prot_Ecto-sp13_S_contig18995.6021.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18995.6021.1
Unique Nameprot_Ecto-sp13_S_contig18995.6021.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length248
Homology
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: D8LSC3_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC3_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 8.170e-120
Identity = 184/198 (92.93%), Postives = 188/198 (94.95%), Query Frame = 0
Query:    1 MQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVRCVNEPQSASISVKKAPTAHFAA 198
            MQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVRCV++        +KAP AH+ A
Sbjct:  125 MQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVRCVDQR-------RKAPAAHYIA 315          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: A0A6H5LBT5_9PHAE (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBT5_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 3.330e-62
Identity = 112/127 (88.19%), Postives = 113/127 (88.98%), Query Frame = 0
Query:    1 MQQFTLRAETLRDQRSQLGKHADQ------VSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQ 121
            MQQFTLRAETLRDQRSQLGKHADQ      VSLFLERFQLTP+EVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAG        KHQEAAYERLYRWVQDRCQTLEEETPAADVTLQ
Sbjct:  125 MQQFTLRAETLRDQRSQLGKHADQARGEKEVSLFLERFQLTPNEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAG--------KHQEAAYERLYRWVQDRCQTLEEETPAADVTLQ 243          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: A0A836CBI3_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI3_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.150e-43
Identity = 100/184 (54.35%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    1 MQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDE---VEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDR---CQTL--EEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVR 176
            M+QFT RA+ LR +R++L + A QV  FL  FQLTP+E   V A     EP   R FF+AL RL+   A C  LVGS  QSAGFELL+ LS+H E AYERLY WVQ R   CQ    +EETP AD TLQ AVR LR RP YY+HCQESIV+MRR+L+ QRFV  L   + +     M+  D VR
Sbjct:  129 MRQFTDRAQALRHRRAELSRRARQVERFLHTFQLTPEEAALVGAAGGLEEPAAARAFFAALARLRAAHARCTALVGS--QSAGFELLDALSRHLEGAYERLYHWVQARRVKCQEQLSDEETPQADGTLQVAVRALRARPAYYSHCQESIVSMRRRLVAQRFVAELAQARGAADGRAMEGIDCVR 310          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: A0A7S2S2C7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.080e-37
Identity = 88/197 (44.67%), Postives = 120/197 (60.91%), Query Frame = 0
Query:    1 MQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEAL-----SAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEET----------PAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQ--SSVRPIEMQAHDPVRCVNE 180
            MQ+FT RA  L ++R ++ +HA++VS FL ++ ++ +EVEAL            QG RFF AL RL+ VR  C RLVGS  QSA FELLE LS+ QE AY+R+Y WVQ R   ++  +           +A    + A+  LR RP ++ HCQE + + RR  LVQRF+ ALT G    + RPIE+QAHDPVR + +
Sbjct:   98 MQEFTKRANELTEKRKEVQQHAEEVSAFLSQYSMSDEEVEALLTLPIETPSADGQGIRFFHALGRLREVRDECCRLVGSKHQSAAFELLEVLSQQQEKAYDRVYEWVQQRANAMDGSSGDPFGIMDIDDSAHRVFREALTALRARPGFFRHCQECVASARRTGLVQRFIAALTIGGPGGTPRPIELQAHDPVRYLGD 294          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: A0A383VX96_TETOB (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VX96_TETOB)

HSP 1 Score: 131 bits (330), Expect = 2.630e-31
Identity = 74/157 (47.13%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   25 VSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTL-EEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSS--VRPIEMQAHDPVRCV 178
            V  FL+++QLTP+EV  L A      G  FF+AL R++++   C  L+ S+ Q AG EL++ ++ HQEAAYE L RWVQ  C++L E + P  D TL AAV  LRDRP+ + +C E +   R   L QRF++ALT G      RPIEM AHDP R V
Sbjct:  127 VEQFLDKYQLTPEEVAVLQAGRV---GPEFFAALSRVRSIHEHCRGLLRSAHQRAGLELMDAMAAHQEAAYEHLCRWVQAECRSLGENDAPEVDPTLTAAVAALRDRPVLFKYCAEEVAGARHGALFQRFIVALTRGGPGGLPRPIEMHAHDPRRYV 280          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: UPI000719C38B (conserved oligomeric Golgi complex subunit 6-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C38B)

HSP 1 Score: 130 bits (328), Expect = 3.850e-31
Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = 0
Query:   11 LRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSS--VRPIEMQAHDPVRCVNE 180
            L+ +  +L   A  V  FLERFQL P+EV+AL    +      FF AL R+K +   C  L+ +  Q+AG E++E ++ HQEAAYERLYRW Q  C+ L  + P  + TL  A+R L+DRP+ + +  E     RR  +V+ F+ ALT G      RPIE+ +HDP+R V +
Sbjct:  124 LQTETQRLEMRASVVDAFLERFQLKPEEVKALRGTRDGSLHDNFFDALRRVKQIHDDCKVLLRTKQQTAGLEIMEAMALHQEAAYERLYRWTQSECRVLNSDLPDINATLCQAMRALQDRPVLFTYSVEEFSTARRNAVVRGFIDALTRGGPGGVPRPIELHSHDPLRYVGD 295          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: A0A6J1C0T5_MOMCH (Conserved oligomeric Golgi complex subunit 6 n=8 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1C0T5_MOMCH)

HSP 1 Score: 127 bits (319), Expect = 7.550e-30
Identity = 67/159 (42.14%), Postives = 100/159 (62.89%), Query Frame = 0
Query:   25 VSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTL-EEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSS--VRPIEMQAHDPVRCVNE 180
            VS F+  +Q++ +E+ AL  +   D   +FF AL  ++ + A+C  L+ +  Q AG EL++ ++ +QEAAYERL RWVQ  C++L E + P     L+ AVRCLR+RP+ + +C E + NMR   L +RF+ ALT G      RPIE+ AHDP+R V +
Sbjct:  129 VSCFVRDYQISNEEINALRHE---DLNEKFFKALSHVQEIHANCKTLLRTHHQRAGLELMDMMAVYQEAAYERLCRWVQTECRSLGESDNPEVSELLKTAVRCLRERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGD 284          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: A0A2K1L2Q0_PHYPA (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L2Q0_PHYPA)

HSP 1 Score: 126 bits (317), Expect = 1.470e-29
Identity = 69/175 (39.43%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    9 ETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTL-EEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSS--VRPIEMQAHDPVRCVNE 180
            E L+ +     +  + ++ FL  +QL P+EV AL    E D    FF AL+R++ +  +C  L+ +  Q AG EL++ ++ +QEAAYERL RWVQ  C++L + +TP     L+AA + L+DRP+ + +C E + N R   L +RF+ ALT G      RPIE+ AHDP+R V +
Sbjct:  111 ERLKQELEHTTQRQELITAFLNNYQLRPEEVTALR---EEDISENFFKALMRVQEIHTNCKILLRTHHQRAGLELMDMMAVYQEAAYERLCRWVQAECRSLGDNDTPEVSDLLKAAAQSLKDRPVLFKYCAEEVANTRHNALFRRFITALTRGGPGGMPRPIEVHAHDPLRYVGD 282          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: W7T6J5_9STRA (Conserved oligomeric Golgi complex subunit 6 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6J5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.730e-29
Identity = 76/208 (36.54%), Postives = 116/208 (55.77%), Query Frame = 0
Query:    1 MQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQ----LEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAA-----DVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTS--------------GQSSV-----RPIEMQAHDPVRCVNE 180
            M  F  +   L+ Q+ +    A Q+  FL+ F L+  E+ AL  +    + PD  R FF+AL R + +R  CG LVGSS Q+ GFE+LE+LS+HQE A+ RL+ ++  RC  LE + P       DV L   +R +RDRP  + HCQE ++  R+ ++ +RF+ AL+               G+ S+     RPI+M +HDPVR +++
Sbjct:  118 MSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSD 325          
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Match: H3GJE3_PHYRM (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJE3_PHYRM)

HSP 1 Score: 125 bits (314), Expect = 4.550e-29
Identity = 74/178 (41.57%), Postives = 105/178 (58.99%), Query Frame = 0
Query:    2 QQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQGR-RFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSS--VRPIEMQAHDPVR 176
            QQ    A  L  +R+++     +   FL+R+QLT DEV AL A+   DQ    FFS L R++ V+A C  LV +   + G ELL+ + K+QEA +ERLY+W   +C  ++ E       L  A+  L DR  +Y +C+E + + RR L+V+RF+MALT G  +   RPIEM AHDPVR
Sbjct:  113 QQVQTEAAALASKRNKVQDEWKEAKTFLDRYQLTEDEVRALYAENLADQDMDAFFSTLERVQQVKADCKELVATGEVNCGLELLDAVGKYQEAGFERLYQWTAKKCAEVDGEPSNM---LHRAIALLSDRAEFYNYCKECLTSSRRSLIVRRFIMALTVGGPNGIPRPIEMHAHDPVR 287          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18995.6021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC3_ECTSI8.170e-12092.93Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A6H5LBT5_9PHAE3.330e-6288.19Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A836CBI3_9STRA2.150e-4354.35Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2S2C7_9STRA2.080e-3744.67Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A383VX96_TETOB2.630e-3147.13Conserved oligomeric Golgi complex subunit 6 n=2 T... [more]
UPI000719C38B3.850e-3141.28conserved oligomeric Golgi complex subunit 6-like ... [more]
A0A6J1C0T5_MOMCH7.550e-3042.14Conserved oligomeric Golgi complex subunit 6 n=8 T... [more]
A0A2K1L2Q0_PHYPA1.470e-2939.43Conserved oligomeric Golgi complex subunit 6 n=2 T... [more]
W7T6J5_9STRA2.730e-2936.54Conserved oligomeric Golgi complex subunit 6 n=5 T... [more]
H3GJE3_PHYRM4.550e-2941.57Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010490Conserved oligomeric Golgi complex subunit 6PFAMPF06419COG6coord: 3..178
e-value: 1.5E-50
score: 172.1
IPR010490Conserved oligomeric Golgi complex subunit 6PANTHERPTHR21506COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6coord: 2..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18995contigEcto-sp13_S_contig18995:578..3151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18995.6021.1mRNA_Ecto-sp13_S_contig18995.6021.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18995 170..3151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18995.6021.1 ID=prot_Ecto-sp13_S_contig18995.6021.1|Name=mRNA_Ecto-sp13_S_contig18995.6021.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=248bp
MQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQ
GRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYR
WVQDRCQTLEEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLV
QRFVMALTSGQSSVRPIEMQAHDPVRCVNEPQSASISVKKAPTAHFAAYL
GVTRVVLEAHRAGEGKRLENIAPPHTRKNILRRSWVTRDPKISSCLRT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010490COG6