6022.1 vs. uniprot
Match: A0A7S2V0W4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.720e-14
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 0 
Query:    2 GSRWTVDTFRAFAPPGDIKVLETGCQGRCGLGPNILTRPSEEVYNGVAQPATVAAIIEASNEKWRHFGVPVADALVGAFGHVSKGDVLFKRGLFAEALVCYNQCIDTAGAFEGS 115
            G+  T + F A  PP ++++  TGCQG+CG GPN+   P  + Y GV QPATVAAI+E +       GV V D +V  +    K D L K+    +AL  Y+Q +  A A E +
Sbjct:   36 GASETYEVFEAMTPP-EMQISFTGCQGKCGSGPNVRVEPGAKDYAGVHQPATVAAILEIA------LGVVVDDVVVERYTDKMKADKLLKQRQPKKALEMYSQALAGAEAAEAT 142
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18997.6022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPE1_ECTSI1.230e-9393.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V0W4_9STRA3.720e-1439.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 3..74
e-value: 3.8E-7
score: 32.1
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 16..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18997contigEcto-sp13_S_contig18997:860..3152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18997.6022.1mRNA_Ecto-sp13_S_contig18997.6022.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18997 860..3152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18997.6022.1 ID=prot_Ecto-sp13_S_contig18997.6022.1|Name=mRNA_Ecto-sp13_S_contig18997.6022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=159bp
AGSRWTVDTFRAFAPPGDIKVLETGCQGRCGLGPNILTRPSEEVYNGVAQ
PATVAAIIEASNEKWRHFGVPVADALVGAFGHVSKGDVLFKRGLFAEALV
CYNQCIDTAGAFEGSTNALSVAKVKQSSAMRLLAKEGGRGSSRAAGTGSA
AAAASVTLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf