prot_Ecto-sp13_S_contig1890.5976.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1890.5976.1
Unique Nameprot_Ecto-sp13_S_contig1890.5976.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length180
Homology
BLAST of mRNA_Ecto-sp13_S_contig1890.5976.1 vs. uniprot
Match: D8LD57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD57_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 3.030e-106
Identity = 169/180 (93.89%), Postives = 172/180 (95.56%), Query Frame = 0
Query:    1 MRTKIAHKDGGGKQQRREALPEVRAGLVLVKSKDVGRSRRPRRTWVLPVLRVLALAASMLCLTPTGGMVTGMSKMDAWSAGSEHEQQHEDRRPTGVWGQRQEHVVFVGVPEESAVLPLKALAQEMIGRGYRATLALPHGFQAWAEDIPGLSFLSLKPTGGASNSNATTHSHGPPATAPQH 180
            MRTKIA KDGGGK QRREALPEVRAGLVLVKSKDVGRSRRPRRTWVLPVLRVLALAASMLCLTPTGGMVTGMSKMDAWSAGS  EQQHEDRRPTGVWGQ+QEHVVFVGVPEE+AVLPLKALAQEMIGRGYRA+LALPHGFQAW EDIPGLSFLSLKPTGGA NSNATTHSHG PAT PQH
Sbjct:    1 MRTKIARKDGGGKHQRREALPEVRAGLVLVKSKDVGRSRRPRRTWVLPVLRVLALAASMLCLTPTGGMVTGMSKMDAWSAGSGPEQQHEDRRPTGVWGQQQEHVVFVGVPEETAVLPLKALAQEMIGRGYRASLALPHGFQAWVEDIPGLSFLSLKPTGGAPNSNATTHSHGTPATTPQH 180          
BLAST of mRNA_Ecto-sp13_S_contig1890.5976.1 vs. uniprot
Match: A0A6H5K4N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4N1_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 1.930e-102
Identity = 164/180 (91.11%), Postives = 167/180 (92.78%), Query Frame = 0
Query:    1 MRTKIAHKDGGGKQQRREALPEVRAGLVLVKSKDVGRSRRPRRTWVLPVLRVLALAASMLCLTPTGGMVTGMSKMDAWSAGSEHEQQHEDRRPTGVWGQRQEHVVFVGVPEESAVLPLKALAQEMIGRGYRATLALPHGFQAWAEDIPGLSFLSLKPTGGASNSNATTHSHGPPATAPQH 180
            MRTKIA KDGGGKQQRRE LPEVRAGLVLVKSKDVGRSRRPRRTWVLPVLRVLALAASMLCL+PTGGMVTGMSKMD WSA SE EQQHEDRRPTG WG RQEHVVFVGVPEE+AVLPLKALAQEMIGRGYRA+LALPHGFQAW EDIPGLSFLSLKPTG A NSNAT HSHGPPA  PQH
Sbjct:    1 MRTKIAQKDGGGKQQRRENLPEVRAGLVLVKSKDVGRSRRPRRTWVLPVLRVLALAASMLCLSPTGGMVTGMSKMDTWSAVSEPEQQHEDRRPTGAWGHRQEHVVFVGVPEENAVLPLKALAQEMIGRGYRASLALPHGFQAWVEDIPGLSFLSLKPTGEAPNSNATAHSHGPPAKTPQH 180          
BLAST of mRNA_Ecto-sp13_S_contig1890.5976.1 vs. uniprot
Match: W4H5Z0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5Z0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.050e-7
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  103 HVVFVGVPEESAVLPLKALAQEMIGRGYRATLALPHGFQAWAEDIPGLSFLSL 155
            +V  V +P    VLPLK LA+E++ RGYR ++A+P   ++W  D+PGL F+SL
Sbjct:  137 YVSMVSIPIMERVLPLKHLAEELLHRGYRVSIAMPEICRSWVSDVPGLEFISL 189          
BLAST of mRNA_Ecto-sp13_S_contig1890.5976.1 vs. uniprot
Match: A0A024UVN0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVN0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.420e-7
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  103 HVVFVGVPEESAVLPLKALAQEMIGRGYRATLALPHGFQAWAEDIPGLSFLSL 155
            +V  V +P    VLPLK LA+E++ RGYR ++A+P   ++W  D+PGL F+SL
Sbjct:  128 YVSMVSIPVMERVLPLKHLAEELLQRGYRVSVAMPEICRSWVSDVPGLEFISL 180          
BLAST of mRNA_Ecto-sp13_S_contig1890.5976.1 vs. uniprot
Match: W4H8I9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8I9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.440e-7
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  103 HVVFVGVPEESAVLPLKALAQEMIGRGYRATLALPHGFQAWAEDIPGLSFLSL 155
            +V  V +P    VLPLK LA+E++ RGYR ++A+P   ++W  D+PGL F+SL
Sbjct:  137 YVSMVSIPIMERVLPLKHLAEELLHRGYRVSIAMPEICRSWVSDVPGLEFISL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1890.5976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LD57_ECTSI3.030e-10693.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4N1_9PHAE1.930e-10291.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4H5Z0_9STRA4.050e-747.17Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A024UVN0_9STRA4.420e-747.17Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4H8I9_9STRA4.440e-747.17Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000coord: 82..179
e-value: 2.3E-6
score: 29.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..180
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1890contigEcto-sp13_S_contig1890:5129..7704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1890.5976.1mRNA_Ecto-sp13_S_contig1890.5976.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1890 5063..7704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1890.5976.1 ID=prot_Ecto-sp13_S_contig1890.5976.1|Name=mRNA_Ecto-sp13_S_contig1890.5976.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
MRTKIAHKDGGGKQQRREALPEVRAGLVLVKSKDVGRSRRPRRTWVLPVL
RVLALAASMLCLTPTGGMVTGMSKMDAWSAGSEHEQQHEDRRPTGVWGQR
QEHVVFVGVPEESAVLPLKALAQEMIGRGYRATLALPHGFQAWAEDIPGL
SFLSLKPTGGASNSNATTHSHGPPATAPQH
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