prot_Ecto-sp13_S_contig1890.5977.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1890.5977.1
Unique Nameprot_Ecto-sp13_S_contig1890.5977.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length311
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1890.5977.1 vs. uniprot
Match: D8LD57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD57_ECTSI)

HSP 1 Score: 495 bits (1275), Expect = 5.630e-165
Identity = 274/302 (90.73%), Postives = 278/302 (92.05%), Query Frame = 0 
Query:   10 IWRGVRGSLVGARDFFGHLKTYLGFYLREEVVMYPPLLEALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQAAREADHDLALWADDRPVLGYEEGPHXXXXXXXXXXXXXXXDPRSSTVMALGNSCFGSLEYPRELPSRVHMVGPLWMSSWTVDDQNHLNGGHRGESHFATGHHGDTGAGSPAKSKKGKDDDGGAKAXXXXXXPARKGFARDAAVAEGGDGAARGNEALEDVWSWLEPEGVKEDDAAPVVVVQ 311
            IWRGVRGSLVGARDFFGHLKTYLGFYLREE VMY PLLEALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQAAREADHDLA WA+DRPVLG EEGPHXXXXXXXXXXXXX  DPRSSTVMALGNSCFGSLEYPRELP+RVHMVGPLWMSSWTVDDQNH NGGHR E HFA+GHHG+TGAGSPAKSKK KD       XXXXX  ARKGFARD A  EGGDG ARGNEALEDVWSWLEPEGV EDDAAPVVVVQ
Sbjct:  250 IWRGVRGSLVGARDFFGHLKTYLGFYLREEAVMYAPLLEALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQAAREADHDLASWANDRPVLGSEEGPHXXXXXXXXXXXXX--DPRSSTVMALGNSCFGSLEYPRELPARVHMVGPLWMSSWTVDDQNHFNGGHRSEGHFASGHHGNTGAGSPAKSKKSKDXXXXXX-XXXXXATARKGFARDTAAMEGGDGTARGNEALEDVWSWLEPEGVGEDDAAPVVVVQ 548
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1890.5977.1 vs. uniprot
Match: A0A6H5K4N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4N1_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 1.670e-141
Identity = 238/268 (88.81%), Postives = 242/268 (90.30%), Query Frame = 0 
Query:   49 ALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQA---AREADHDLALWADDRPVLGYEEGPHXXXXXXXXXXXXXXX--DPRSSTVMALGNSCFGSLEYPRELPSRVHMVGPLWMSSWTVDDQNHLNGGHRGESHFATGHHGDTGAGSPAKSKKGKDDDGGAKAXXXXXXPARKGFARDAAVAEGGDGAARGNEALEDVWSWLEPEGVKEDDAAPVVVVQ 311
            ALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQA   AREADHDLA WADDRPVLG EEGPH      XXXXXXXXX  DPRSSTVMALGNSCFGSLEYPRELP+RVHMVGPLWMSSWTVDDQNHLNGG R ESHFATGHHG+TGAGSP KSK G+DDDGGAKA      PAR GFARDAAV EGGDGAARGNEALEDVWSWLEPEGV+ DDAAPVVVVQ
Sbjct:  268 ALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQARSAAREADHDLASWADDRPVLGSEEGPHHRHHQDXXXXXXXXXXHDPRSSTVMALGNSCFGSLEYPRELPARVHMVGPLWMSSWTVDDQNHLNGGRRSESHFATGHHGNTGAGSPVKSKPGEDDDGGAKAGGGAA-PARNGFARDAAVTEGGDGAARGNEALEDVWSWLEPEGVEGDDAAPVVVVQ 534
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1890.5977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD57_ECTSI5.630e-16590.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4N1_9PHAE1.670e-14188.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000coord: 15..217
e-value: 6.1E-6
score: 28.4
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 30..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1890contigEcto-sp13_S_contig1890:7885..12452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1890.5977.1mRNA_Ecto-sp13_S_contig1890.5977.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1890 7885..12454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1890.5977.1 ID=prot_Ecto-sp13_S_contig1890.5977.1|Name=mRNA_Ecto-sp13_S_contig1890.5977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
GGGWGAGLGIWRGVRGSLVGARDFFGHLKTYLGFYLREEVVMYPPLLEAL
RRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPY
TGFPLEGQTIGQRVHSSLFRLVLALSRMQAAREADHDLALWADDRPVLGY
EEGPHHHHHQDHHHHHHHQQDPRSSTVMALGNSCFGSLEYPRELPSRVHM
VGPLWMSSWTVDDQNHLNGGHRGESHFATGHHGDTGAGSPAKSKKGKDDD
GGAKAGGGGAAPARKGFARDAAVAEGGDGAARGNEALEDVWSWLEPEGVK
EDDAAPVVVVQ
back to top