prot_Ecto-sp13_S_contig1891.5982.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1891.5982.1
Unique Name	prot_Ecto-sp13_S_contig1891.5982.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	107

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: D7FXN4_ECTSI (Sar1A, Ras superfamily GTPase n=4 Tax=PX clade TaxID=569578 RepID=D7FXN4_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 2.960e-64
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0

Query:    3 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD
Sbjct:   15 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 111

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: A0A7S2V1B9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B9_9STRA)

HSP 1 Score: 196 bits (497), Expect = 5.860e-62
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0

Query:    3 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            G YHKSAKILFLGLDNAGKTTLLHMLKENRVQVH+PTLHPNQDELIVGKVRFKTFDLGGHETARKLW+DYFTTVDGVVFLVDALDR+RFPEAKKELD
Sbjct:   15 GLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHEPTLHPNQDELIVGKVRFKTFDLGGHETARKLWRDYFTTVDGVVFLVDALDRERFPEAKKELD 111

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: K8YVP7_NANGC (GTP-binding protein SAR1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVP7_NANGC)

HSP 1 Score: 188 bits (478), Expect = 6.240e-59
Identity = 86/99 (86.87%), Postives = 96/99 (96.97%), Query Frame = 0

Query:    1 MSGFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            ++G YHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPT+HPN DELI+GK+RFKTFDLGGHETAR+LWKDY TTVDGVVF+VDALD++RFPEAK+ELD
Sbjct:   23 LAGLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTIHPNTDELIIGKIRFKTFDLGGHETARRLWKDYLTTVDGVVFIVDALDQERFPEAKRELD 121

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: A0A7S1U8E4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8E4_9STRA)

HSP 1 Score: 183 bits (465), Expect = 9.680e-57
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 0

Query:    3 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            G YHKSAKILFLGLDNAGKTTLLHMLKENRVQVH+PTLHPNQDELIV  +RFKTFDLGGHETAR+LW+DYF TVDG+VFLVDA DR RFPEAK+ELD
Sbjct:   42 GLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHEPTLHPNQDELIVNNIRFKTFDLGGHETARRLWQDYFATVDGIVFLVDAFDRDRFPEAKEELD 138

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: B7FXX2_PHATC (Predicted protein n=7 Tax=Bacillariophyta TaxID=2836 RepID=B7FXX2_PHATC)

HSP 1 Score: 182 bits (461), Expect = 1.750e-56
Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = 0

Query:    3 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            G YHK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+G ++FKTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAKKELD
Sbjct:   15 GLYHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGNIKFKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKKELD 111

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: A0A7S2LHQ1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHQ1_9STRA)

HSP 1 Score: 182 bits (461), Expect = 3.360e-56
Identity = 84/97 (86.60%), Postives = 93/97 (95.88%), Query Frame = 0

Query:    3 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            G +HK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+GK++FKTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAKKELD
Sbjct:   35 GLHHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGKIKFKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKKELD 131

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: F0YAQ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ6_AURAN)

HSP 1 Score: 181 bits (459), Expect = 3.750e-56
Identity = 86/100 (86.00%), Postives = 94/100 (94.00%), Query Frame = 0

Query:    8 SAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELDVRPFLLYC 107
            SAKILFLGLDNAGKTTLLHMLKENRVQ+HQPTLHPNQDELI+G +RFKTFDLGGHETAR+LWKDYFTTVDGVV++VDALDR RFPEAK+ELD   +LL C
Sbjct:   20 SAKILFLGLDNAGKTTLLHMLKENRVQIHQPTLHPNQDELIIGNIRFKTFDLGGHETARRLWKDYFTTVDGVVYMVDALDRGRFPEAKRELD---YLLTC 116

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: A0A7R9ZN47_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZN47_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.100e-56
Identity = 84/98 (85.71%), Postives = 93/98 (94.90%), Query Frame = 0

Query:    2 SGFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            +G YHK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+G ++FKTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAKKELD
Sbjct:   54 AGLYHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGNIKFKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKKELD 151

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: A0A1E7FLB6_9STRA (Small GTP-binding protein sar1 n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FLB6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.090e-55
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 0

Query:    3 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            G YHK+AKILFLGLDNAGKTTLLHMLKENRVQVH PTLHPN DELI+G ++FKTFDLGGHETAR+LW DYFTTVDGVV++VD++DR RFPEAKKELD
Sbjct:   17 GLYHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELIIGNIKFKTFDLGGHETARRLWADYFTTVDGVVYIVDSIDRGRFPEAKKELD 113

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BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Match: B8BUA4_THAPS (Arf-type small G protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=B8BUA4_THAPS)

HSP 1 Score: 177 bits (448), Expect = 1.660e-54
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 0

Query:    3 GFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVGKVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELD 99
            G YHK+AKILFLGLDNAGKTTLLHMLKENRVQ H PTLHPN DELIVG+++ KTFDLGGHETAR+LW+DYFTTVDGVV+LVDA+DR RFPEAK+ELD
Sbjct:   15 GLYHKNAKILFLGLDNAGKTTLLHMLKENRVQAHVPTLHPNTDELIVGQLKLKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKRELD 111

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1891.5982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXN4_ECTSI	2.960e-64	100.00	Sar1A, Ras superfamily GTPase n=4 Tax=PX clade Tax...	[more]
A0A7S2V1B9_9STRA	5.860e-62	95.88	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
K8YVP7_NANGC	6.240e-59	86.87	GTP-binding protein SAR1 n=3 Tax=Monodopsidaceae T...	[more]
A0A7S1U8E4_9STRA	9.680e-57	87.63	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
B7FXX2_PHATC	1.750e-56	86.60	Predicted protein n=7 Tax=Bacillariophyta TaxID=28...	[more]
A0A7S2LHQ1_9STRA	3.360e-56	86.60	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
F0YAQ6_AURAN	3.750e-56	86.00	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7R9ZN47_9STRA	4.100e-56	85.71	Hypothetical protein n=2 Tax=Craspedostauros austr...	[more]
A0A1E7FLB6_9STRA	2.090e-55	84.54	Small GTP-binding protein sar1 n=3 Tax=Bacillariac...	[more]
B8BUA4_THAPS	1.660e-54	84.54	Arf-type small G protein n=5 Tax=Bacillariophyta T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 65..90 score: 61.54 coord: 10..33 score: 85.78 coord: 38..62 score: 62.12
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 6..99 e-value: 2.7E-39 score: 134.4
None	No IPR available	SMART	SM00178	sar_sub_1	coord: 1..107 e-value: 2.3E-20 score: 83.7
None	No IPR available	GENE3D	3.40.50.300		coord: 9..101 e-value: 6.9E-35 score: 122.1
None	No IPR available	PANTHER	PTHR45684	FAMILY NOT NAMED	coord: 3..100
None	No IPR available	PANTHER	PTHR45684:SF15		coord: 3..100
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..85 e-value: 7.5E-12 score: 43.3
IPR006687	Small GTPase superfamily, SAR1-type	PROSITE	PS51422	SAR1	coord: 2..107 score: 13.726
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1891	contig	Ecto-sp13_S_contig1891:14170..14847 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1891.5982.1	mRNA_Ecto-sp13_S_contig1891.5982.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1891 14143..14847 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1891.5982.1 ID=prot_Ecto-sp13_S_contig1891.5982.1|Name=mRNA_Ecto-sp13_S_contig1891.5982.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
MSGFYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQPTLHPNQDELIVG
KVRFKTFDLGGHETARKLWKDYFTTVDGVVFLVDALDRQRFPEAKKELDV
RPFLLYC

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006689	Small_GTPase_ARF/SAR
IPR005225	Small_GTP-bd_dom
IPR006687	Small_GTPase_SAR1
IPR027417	P-loop_NTPase