prot_Ecto-sp13_S_contig18965.6009.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18965.6009.1
Unique Nameprot_Ecto-sp13_S_contig18965.6009.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 3.340e-70
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL
Sbjct:    9 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 119          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA)

HSP 1 Score: 180 bits (457), Expect = 3.310e-54
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N++V  QI YAT++GD  +CQA+S EL RYG K GLKNYAAAYCTGLL ARRLL+QL
Sbjct:    3 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQL 113          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: K8YST5_NANGC (60s ribosomal protein l5 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YST5_NANGC)

HSP 1 Score: 172 bits (437), Expect = 6.110e-53
Identity = 85/111 (76.58%), Postives = 96/111 (86.49%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            FVKV K K YFKRYQ KFRRRREGKTDYRARKR++ QDKNKYN+PKYRLVVRFTN++ +AQI+YATI GD  +  A+S EL RYG KVGLKNYAAAYCTGLL+ARRLL +L
Sbjct:    9 FVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKL 119          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: A0A7S2C5V7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5V7_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.660e-52
Identity = 88/111 (79.28%), Postives = 98/111 (88.29%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            FVKV K KAYFKRYQVKFRRRREGKTDYRARKRL+CQD+NKYN+PKYRLVVRF+NK  + QI+Y+ I GD  MC ASSTEL RYG KVGLKNYAAAYCTGLL ARRLL+++
Sbjct:    3 FVKVVKNKAYFKRYQVKFRRRREGKTDYRARKRLVCQDRNKYNTPKYRLVVRFSNKACICQIVYSEIVGDKVMCCASSTELGRYGLKVGLKNYAAAYCTGLLCARRLLKKI 113          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: D0NSE8_PHYIT (60S ribosomal protein L5 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NSE8_PHYIT)

HSP 1 Score: 171 bits (434), Expect = 2.610e-52
Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLI QDKNKYNSPKYRLVVR TNK V+ QI YA I GD  +CQA+S ELPRYG  VGLKNYAAAY TGLLV RR+L++L
Sbjct:   15 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQATSAELPRYGLTVGLKNYAAAYATGLLVGRRVLQKL 125          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: B7TJH5_ARTSF (Ribosomal protein L5 (Fragment) n=1 Tax=Artemia franciscana TaxID=6661 RepID=B7TJH5_ARTSF)

HSP 1 Score: 167 bits (422), Expect = 1.330e-51
Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLL 108
            FVKV K KAYFKR+QVKFRRRREGKTDY AR+RL+ QDKNKYN+PKYR+VVRFTNK ++ QI YA I+GDV +C A + ELPRYG KVGL NYAAAYCTGLL+ARRLL
Sbjct:    3 FVKVVKNKAYFKRFQVKFRRRREGKTDYYARRRLVIQDKNKYNTPKYRMVVRFTNKDIVCQIAYARIEGDVIVCAAYAHELPRYGIKVGLTNYAAAYCTGLLLARRLL 110          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.600e-51
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQ 110
            FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ QI YA I GD  +CQASSTEL RYG  VGLKNYAAAYCTGLL ARRLL++
Sbjct:   21 FVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQK 130          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: A9NKC3_PICSI (Ribosomal_L18_c domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NKC3_PICSI)

HSP 1 Score: 172 bits (436), Expect = 2.750e-51
Identity = 88/111 (79.28%), Postives = 99/111 (89.19%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            FVK QKT+AYFKR+QVKF+RRREGKTDYRAR RLI QDKNKYN+PKYRLVVRF+NK V+AQIIYAT+ GDV M  A S ELPRYG +VGL NYAAAYCTGLL+ARR+L+QL
Sbjct:    3 FVKAQKTRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRLVVRFSNKDVVAQIIYATLAGDVVMAAAYSRELPRYGLEVGLTNYAAAYCTGLLLARRVLKQL 113          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: A0A4D9DC45_9STRA (Ribosomal_L18_c domain-containing protein n=4 Tax=cellular organisms TaxID=131567 RepID=A0A4D9DC45_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.220e-51
Identity = 85/111 (76.58%), Postives = 96/111 (86.49%), Query Frame = 0
Query:    1 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            FVKV K K YFKRYQ KFRRRREGKTDYRARKR++ QDKNKYN+PKYRLVVRFTN++ +AQI+YATI GD  +  A+S EL RYG KVGLKNYAAAYCTGLL+ARRLL +L
Sbjct:    3 FVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKL 113          
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Match: A0A183ATC4_9TREM (Ribosomal_L18_c domain-containing protein n=3 Tax=Echinostomatoidea TaxID=404429 RepID=A0A183ATC4_9TREM)

HSP 1 Score: 172 bits (435), Expect = 4.100e-51
Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = 0
Query:    2 VKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 111
            VK+ K K+YFKRYQVKFRRRREGKTDY ARKRLI QDKNKYN+PKYRLVVRFTNK ++ QIIYA I GD  MC A + ELPRYG KVGL NYAAAYCTGLLVARRLLRQL
Sbjct:    4 VKLVKNKSYFKRYQVKFRRRREGKTDYFARKRLIWQDKNKYNTPKYRLVVRFTNKDIICQIIYARINGDRVMCTAYAHELPRYGVKVGLTNYAAAYCTGLLVARRLLRQL 113          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18965.6009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG3_9PHAE3.340e-70100.00Ribosomal_L18_c domain-containing protein n=2 Tax=... [more]
A0A836CBG0_9STRA3.310e-5480.18RL5, ribosomal protein 5 60S large ribosomal subun... [more]
K8YST5_NANGC6.110e-5376.5860s ribosomal protein l5 n=1 Tax=Nannochloropsis g... [more]
A0A7S2C5V7_9STRA1.660e-5279.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D0NSE8_PHYIT2.610e-5279.2860S ribosomal protein L5 n=1 Tax=Phytophthora infe... [more]
B7TJH5_ARTSF1.330e-5176.85Ribosomal protein L5 (Fragment) n=1 Tax=Artemia fr... [more]
A0A7S0BVS7_9STRA1.600e-5180.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A9NKC3_PICSI2.750e-5179.28Ribosomal_L18_c domain-containing protein n=1 Tax=... [more]
A0A4D9DC45_9STRA3.220e-5176.58Ribosomal_L18_c domain-containing protein n=4 Tax=... [more]
A0A183ATC4_9TREM4.100e-5180.91Ribosomal_L18_c domain-containing protein n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPRINTSPR00058RIBOSOMALL5coord: 18..37
score: 81.88
coord: 82..102
score: 81.55
coord: 41..60
score: 64.69
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPFAMPF17144Ribosomal_L5ecoord: 12..110
e-value: 3.0E-52
score: 176.9
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPANTHERPTHR23410RIBOSOMAL PROTEIN L5-RELATEDcoord: 1..111
NoneNo IPR availableGENE3D3.30.420.550coord: 1..111
e-value: 9.0E-57
score: 194.7
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 9..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18965contigEcto-sp13_S_contig18965:640..972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18965.6009.1mRNA_Ecto-sp13_S_contig18965.6009.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18965 640..972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18965.6009.1 ID=prot_Ecto-sp13_S_contig18965.6009.1|Name=mRNA_Ecto-sp13_S_contig18965.6009.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLV
VRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTG
LLVARRLLRQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005485Rbsml_L5_euk/L18_arc