prot_Ecto-sp13_S_contig1889.5969.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1889.5969.1
Unique Nameprot_Ecto-sp13_S_contig1889.5969.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length178
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1889.5969.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.760e-98
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 0 
Query:   10 GLDEDEEDTPERNPGPDAAVLRAIKLRLEQWRKDNTKSVEQENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRRFLAHVHAISIAPPWVAALLTAMRVPTKNAVQVKKVIQEAIEVNKGLSTPKSVLEAMARSISPDIYKSFTARYTKDIALE 178
            GLDEDEEDTPERNPGPDAAV+RAIKLRLEQWRKDNTKSVEQENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRRFLAHVHAISIAPPWVAALLTAMRVPTKNAVQVKKVIQEAIEVNKGLSTPK VLEAMARSISPDIYKSFTARYTKDIALE
Sbjct:  540 GLDEDEEDTPERNPGPDAAVVRAIKLRLEQWRKDNTKSVEQENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRRFLAHVHAISIAPPWVAALLTAMRVPTKNAVQVKKVIQEAIEVNKGLSTPKPVLEAMARSISPDIYKSFTARYTKDIALE 708
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BLAST of mRNA_Ecto-sp13_S_contig1889.5969.1 vs. uniprot
Match: A0A6H5J6B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6B9_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.750e-51
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0 
Query:    1 LGGEAAAAAGLDEDEEDTPERNPGPDAAVLRAIKLRLEQWRKDNTKSVEQENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRR 99
            LGGEAA  AGLDEDEEDTPERNPGPDAAVLRAIKLRLEQWRKDNTK VEQENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRR
Sbjct:  695 LGGEAAXXAGLDEDEEDTPERNPGPDAAVLRAIKLRLEQWRKDNTKRVEQENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRR 793
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1889.5969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5K5_ECTSI1.760e-9898.82Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J6B9_9PHAE1.750e-5196.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1889contigEcto-sp13_S_contig1889:12995..15336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1889.5969.1mRNA_Ecto-sp13_S_contig1889.5969.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1889 12995..15337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1889.5969.1 ID=prot_Ecto-sp13_S_contig1889.5969.1|Name=mRNA_Ecto-sp13_S_contig1889.5969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp
LGGEAAAAAGLDEDEEDTPERNPGPDAAVLRAIKLRLEQWRKDNTKSVEQ
ENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRRF
LAHVHAISIAPPWVAALLTAMRVPTKNAVQVKKVIQEAIEVNKGLSTPKS
VLEAMARSISPDIYKSFTARYTKDIALE
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